CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38877	Canola	cytosol	96.68	93.1
Bra029160.1-P	Field mustard	cytosol	96.42	90.19
AT5G51760.1	Thale cress	cytosol	79.54	74.76
GSMUA_Achr11P...	Banana	cytosol	30.95	47.83
PGSC0003DMT400090149	Potato	cytosol	39.64	46.69
CDY18067	Canola	cytosol	6.91	45.76
GSMUA_Achr8P14370_001	Banana	cytosol	34.27	45.58
Solyc03g006940.1.1	Tomato	nucleus	38.87	44.06
Solyc03g006950.1.1	Tomato	cytosol, nucleus, peroxisome	38.11	42.94
Solyc03g006960.2.1	Tomato	nucleus	38.36	39.89
CDY45436	Canola	cytosol	36.57	39.07
CDY40181	Canola	cytosol	36.57	39.07
HORVU7Hr1G008520.2	Barley	cytosol	16.37	38.55
GSMUA_Achr11P...	Banana	cytosol	39.64	38.27
CDY33008	Canola	nucleus, plastid	38.36	37.97
CDX80307	Canola	nucleus, plastid	38.11	37.63
PGSC0003DMT400019552	Potato	cytosol, peroxisome, plastid	10.23	37.38
CDY50002	Canola	cytosol	16.11	36.84
TraesCS7D01G042300.1	Wheat	cytosol	34.27	36.22
CDY67227	Canola	cytosol	34.27	36.12
TraesCS7D01G042600.1	Wheat	cytosol	31.46	35.86
CDY67257	Canola	nucleus	34.02	35.85
CDY06705	Canola	nucleus	35.55	35.64
HORVU7Hr1G008370.1	Barley	cytosol, peroxisome	9.46	35.24
HORVU7Hr1G008470.2	Barley	cytosol	33.5	35.22
TraesCS2A01G000400.1	Wheat	cytosol, nucleus, peroxisome, plastid	39.13	35.17
TraesCS4A01G443400.1	Wheat	mitochondrion	32.48	34.6
TraesCS4A01G443500.1	Wheat	mitochondrion	32.48	34.6
HORVU7Hr1G008560.2	Barley	mitochondrion	21.23	34.16
CDY08530	Canola	nucleus	34.27	34.1
CDY01017	Canola	nucleus	34.02	33.84
HORVU2Hr1G000090.2	Barley	cytosol	39.13	33.7
TraesCS2B01G023600.1	Wheat	cytosol	39.39	33.48
CDX96761	Canola	cytosol	29.92	33.43
TraesCS7A01G048200.1	Wheat	plastid	31.2	33.33
CDY06259	Canola	nucleus	36.83	33.03
CDY10275	Canola	nucleus	36.32	33.02
TraesCS2D01G000300.1	Wheat	cytosol	37.85	32.6
CDX83901	Canola	cytosol	29.16	32.57
Zm00001d025055_P001	Maize	cytosol	38.36	32.33
CDY50003	Canola	nucleus	33.76	32.2
CDX92752	Canola	cytosol	33.5	31.95
CDX94382	Canola	cytosol	34.27	31.9
CDY38260	Canola	cytosol	34.27	31.75
CDY14318	Canola	nucleus	34.27	31.75
CDY42756	Canola	cytosol	33.5	31.72
EES11811	Sorghum	plastid	39.64	31.7
CDY54381	Canola	cytosol, mitochondrion, plastid	34.27	31.68
CDX89368	Canola	cytosol	34.27	31.46
HORVU7Hr1G008550.1	Barley	cytosol	17.9	30.97
Zm00001d004357_P001	Maize	nucleus	39.64	28.49
CDX72943	Canola	cytosol, peroxisome, plastid	32.99	27.16
Os04t0167875-00	Rice	nucleus, peroxisome, plastid	5.88	26.74
CDX96432	Canola	cytosol, peroxisome, plastid	32.74	26.45
CDY48313	Canola	cytosol	31.97	24.95
CDY26234	Canola	cytosol	31.46	24.8
CDY36606	Canola	nucleus	15.6	24.4
CDY53715	Canola	plasma membrane, vacuole	21.48	8.12
CDX93912	Canola	plasma membrane, vacuole	21.23	8.01

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.1	Gene3D:3.60.40.10	GO:A0A078H1U6	UniProt:A0A078H1U6
EnsemblPlants:CDY32620	ProteinID:CDY32620	ProteinID:CDY32620.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721
GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	EnsemblPlantsGene:GSBRNA2T00052649001
InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf
InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF532	SMART:SM00332
SUPFAM:SSF81606	UniParc:UPI0004EE45B3	SEG:seg	:	:	:

Description

BnaC03g15880DBnaC03g15880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H1U6]

Coordinates

chrLK032297:-:266444..269680

Molecular Weight (calculated)

42670.6 Da

IEP (calculated)

5.967

GRAVY (calculated)

-0.461

Length

391 amino acids

Sequence
(BLAST)

001: MTEIYRTVST GRRDDVSPTK CRERRRRRIE MRRQAAIYSG FVPLRKHART TTAAQAEMGG LPADVGCVFP SPASSHKKQE TLGWRGEETD DEPMYGVVSV
101: MGRSRKMEDT VTVKPSLCKP EINQQKPVHF FAVYDGHGGS QVSTLCSTTM HTLVKEELEQ PGCKLEGGGN DVVEEKWRGV MRRSFERTDE LAMGACMCRT
201: TASLCHCDPR EAAISGSTAV AAVLTNGNVV VANTGDSRAV LCRNGMAIPL SNDHKPDRPD ERARIEAAGG RVLVVDGARV EGILATSRAI AGDRYLKPMV
301: AWEPEVTFMR REPGDECLIL ASDGLWDVLS SQLACDIARF CLREDAPSGL DLNETATEDD NEGQGSSGQN PSRSVNDNIS VIVIDLKNSP P

Best Arabidopsis Sequence Match ( AT5G51760.1 )
(BLAST)

001: MTEIYRTIST GRGDDVSPTK CRERRRRRIE MRRQAAVFGE PSSSRNRDRT DMEVYSSFDV PLRKQARRSE IGGLPADIGG FLAPPAASSC QKSEAPVWKG
101: EETEDEPLYG IVSVMGRSRK MEDSVTVKPN LCKPEVNRQR PVHFFAVYDG HGGSQVSTLC STTMHTFVKE ELEQNLEEEE EGSENDVVER KWRGVMKRSF
201: KRMDEMATST CVCGTSVPLC NCDPREAAIS GSTAVTAVLT HDHIIVANTG DSRAVLCRNG MAIPLSNDHK PDRPDERARI EAAGGRVLVV DGARVEGILA
301: TSRAIGDRYL KPMVAWEPEV TFMRRESGDE CLVLASDGLW DVLSSQLACD IARFCLREET PSSLDLNRMA QEDDNDGEQN PSRSVLAATL LTRLALGRQS
401: SDNISVVVID LKNSSQ

Arabidopsis Description

AHG1Probable protein phosphatase 2C 75 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLI3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.