Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra013945.1-P | Field mustard | cytosol | 99.05 | 97.88 |
| CDX89368 | Canola | cytosol | 99.05 | 97.65 |
| CDY42756 | Canola | cytosol | 89.76 | 91.28 |
| CDX92752 | Canola | cytosol | 87.62 | 89.76 |
| CDY14318 | Canola | nucleus | 88.33 | 87.91 |
| CDY50003 | Canola | nucleus | 85.24 | 87.32 |
| CDY50002 | Canola | cytosol | 34.52 | 84.8 |
| AT4G26080.1 | Thale cress | cytosol, nucleus, plastid | 87.62 | 84.79 |
| CDY38260 | Canola | cytosol | 74.52 | 74.17 |
| CDY54381 | Canola | cytosol, mitochondrion, plastid | 73.57 | 73.05 |
| CDX96761 | Canola | cytosol | 42.14 | 50.57 |
| CDX83901 | Canola | cytosol | 41.19 | 49.43 |
| CDY18067 | Canola | cytosol | 6.9 | 49.15 |
| CDX72943 | Canola | cytosol, peroxisome, plastid | 50.0 | 44.21 |
| CDX96432 | Canola | cytosol, peroxisome, plastid | 49.76 | 43.18 |
| CDY67227 | Canola | cytosol | 37.38 | 42.32 |
| CDY67257 | Canola | nucleus | 37.14 | 42.05 |
| CDY26234 | Canola | cytosol | 48.81 | 41.33 |
| CDY40181 | Canola | cytosol | 35.48 | 40.71 |
| CDY45436 | Canola | cytosol | 35.48 | 40.71 |
| KRH19237 | Soybean | cytosol, nucleus, peroxisome | 51.67 | 40.49 |
| CDY48313 | Canola | cytosol | 48.1 | 40.32 |
| KRH37441 | Soybean | cytosol | 50.0 | 40.23 |
| KRH12454 | Soybean | cytosol | 50.48 | 40.23 |
| KRH02667 | Soybean | cytosol, nucleus, peroxisome | 51.19 | 39.96 |
| PGSC0003DMT400046382 | Potato | cytosol | 50.24 | 38.79 |
| CDY01017 | Canola | nucleus | 36.19 | 38.68 |
| CDY08530 | Canola | nucleus | 36.19 | 38.68 |
| CDY06705 | Canola | nucleus | 35.0 | 37.69 |
| Solyc07g040990.2.1 | Tomato | cytosol | 48.1 | 37.69 |
| CDX80307 | Canola | nucleus, plastid | 34.52 | 36.62 |
| CDY33008 | Canola | nucleus, plastid | 34.29 | 36.46 |
| CDY38877 | Canola | cytosol | 33.81 | 34.98 |
| CDY10275 | Canola | nucleus | 35.71 | 34.88 |
| CDY32620 | Canola | cytosol | 31.9 | 34.27 |
| CDY06259 | Canola | nucleus | 35.24 | 33.95 |
| CDY36606 | Canola | nucleus | 17.38 | 29.2 |
| CDY53715 | Canola | plasma membrane, vacuole | 23.33 | 9.47 |
| CDX93912 | Canola | plasma membrane, vacuole | 23.33 | 9.46 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:11.1.2.1.1.2 | MapMan:18.4.24.2.1 | Gene3D:3.60.40.10 | EnsemblPlants:CDX94382 |
| ProteinID:CDX94382 | ProteinID:CDX94382.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004721 | GO:GO:0004722 |
| GO:GO:0005488 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0043169 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00157501001 | InterPro:IPR001932 |
| InterPro:IPR036457 | PFAM:PF00481 | InterPro:PP2C | InterPro:PP2C_BS | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom |
| ScanProsite:PS01032 | PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF373 | SMART:SM00332 | SUPFAM:SSF81606 |
| UniParc:UPI00042F69CE | GO:X2C3J9 | UniProt:X2C3J9 | SEG:seg | : | : |
Description
BnaC01g18020DABA insensitive PP2C protein 1 [Source:UniProtKB/TrEMBL;Acc:X2C3J9]
Coordinates
chrLK031881:+:609994..612244
Molecular Weight (calculated)
46180.0 Da
IEP (calculated)
6.856
GRAVY (calculated)
-0.404
Length
420 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEVSPAVAM PFMPFPEQQM ELAGIMLGKG YCNGQYSSQD LENGSCSVSG SRKVLTSRIN SPNLNMKKES PSSSSSSSEI VVAGEEINGS DERSKKMISR
101: TESRSLFEFK SVPLYGVTSI CGRRPEMEDA VSTIPRFLQS PTNSMLDGRF NPQTTAHFFG VYDGHGGSQV ANYCRERMHL ALAEEIAKEK PMLCDGDTWQ
201: EKWKKALFNS FLRVDSEVES VAPETVGSTS VVAVVFPTHI FVANCGDSRA VLCRGKTALP LSTDHKPDRE DEAARIEGAG GKVIRWNGAR VFGVLAMSRS
301: IGDRYLKPSI IPDPEVTAVR RVKEDDCLIL ASDGVWDVMT DEEACEMARK RILLWHKKNA VAGDASLHTD ERRGEGKDPA AMSAAEYLSK LALQRGSKDN
401: ITVVVVDLKP QRKFKSKPLN
101: TESRSLFEFK SVPLYGVTSI CGRRPEMEDA VSTIPRFLQS PTNSMLDGRF NPQTTAHFFG VYDGHGGSQV ANYCRERMHL ALAEEIAKEK PMLCDGDTWQ
201: EKWKKALFNS FLRVDSEVES VAPETVGSTS VVAVVFPTHI FVANCGDSRA VLCRGKTALP LSTDHKPDRE DEAARIEGAG GKVIRWNGAR VFGVLAMSRS
301: IGDRYLKPSI IPDPEVTAVR RVKEDDCLIL ASDGVWDVMT DEEACEMARK RILLWHKKNA VAGDASLHTD ERRGEGKDPA AMSAAEYLSK LALQRGSKDN
401: ITVVVVDLKP QRKFKSKPLN
001: MEEVSPAIAG PFRPFSETQM DFTGIRLGKG YCNNQYSNQD SENGDLMVSL PETSSCSVSG SHGSESRKVL ISRINSPNLN MKESAAADIV VVDISAGDEI
101: NGSDITSEKK MISRTESRSL FEFKSVPLYG FTSICGRRPE MEDAVSTIPR FLQSSSGSML DGRFDPQSAA HFFGVYDGHG GSQVANYCRE RMHLALAEEI
201: AKEKPMLCDG DTWLEKWKKA LFNSFLRVDS EIESVAPETV GSTSVVAVVF PSHIFVANCG DSRAVLCRGK TALPLSVDHK PDREDEAARI EAAGGKVIQW
301: NGARVFGVLA MSRSIGDRYL KPSIIPDPEV TAVKRVKEDD CLILASDGVW DVMTDEEACE MARKRILLWH KKNAVAGDAS LLADERRKEG KDPAAMSAAE
401: YLSKLAIQRG SKDNISVVVV DLKPRRKLKS KPLN
101: NGSDITSEKK MISRTESRSL FEFKSVPLYG FTSICGRRPE MEDAVSTIPR FLQSSSGSML DGRFDPQSAA HFFGVYDGHG GSQVANYCRE RMHLALAEEI
201: AKEKPMLCDG DTWLEKWKKA LFNSFLRVDS EIESVAPETV GSTSVVAVVF PSHIFVANCG DSRAVLCRGK TALPLSVDHK PDREDEAARI EAAGGKVIQW
301: NGARVFGVLA MSRSIGDRYL KPSIIPDPEV TAVKRVKEDD CLILASDGVW DVMTDEEACE MARKRILLWH KKNAVAGDAS LLADERRKEG KDPAAMSAAE
401: YLSKLAIQRG SKDNISVVVV DLKPRRKLKS KPLN
Arabidopsis Description
ABI1Protein phosphatase 2C 56 [Source:UniProtKB/Swiss-Prot;Acc:P49597]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.