Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90028 | Canola | cytosol | 95.72 | 95.21 |
| CDY04688 | Canola | cytosol | 93.58 | 94.09 |
| AT1G01360.1 | Thale cress | cytosol | 90.91 | 90.91 |
| CDX74368 | Canola | cytosol | 80.21 | 77.72 |
| VIT_02s0025g01340.t01 | Wine grape | cytosol | 75.4 | 76.22 |
| CDX91871 | Canola | cytosol | 78.07 | 75.65 |
| PGSC0003DMT400012888 | Potato | cytosol | 68.98 | 72.88 |
| GSMUA_Achr10P... | Banana | cytosol | 72.19 | 72.58 |
| PGSC0003DMT400031686 | Potato | cytosol | 72.73 | 71.96 |
| Solyc08g082180.2.1 | Tomato | cytosol | 72.73 | 71.96 |
| Solyc12g055990.1.1 | Tomato | cytosol | 69.52 | 71.82 |
| CDY07165 | Canola | cytosol | 22.99 | 71.67 |
| CDY49462 | Canola | cytosol | 70.05 | 71.2 |
| CDY61488 | Canola | cytosol | 68.98 | 70.11 |
| CDY25052 | Canola | cytosol | 70.05 | 70.05 |
| CDY64350 | Canola | cytosol | 68.45 | 69.95 |
| HORVU0Hr1G032390.2 | Barley | cytosol, extracellular | 32.09 | 69.77 |
| GSMUA_AchrUn_... | Banana | cytosol | 68.98 | 69.35 |
| CDX96197 | Canola | cytosol | 69.52 | 69.15 |
| CDY38728 | Canola | cytosol | 67.38 | 68.48 |
| CDY53905 | Canola | cytosol | 68.45 | 68.45 |
| GSMUA_Achr2P19970_001 | Banana | cytosol | 67.91 | 68.28 |
| CDY27022 | Canola | cytosol | 68.45 | 68.09 |
| GSMUA_Achr10P... | Banana | cytosol | 67.38 | 67.74 |
| Zm00001d037719_P001 | Maize | cytosol | 68.45 | 64.97 |
| TraesCS1A01G126800.1 | Wheat | cytosol | 71.12 | 64.88 |
| TraesCS1D01G126900.1 | Wheat | cytosol | 71.12 | 64.88 |
| Os05t0213500-01 | Rice | cytosol, nucleus | 72.19 | 64.59 |
| EES17886 | Sorghum | cytosol | 67.91 | 64.47 |
| Zm00001d010445_P001 | Maize | cytosol | 67.91 | 64.47 |
| TraesCS1B01G145800.1 | Wheat | cytosol | 70.59 | 64.39 |
| Os02t0255500-01 | Rice | cytosol | 70.05 | 64.22 |
| GSMUA_Achr3P03480_001 | Banana | cytosol | 69.52 | 63.11 |
| CDX89219 | Canola | cytosol | 62.03 | 62.7 |
| CDY70517 | Canola | cytosol | 62.03 | 62.7 |
| EES04864 | Sorghum | cytosol | 70.59 | 62.56 |
| Zm00001d016105_P001 | Maize | cytosol | 70.59 | 62.26 |
| Zm00001d053396_P001 | Maize | cytosol | 68.98 | 59.45 |
| Zm00001d002533_P001 | Maize | cytosol | 39.04 | 57.94 |
| GSMUA_Achr2P15420_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 70.59 | 57.89 |
| GSMUA_Achr8P19910_001 | Banana | mitochondrion | 64.71 | 57.89 |
| Os02t0255300-00 | Rice | cytosol, plastid | 53.48 | 55.56 |
| TraesCS7B01G232100.1 | Wheat | cytoskeleton, cytosol, nucleus | 55.62 | 53.33 |
| HORVU7Hr1G079270.1 | Barley | cytosol | 56.15 | 53.3 |
| TraesCS7D01G328000.1 | Wheat | cytosol | 55.62 | 52.79 |
| TraesCS7A01G350800.1 | Wheat | cytosol | 54.01 | 51.27 |
| Os06t0528300-00 | Rice | cytosol | 56.15 | 50.97 |
| Os06t0527800-01 | Rice | cytosol | 55.62 | 50.49 |
| Os06t0526400-00 | Rice | cytosol | 50.8 | 48.47 |
| CDY58053 | Canola | cytosol | 40.11 | 46.3 |
| CDY68675 | Canola | cytosol | 40.11 | 46.3 |
| HORVU1Hr1G030390.2 | Barley | extracellular, mitochondrion, plasma membrane | 71.12 | 45.7 |
| CDX91449 | Canola | plastid | 48.66 | 43.96 |
| CDY54453 | Canola | plastid | 48.13 | 43.27 |
| CDY54415 | Canola | cytosol | 47.06 | 43.14 |
| CDY18391 | Canola | plastid | 47.06 | 43.14 |
| HORVU3Hr1G054230.1 | Barley | mitochondrion | 35.83 | 42.14 |
| CDY04951 | Canola | cytosol | 44.38 | 42.13 |
| CDY14471 | Canola | plastid | 46.52 | 42.03 |
| CDY07739 | Canola | plastid | 46.52 | 42.03 |
| CDX78879 | Canola | cytosol | 36.9 | 41.57 |
| CDX99450 | Canola | cytosol | 36.9 | 41.57 |
| CDY58019 | Canola | cytosol | 36.9 | 41.57 |
| CDX90440 | Canola | cytosol | 42.25 | 41.36 |
| CDY01498 | Canola | cytosol | 42.25 | 41.36 |
| CDX70150 | Canola | cytosol | 44.92 | 41.18 |
| CDX98844 | Canola | cytosol | 44.92 | 41.18 |
| CDX93191 | Canola | cytosol | 43.85 | 40.39 |
| CDY72318 | Canola | cytosol | 43.85 | 40.39 |
| CDY69797 | Canola | cytosol | 41.18 | 40.31 |
| CDY52923 | Canola | cytosol | 43.85 | 40.0 |
| CDY24911 | Canola | cytosol, mitochondrion | 45.45 | 39.91 |
| CDX80959 | Canola | cytosol | 43.32 | 39.9 |
| CDY70860 | Canola | cytosol | 39.57 | 39.78 |
| CDY07608 | Canola | cytosol, mitochondrion | 44.38 | 39.15 |
| CDY11503 | Canola | cytosol | 39.04 | 38.83 |
| CDX76731 | Canola | cytosol | 37.97 | 37.77 |
| CDX74796 | Canola | cytosol, nucleus, plastid | 42.25 | 37.26 |
| CDY18867 | Canola | cytosol, mitochondrion, nucleus, plastid | 41.71 | 36.79 |
| CDY58505 | Canola | nucleus | 41.18 | 36.67 |
| CDX77691 | Canola | nucleus | 41.18 | 35.81 |
| CDY08877 | Canola | cytosol | 29.41 | 35.48 |
| CDX76554 | Canola | cytosol | 29.41 | 35.48 |
| CDY68316 | Canola | nucleus | 35.29 | 34.55 |
| CDY03194 | Canola | nucleus | 34.22 | 33.51 |
| CDY48030 | Canola | plastid | 35.83 | 32.68 |
| CDY22516 | Canola | plastid | 35.29 | 32.2 |
| CDX82120 | Canola | plastid | 35.29 | 32.2 |
| Os06t0526466-00 | Rice | cytosol, mitochondrion | 20.86 | 28.26 |
Protein Annotations
| EnsemblPlants:CDY15183 | EnsemblPlantsGene:GSBRNA2T00085367001 | Gene3D:3.30.530.20 | InterPro:IPR023393 | InterPro:Polyketide_cyclase/dehydratase | InterPro:START-like_dom_sf |
| PANTHER:PTHR31213 | PANTHER:PTHR31213:SF4 | PFAM:PF10604 | ProteinID:CDY15183 | ProteinID:CDY15183.1 | SUPFAM:SSF55961 |
| UniParc:UPI0004EEDB73 | UniProt:A0A078FSB7 | MapMan:11.1.2.1.1.1 | : | : | : |
Description
BnaC05g00620DBnaC05g00620D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FSB7]
Coordinates
chrLK032052:-:331708..332931
Molecular Weight (calculated)
21035.1 Da
IEP (calculated)
6.415
GRAVY (calculated)
-0.332
Length
187 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGGTEMYGG LETMQYVRRH HQHSCREDQC TSALVKHIKA PLHLVWSVVR RFDEPQKYKP FVSRCTVIGD PEIGSLREVN VKSGLPATTS TERLELLDED
101: EHILGIKIIG GDHRLKNYSS IVTVHPEIIE GRPGTMVIES FVVDVPQGNT KDETCYFVEA LIRCNLKSLA HVSERLASQD NITSFST
101: EHILGIKIIG GDHRLKNYSS IVTVHPEIIE GRPGTMVIES FVVDVPQGNT KDETCYFVEA LIRCNLKSLA HVSERLASQD NITSFST
001: MMDGVEGGTA MYGGLETVQY VRTHHQHLCR ENQCTSALVK HIKAPLHLVW SLVRRFDQPQ KYKPFVSRCT VIGDPEIGSL REVNVKSGLP ATTSTERLEL
101: LDDEEHILGI KIIGGDHRLK NYSSILTVHP EIIEGRAGTM VIESFVVDVP QGNTKDETCY FVEALIRCNL KSLADVSERL ASQDITQ
101: LDDEEHILGI KIIGGDHRLK NYSSILTVHP EIIEGRAGTM VIESFVVDVP QGNTKDETCY FVEALIRCNL KSLADVSERL ASQDITQ
Arabidopsis Description
PYL9RCAR1 [Source:UniProtKB/TrEMBL;Acc:A0A178W4H4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.