CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY64350	Canola	cytosol	98.37	98.91
Bra029093.1-P	Field mustard	cytosol	98.37	98.37
CDY61488	Canola	cytosol	89.67	89.67
AT5G53160.2	Thale cress	cytosol, nucleus, peroxisome	91.3	89.36
CDY49462	Canola	cytosol	88.59	88.59
CDX96197	Canola	cytosol	88.04	86.17
CDY27022	Canola	cytosol	86.96	85.11
VIT_16s0050g02620.t01	Wine grape	cytosol	77.72	77.3
Solyc03g007310.2.1	Tomato	cytosol	76.63	76.22
PGSC0003DMT400023511	Potato	cytosol	76.63	76.22
KRH65845	Soybean	cytosol	77.72	74.09
KRH18155	Soybean	cytosol	76.09	73.3
CDY70517	Canola	cytosol	71.74	71.35
CDX89219	Canola	cytosol	71.2	70.81
GSMUA_Achr10P...	Banana	cytosol	70.11	69.35
KRH53449	Soybean	cytosol	71.2	68.59
CDY25052	Canola	cytosol	69.57	68.45
GSMUA_Achr2P19970_001	Banana	cytosol	69.02	68.28
CDY15183	Canola	cytosol	68.48	67.38
GSMUA_Achr10P...	Banana	cytosol	67.93	67.2
CDY04688	Canola	cytosol	67.93	67.2
HORVU0Hr1G032390.2	Barley	cytosol, extracellular	30.98	66.28
GSMUA_AchrUn_...	Banana	cytosol	66.85	66.13
CDX90028	Canola	cytosol	66.85	65.43
CDX74368	Canola	cytosol	67.93	64.77
CDX91871	Canola	cytosol	67.39	64.25
CDY53905	Canola	cytosol	65.22	64.17
Os02t0255500-01	Rice	cytosol	70.65	63.73
CDY07165	Canola	cytosol	20.65	63.33
GSMUA_Achr3P03480_001	Banana	cytosol	70.65	63.11
TraesCS1D01G126900.1	Wheat	cytosol	68.48	61.46
TraesCS1B01G145800.1	Wheat	cytosol	68.48	61.46
TraesCS1A01G126800.1	Wheat	cytosol	68.48	61.46
Os05t0213500-01	Rice	cytosol, nucleus	69.02	60.77
EES17886	Sorghum	cytosol	64.67	60.41
Zm00001d016105_P001	Maize	cytosol	69.57	60.38
Zm00001d037719_P001	Maize	cytosol	64.13	59.9
Zm00001d010445_P001	Maize	cytosol	64.13	59.9
EES04864	Sorghum	cytosol	67.93	59.24
GSMUA_Achr8P19910_001	Banana	mitochondrion	66.85	58.85
Zm00001d053396_P001	Maize	cytosol	66.3	56.22
KRH65286	Soybean	cytosol	27.17	54.95
GSMUA_Achr2P15420_001	Banana	cytosol, mitochondrion, nucleus, plastid	67.93	54.82
Zm00001d002533_P001	Maize	cytosol	36.96	53.97
Os02t0255300-00	Rice	cytosol, plastid	52.17	53.33
KRH16733	Soybean	cytosol	30.43	53.33
TraesCS7B01G232100.1	Wheat	cytoskeleton, cytosol, nucleus	54.89	51.79
HORVU7Hr1G079270.1	Barley	cytosol	54.35	50.76
Os06t0527800-01	Rice	cytosol	56.52	50.49
Os06t0528300-00	Rice	cytosol	56.52	50.49
TraesCS7D01G328000.1	Wheat	cytosol	52.72	49.24
Os06t0526400-00	Rice	cytosol	52.17	48.98
TraesCS7A01G350800.1	Wheat	cytosol	51.63	48.22
HORVU1Hr1G030390.2	Barley	extracellular, mitochondrion, plasma membrane	68.48	43.3
CDY58053	Canola	cytosol	37.5	42.59
CDY68675	Canola	cytosol	37.5	42.59
HORVU3Hr1G054230.1	Barley	mitochondrion	36.41	42.14
CDX91449	Canola	plastid	46.74	41.55
CDY69797	Canola	cytosol	42.93	41.36
CDX70150	Canola	cytosol	45.65	41.18
CDX98844	Canola	cytosol	45.65	41.18
CDY04951	Canola	cytosol	44.02	41.12
CDY11503	Canola	cytosol	41.85	40.96
CDX76731	Canola	cytosol	41.85	40.96
CDY54453	Canola	plastid	46.2	40.87
CDY01498	Canola	cytosol	42.39	40.84
CDX90440	Canola	cytosol	42.39	40.84
CDY18391	Canola	plastid	45.11	40.69
CDY54415	Canola	cytosol	45.11	40.69
CDY14471	Canola	plastid	45.65	40.58
CDY07739	Canola	plastid	45.65	40.58
CDY72318	Canola	cytosol	44.57	40.39
CDY70860	Canola	cytosol	40.76	40.32
CDX80959	Canola	cytosol	44.02	39.9
CDY58505	Canola	nucleus	44.57	39.05
CDX76554	Canola	cytosol	32.61	38.71
CDX78879	Canola	cytosol	34.78	38.55
CDY58019	Canola	cytosol	34.78	38.55
CDX99450	Canola	cytosol	34.78	38.55
CDX77691	Canola	nucleus	44.57	38.14
CDY08877	Canola	cytosol	32.07	38.06
CDX93191	Canola	cytosol	41.3	37.44
CDY52923	Canola	cytosol	41.3	37.07
CDY24911	Canola	cytosol, mitochondrion	42.39	36.62
CDY07608	Canola	cytosol, mitochondrion	41.85	36.32
CDY48030	Canola	plastid	40.22	36.1
CDY22516	Canola	plastid	39.67	35.61
CDX82120	Canola	plastid	39.67	35.61
CDX74796	Canola	cytosol, nucleus, plastid	40.22	34.91
CDY68316	Canola	nucleus	35.87	34.55
CDY18867	Canola	cytosol, mitochondrion, nucleus, plastid	39.67	34.43
CDY03194	Canola	nucleus	35.33	34.03
Os06t0526466-00	Rice	cytosol, mitochondrion	22.83	30.43

Protein Annotations

EnsemblPlants:CDY38728	EnsemblPlantsGene:GSBRNA2T00066509001	Gene3D:3.30.530.20	InterPro:IPR023393	InterPro:Polyketide_cyclase/dehydratase	InterPro:START-like_dom_sf
PANTHER:PTHR31213	PANTHER:PTHR31213:SF12	PFAM:PF10604	ProteinID:CDY38728	ProteinID:CDY38728.1	SUPFAM:SSF55961
UniParc:UPI0004EB8E9D	UniProt:A0A078HPK9	MapMan:11.1.2.1.1.1	:	:	:

Description

BnaC03g15210DBnaC03g15210D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HPK9]

Coordinates

chrLK032431:+:111549..113777

Molecular Weight (calculated)

20797.9 Da

IEP (calculated)

6.716

GRAVY (calculated)

-0.367

Length

184 amino acids

Sequence
(BLAST)

001: MEANGTEMNQ EREYIRRHHK HALLENQCSS TLVKHIQAPV HIVWSLVRRF DQPQKYKPFI SKCVVKGNME IGTVREVDVK SGLPATRSTE RLELLDENEH
101: ILSMRIVGGD HRLKNYSSVI SLHPETIEGG RIGTLVIESF VVDVPEGNTN DETCYFVEAL IKCNLKSLAD ISQRLAVQDT TAST

Best Arabidopsis Sequence Match ( AT5G53160.2 )
(BLAST)

001: MEANGIENLT NPNQEREFIR RHHKHELVDN QCSSTLVKHI NAPVHIVWSL VRRFDQPQKY KPFISRCVVK GNMEIGTVRE VDVKSGLPAT RSTERLELLD
101: DNEHILSIRI VGGDHRLKNY SSIISLHPET IEGRIGTLVI ESFVVDVPEG NTKDETCYFV EALIKCNLKS LADISERLAV QDTTESRV

Arabidopsis Description

PYL8RCAR3 [Source:UniProtKB/TrEMBL;Acc:A0A178UJN3]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.