CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 5
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra017125.1-P	Field mustard	plastid	100.0	100.0
CDY54415	Canola	cytosol	99.51	99.51
CDX91449	Canola	plastid	94.12	92.75
CDY54453	Canola	plastid	93.14	91.35
CDY07739	Canola	plastid	92.16	90.82
CDY14471	Canola	plastid	92.16	90.82
KRH00319	Soybean	cytosol	61.76	71.19
KRH49452	Soybean	plastid	60.29	69.1
TraesCS4A01G114400.1	Wheat	cytosol	55.39	63.13
Solyc10g085310.1.1	Tomato	plastid	65.2	62.44
Solyc09g015380.1.1	Tomato	plastid	61.27	62.19
PGSC0003DMT400028658	Potato	nucleus	64.71	61.97
Solyc10g076410.1.1	Tomato	plastid	59.8	60.1
VIT_13s0067g01940.t01	Wine grape	plastid	62.25	59.91
PGSC0003DMT400041080	Potato	mitochondrion	60.78	59.9
PGSC0003DMT400075056	Potato	plastid	62.25	59.35
KRH76014	Soybean	cytosol	62.75	59.26
VIT_08s0058g00470.t01	Wine grape	plastid	65.69	59.03
TraesCS1B01G306800.1	Wheat	mitochondrion	55.88	58.76
TraesCS1A01G297600.1	Wheat	mitochondrion	56.86	57.71
TraesCS1D01G293600.1	Wheat	mitochondrion, plastid	56.37	57.21
Zm00001d038436_P001	Maize	plastid	55.88	57.0
CDX98844	Canola	cytosol	56.86	56.86
CDY04951	Canola	cytosol	54.9	56.85
HORVU1Hr1G070420.1	Barley	mitochondrion	55.88	56.72
GSMUA_Achr9P04600_001	Banana	cytosol	39.71	56.64
CDX70150	Canola	cytosol	56.37	56.37
GSMUA_Achr6P32790_001	Banana	cytosol	57.84	55.92
TraesCS3A01G348400.1	Wheat	plastid	56.37	55.83
HORVU3Hr1G088100.1	Barley	plastid	56.37	55.83
HORVU3Hr1G039010.1	Barley	plastid	56.37	55.83
TraesCS3D01G342000.1	Wheat	plastid	56.37	55.83
TraesCS3B01G380300.1	Wheat	mitochondrion, plastid	56.37	55.56
CDX93191	Canola	cytosol	54.9	55.17
CDY72318	Canola	cytosol	54.9	55.17
CDY52923	Canola	cytosol	55.39	55.12
CDX74796	Canola	cytosol, nucleus, plastid	56.86	54.72
CDX80959	Canola	cytosol	54.41	54.68
CDY68675	Canola	cytosol	43.14	54.32
CDY58053	Canola	cytosol	43.14	54.32
TraesCS2D01G087500.1	Wheat	plastid	56.86	54.21
Os05t0473000-01	Rice	cytosol	57.35	53.92
TraesCS2B01G105300.1	Wheat	plastid	57.35	53.92
EES19683	Sorghum	plastid	56.86	53.7
Zm00001d047705_P001	Maize	plastid	56.86	53.21
EER92405	Sorghum	plastid	57.84	53.15
TraesCS4D01G191200.1	Wheat	cytosol	57.84	52.68
TraesCS4B01G189800.1	Wheat	cytosol	57.84	52.68
HORVU4Hr1G055220.1	Barley	cytosol	57.35	52.23
CDY18867	Canola	cytosol, mitochondrion, nucleus, plastid	53.92	51.89
Zm00001d028793_P001	Maize	cytosol, mitochondrion, plastid	55.88	51.82
Os03t0297600-01	Rice	cytosol	57.84	51.53
GSMUA_AchrUn_...	Banana	plastid	39.71	51.27
CDX99450	Canola	cytosol	41.67	51.2
CDY58019	Canola	cytosol	41.67	51.2
CDX78879	Canola	cytosol	41.67	51.2
CDY24911	Canola	cytosol, mitochondrion	53.43	51.17
GSMUA_Achr9P17980_001	Banana	cytosol	37.25	51.01
CDY07608	Canola	cytosol, mitochondrion	52.94	50.94
Zm00001d043014_P001	Maize	cytosol	52.45	50.23
CDX90440	Canola	cytosol	46.57	49.74
CDY01498	Canola	cytosol	46.57	49.74
CDY70860	Canola	cytosol	45.1	49.46
GSMUA_Achr5P29490_001	Banana	plastid	39.22	49.38
GSMUA_Achr11P...	Banana	cytosol, plastid	37.25	48.1
CDY69797	Canola	cytosol	44.61	47.64
CDY11503	Canola	cytosol	43.63	47.34
CDX76731	Canola	cytosol	43.63	47.34
GSMUA_Achr8P21220_001	Banana	cytosol	39.22	47.06
CDY15183	Canola	cytosol	43.14	47.06
CDX90028	Canola	cytosol	43.14	46.81
CDY04688	Canola	cytosol	42.65	46.77
CDY49462	Canola	cytosol	41.67	46.2
CDY61488	Canola	cytosol	41.67	46.2
CDX89219	Canola	cytosol	41.18	45.41
CDY64350	Canola	cytosol	40.69	45.36
CDX96197	Canola	cytosol	41.67	45.21
CDY38728	Canola	cytosol	40.69	45.11
CDY25052	Canola	cytosol	41.18	44.92
CDY58505	Canola	nucleus	46.08	44.76
CDY53905	Canola	cytosol	40.69	44.38
CDY70517	Canola	cytosol	40.2	44.32
CDY27022	Canola	cytosol	40.69	44.15
Os01t0827800-00	Rice	plastid	55.39	44.14
CDX77691	Canola	nucleus	46.08	43.72
CDX74368	Canola	cytosol	41.18	43.52
GSMUA_Achr10P...	Banana	cytosol, plastid	42.16	43.43
CDX76554	Canola	cytosol	32.84	43.23
CDY08877	Canola	cytosol	32.35	42.58
CDX91871	Canola	cytosol	40.2	42.49
TraesCS2A01G089400.1	Wheat	plastid	56.86	40.56
CDX82120	Canola	plastid	40.69	40.49
CDY48030	Canola	plastid	40.69	40.49
CDY22516	Canola	plastid	40.69	40.49
CDY03194	Canola	nucleus	37.75	40.31
CDY68316	Canola	nucleus	37.75	40.31
CDY07165	Canola	cytosol	11.76	40.0
OQU87775	Sorghum	endoplasmic reticulum, extracellular	50.0	37.5
Zm00001d012475_P001	Maize	cytosol	51.96	33.97

Protein Annotations

EnsemblPlants:CDY18391	EnsemblPlantsGene:GSBRNA2T00005379001	Gene3D:3.30.530.20	InterPro:IPR023393	InterPro:Polyketide_cyclase/dehydratase	InterPro:START-like_dom_sf
PANTHER:PTHR31213	PANTHER:PTHR31213:SF48	PFAM:PF10604	ProteinID:CDY18391	ProteinID:CDY18391.1	SEG:seg
SUPFAM:SSF55961	UniParc:UPI000254480F	UniProt:A0A078FZA9	MapMan:11.1.2.1.1.1	:	:

Description

BnaA04g21960DBnaA04g21960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FZA9]

Coordinates

chrLK032085:-:198179..199045

Molecular Weight (calculated)

21990.0 Da

IEP (calculated)

6.710

GRAVY (calculated)

-0.113

Length

204 amino acids

Sequence
(BLAST)

001: MLAVHRPSSA VSDGDTVQIP TMVQKRFPSL SRDATAARFH THEVGPNQCC SAVIQEISAP ISTVWSVVRR FDNPQAYKHF LKSCSVIDGD GGNVGSLRQV
101: HVVSGLPAAS STERLDILDD ERHVISFSVV GGDHRLSNYR SVTTLHSSPV SGTVVVESYV VDVPPGNTKE ETCDFVDVIV RCNLQSLAKI AEISAAEGNK
201: KTSM

Best Arabidopsis Sequence Match ( AT2G38310.1 )
(BLAST)

001: MLAVHRPSSA VSDGDSVQIP MMIASFQKRF PSLSRDSTAA RFHTHEVGPN QCCSAVIQEI SAPISTVWSV VRRFDNPQAY KHFLKSCSVI GGDGDNVGSL
101: RQVHVVSGLP AASSTERLDI LDDERHVISF SVVGGDHRLS NYRSVTTLHP SPISGTVVVE SYVVDVPPGN TKEETCDFVD VIVRCNLQSL AKIAENTAAE
201: SKKKMSL

Arabidopsis Description

PYL4Abscisic acid receptor PYL4 [Source:UniProtKB/Swiss-Prot;Acc:O80920]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.