Factsheet for GSMUA_Achr9P04600_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 4
plastid 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...
GSMUA_Achr1P19740_001
GSMUA_Achr3P26270_001
GSMUA_Achr5P29000_001
GSMUA_Achr6P15180_001
GSMUA_Achr7P24000_001
GSMUA_Achr8P05700_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G38310.1	GSMUA_Achr3P26270_001	AT1G72770.1	19407142
AT2G38310.1	GSMUA_Achr7P24000_001	AT1G72770.1	19407142
AT2G38310.1	GSMUA_Achr8P05700_001	AT1G72770.1	19407142
AT2G38310.1	GSMUA_Achr3P26270_001	AT1G72770.1	19624469
AT2G38310.1	GSMUA_Achr7P24000_001	AT1G72770.1	19624469
AT2G38310.1	GSMUA_Achr8P05700_001	AT1G72770.1	19624469
AT2G38310.1	GSMUA_Achr11P...	AT3G11410.1	19407142
AT2G38310.1	GSMUA_Achr5P29000_001	AT3G11410.1	19407142
AT2G38310.1	GSMUA_Achr6P15180_001	AT3G11410.1	19407142
AT2G38310.1	GSMUA_AchrUn_...	AT3G11410.1	19407142
AT2G38310.1	GSMUA_Achr11P...	AT5G59220.1	19407142
AT2G38310.1	GSMUA_Achr5P29000_001	AT5G59220.1	19407142
AT2G38310.1	GSMUA_Achr6P15180_001	AT5G59220.1	19407142
AT2G38310.1	GSMUA_AchrUn_...	AT5G59220.1	19407142
AT2G40330.1	GSMUA_Achr3P26270_001	AT1G72770.1	19407142
AT2G40330.1	GSMUA_Achr7P24000_001	AT1G72770.1	19407142
AT2G40330.1	GSMUA_Achr8P05700_001	AT1G72770.1	19407142
AT2G40330.1	GSMUA_Achr3P26270_001	AT1G72770.1	19624469
AT2G40330.1	GSMUA_Achr7P24000_001	AT1G72770.1	19624469
AT2G40330.1	GSMUA_Achr8P05700_001	AT1G72770.1	19624469
AT2G40330.1	GSMUA_Achr1P19740_001	AT2G20000.1	17944809
AT5G05440.1	GSMUA_Achr3P26270_001	AT1G72770.1	19407142
AT5G05440.1	GSMUA_Achr7P24000_001	AT1G72770.1	19407142
AT5G05440.1	GSMUA_Achr8P05700_001	AT1G72770.1	19407142
AT5G05440.1	GSMUA_Achr3P26270_001	AT1G72770.1	19624469
AT5G05440.1	GSMUA_Achr7P24000_001	AT1G72770.1	19624469
AT5G05440.1	GSMUA_Achr8P05700_001	AT1G72770.1	19624469

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	plastid	76.22	68.99
GSMUA_Achr9P17980_001	Banana	cytosol	67.13	64.43
GSMUA_Achr8P21220_001	Banana	cytosol	74.83	62.94
GSMUA_Achr11P...	Banana	cytosol, plastid	65.73	59.49
GSMUA_Achr5P29490_001	Banana	plastid	67.13	59.26
GSMUA_Achr10P...	Banana	cytosol, plastid	80.42	58.08
Solyc05g052420.1.1	Tomato	cytosol	32.87	57.32
GSMUA_Achr6P32790_001	Banana	cytosol	80.42	54.5
TraesCS4A01G114400.1	Wheat	cytosol	63.64	50.84
Bra028758.1-P	Field mustard	cytosol	56.64	49.09
KRH00319	Soybean	cytosol	60.14	48.59
KRH49452	Soybean	plastid	57.34	46.07
TraesCS2D01G087500.1	Wheat	plastid	67.83	45.33
TraesCS2B01G105300.1	Wheat	plastid	67.83	44.7
Os03t0297600-01	Rice	cytosol	70.63	44.1
Zm00001d028793_P001	Maize	cytosol, mitochondrion, plastid	67.13	43.64
Zm00001d047705_P001	Maize	plastid	65.73	43.12
HORVU4Hr1G055220.1	Barley	cytosol	67.13	42.86
TraesCS4B01G189800.1	Wheat	cytosol	67.13	42.86
TraesCS4D01G191200.1	Wheat	cytosol	67.13	42.86
EER92405	Sorghum	plastid	65.73	42.34
KRH73249	Soybean	plastid	61.54	42.31
CDY04951	Canola	cytosol	57.34	41.62
VIT_13s0067g01940.t01	Wine grape	plastid	61.54	41.51
Solyc03g095780.1.1	Tomato	plastid	58.04	41.29
KRH76014	Soybean	cytosol	62.24	41.2
CDX98844	Canola	cytosol	58.74	41.18
AT5G05440.1	Thale cress	cytosol	58.04	40.89
PGSC0003DMT400028658	Potato	nucleus	60.84	40.85
Solyc09g015380.1.1	Tomato	plastid	57.34	40.8
Bra009113.1-P	Field mustard	cytosol	58.04	40.69
CDX70150	Canola	cytosol	58.04	40.69
PGSC0003DMT400053102	Potato	cytosol, plastid	56.64	40.3
PGSC0003DMT400053119	Potato	cytosol, plastid	56.64	40.3
PGSC0003DMT400053120	Potato	cytosol, plastid	56.64	40.3
Bra000052.1-P	Field mustard	plastid	58.04	40.1
CDY07739	Canola	plastid	58.04	40.1
Solyc10g085310.1.1	Tomato	plastid	59.44	39.91
CDX80959	Canola	cytosol	56.64	39.9
PGSC0003DMT400075056	Potato	plastid	59.44	39.72
CDY18391	Canola	plastid	56.64	39.71
Bra017125.1-P	Field mustard	plastid	56.64	39.71
CDY54415	Canola	cytosol	56.64	39.71
Bra005853.1-P	Field mustard	cytosol	55.94	39.41
CDY72318	Canola	cytosol	55.94	39.41
VIT_08s0058g00470.t01	Wine grape	plastid	62.24	39.21
CDY14471	Canola	plastid	56.64	39.13
PGSC0003DMT400041080	Potato	mitochondrion	56.64	39.13
AT2G38310.1	Thale cress	plastid	56.64	39.13
KRH14908	Soybean	plastid	59.44	38.99
Solyc10g076410.1.1	Tomato	plastid	55.24	38.92
CDX91449	Canola	plastid	55.94	38.65
CDY54453	Canola	plastid	55.94	38.46
PGSC0003DMT400061535	Potato	plastid	58.04	38.07
GSMUA_Achr4P10630_001	Banana	mitochondrion	41.96	37.27
Bra017012.1-P	Field mustard	cytosol	53.15	37.07
CDY52923	Canola	cytosol	53.15	37.07
CDX93191	Canola	cytosol	52.45	36.95
PGSC0003DMT400069734	Potato	mitochondrion, plastid	53.15	36.54
AT2G40330.1	Thale cress	cytosol	53.15	35.35
CDX74796	Canola	cytosol, nucleus, plastid	51.75	34.91
Bra000184.1-P	Field mustard	cytosol, mitochondrion	51.05	34.43
Bra004967.1-P	Field mustard	mitochondrion	51.05	34.43
CDY07608	Canola	cytosol, mitochondrion	51.05	34.43
GSMUA_Achr7P09320_001	Banana	cytosol	44.76	34.41
CDY24911	Canola	cytosol, mitochondrion	51.05	34.27
CDY18867	Canola	cytosol, mitochondrion, nucleus, plastid	50.35	33.96
TraesCS2A01G089400.1	Wheat	plastid	67.83	33.92
GSMUA_AchrUn_...	Banana	cytosol	43.36	33.33
GSMUA_Achr6P00980_001	Banana	cytosol	45.45	33.33
GSMUA_Achr2P19970_001	Banana	cytosol	42.66	32.8
GSMUA_Achr10P...	Banana	cytosol	42.66	32.8
GSMUA_Achr10P...	Banana	cytosol	44.76	32.49
GSMUA_Achr10P...	Banana	cytosol	41.96	32.26
Bra005115.1-P	Field mustard	plastid	33.57	32.21
GSMUA_Achr4P19170_001	Banana	cytosol	43.36	31.96
KRH31193	Soybean	cytosol, golgi, plastid	57.34	31.91
Solyc06g050500.2.1	Tomato	plastid	59.44	30.91
GSMUA_Achr8P14780_001	Banana	cytosol	44.06	30.58
GSMUA_Achr4P08490_001	Banana	cytosol	41.96	30.15
GSMUA_Achr3P03480_001	Banana	cytosol	41.96	29.13
GSMUA_Achr4P15170_001	Banana	cytosol	50.35	28.8
GSMUA_Achr8P19910_001	Banana	mitochondrion	40.56	27.75
GSMUA_Achr4P15670_001	Banana	cytosol	35.66	27.27
GSMUA_Achr2P15420_001	Banana	cytosol, mitochondrion, nucleus, plastid	41.26	25.88

Protein Annotations

EnsemblPlants:GSMUA_Achr9P04600_001	EnsemblPlants:GSMUA_Achr9T04600_001	EnsemblPlantsGene:GSMUA_Achr9G04600_001	Gene3D:3.30.530.20	InterPro:IPR023393	InterPro:Polyketide_cyclase/dehydratase
InterPro:START-like_dom_sf	PANTHER:PTHR31213	PANTHER:PTHR31213:SF3	PFAM:PF10604	SEG:seg	SUPFAM:SSF55961
UniParc:UPI0002965087	UniProt:M0TXG9	MapMan:11.1.2.1.1.1	:	:	:

Description

cyclase/dehydrase family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G04600_001]

Coordinates

chr9:-:3040917..3041483

Molecular Weight (calculated)

15659.6 Da

IEP (calculated)

6.939

GRAVY (calculated)

-0.129

Length

143 amino acids

Sequence
(BLAST)

001: MPCIPATEFC TAHEVPEAVA RHHEHAVGTN QCCSAVVQTV TAPVAAVWAV RLEILDDERH VLGFRVVGGE HRLANYRSVT TLHPDDDGGG RTVVVESYVV
101: DVPPGNTTEE TRVFVDTIVK CNLRSLARIA GSLQVRRRRA THN

Best Arabidopsis Sequence Match ( AT5G05440.1 )
(BLAST)

001: MRSPVQLQHG SDATNGFHTL QPHDQTDGPI KRVCLTRGMH VPEHVAMHHT HDVGPDQCCS SVVQMIHAPP ESVWALVRRF DNPKVYKNFI RQCRIVQGDG
101: LHVGDLREVM VVSGLPAVSS TERLEILDEE RHVISFSVVG GDHRLKNYRS VTTLHASDDE GTVVVESYIV DVPPGNTEEE TLSFVDTIVR CNLQSLARST
201: NRQ

Arabidopsis Description

PYL5Abscisic acid receptor PYL5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLB1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.