Factsheet for Bra028758.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra002766.1-P
Bra010441.1-P
Bra013945.1-P
Bra016034.1-P
Bra019121.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G05440.1	Bra016034.1-P	AT1G72770.1	19407142
AT5G05440.1	Bra016034.1-P	AT1G72770.1	19624469
AT5G05440.1	Bra010441.1-P	AT4G26080.1	21798944
AT5G05440.1	Bra013945.1-P	AT4G26080.1	21798944
AT5G05440.1	Bra019121.1-P	AT4G26080.1	21798944
AT5G05440.1	Bra002766.1-P	AT5G57050.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04951	Canola	cytosol	100.0	83.76
AT5G05440.1	Thale cress	cytosol	92.73	75.37
Bra009113.1-P	Field mustard	cytosol	92.73	75.0
Bra005853.1-P	Field mustard	cytosol	89.7	72.91
TraesCS4A01G114400.1	Wheat	cytosol	61.82	56.98
GSMUA_Achr9P04600_001	Banana	cytosol	49.09	56.64
TraesCS1B01G306800.1	Wheat	mitochondrion	64.85	55.15
Bra017125.1-P	Field mustard	plastid	66.06	53.43
TraesCS1A01G297600.1	Wheat	mitochondrion	64.85	53.23
TraesCS1D01G293600.1	Wheat	mitochondrion, plastid	64.85	53.23
HORVU1Hr1G070420.1	Barley	mitochondrion	64.24	52.74
Bra000052.1-P	Field mustard	plastid	66.06	52.66
Zm00001d038436_P001	Maize	plastid	63.03	52.0
GSMUA_Achr6P32790_001	Banana	cytosol	66.06	51.66
Bra005115.1-P	Field mustard	plastid	46.06	51.01
HORVU3Hr1G088100.1	Barley	plastid	63.64	50.97
HORVU3Hr1G039010.1	Barley	plastid	63.64	50.97
TraesCS3A01G348400.1	Wheat	plastid	63.03	50.49
TraesCS3D01G342000.1	Wheat	plastid	63.03	50.49
TraesCS3B01G380300.1	Wheat	mitochondrion, plastid	63.03	50.24
Bra025048.1-P	Field mustard	cytosol	51.52	50.0
Bra013334.1-P	Field mustard	cytosol	49.7	49.4
EES19683	Sorghum	plastid	64.24	49.07
TraesCS2D01G087500.1	Wheat	plastid	63.64	49.07
GSMUA_AchrUn_...	Banana	plastid	46.67	48.73
TraesCS2B01G105300.1	Wheat	plastid	63.64	48.39
GSMUA_Achr9P17980_001	Banana	cytosol	43.64	48.32
Os05t0473000-01	Rice	cytosol	63.03	47.93
Bra017012.1-P	Field mustard	cytosol	59.39	47.8
Zm00001d043014_P001	Maize	cytosol	61.21	47.42
Zm00001d047705_P001	Maize	plastid	62.42	47.25
EER92405	Sorghum	plastid	62.42	46.4
Zm00001d028793_P001	Maize	cytosol, mitochondrion, plastid	61.82	46.36
Bra000184.1-P	Field mustard	cytosol, mitochondrion	59.39	46.23
GSMUA_Achr11P...	Banana	cytosol, plastid	44.24	46.2
Bra004967.1-P	Field mustard	mitochondrion	58.79	45.75
Bra007772.1-P	Field mustard	cytosol	52.12	45.74
Bra012635.1-P	Field mustard	cytosol	52.73	45.55
TraesCS4D01G191200.1	Wheat	cytosol	61.82	45.54
TraesCS4B01G189800.1	Wheat	cytosol	61.82	45.54
GSMUA_Achr8P21220_001	Banana	cytosol	46.67	45.29
HORVU4Hr1G055220.1	Barley	cytosol	61.21	45.09
Os03t0297600-01	Rice	cytosol	62.42	44.98
Bra026299.1-P	Field mustard	cytosol	49.7	44.57
Bra029093.1-P	Field mustard	cytosol	49.09	44.02
GSMUA_Achr5P29490_001	Banana	plastid	43.03	43.83
Bra033267.1-P	Field mustard	cytosol	49.09	43.55
Bra013262.1-P	Field mustard	cytosol	50.3	43.46
Bra003077.1-P	Field mustard	cytosol	46.67	41.85
Bra003463.1-P	Field mustard	cytosol	46.67	41.18
Bra022634.1-P	Field mustard	cytosol	46.67	40.96
Bra024995.1-P	Field mustard	nucleus	51.52	40.48
Bra000938.1-P	Field mustard	cytosol	47.27	40.41
Os01t0827800-00	Rice	plastid	62.42	40.23
Bra021032.1-P	Field mustard	cytosol	37.58	39.49
Bra017526.1-P	Field mustard	nucleus	43.03	38.8
Bra008064.1-P	Field mustard	plastid	47.88	38.54
GSMUA_Achr10P...	Banana	cytosol, plastid	46.06	38.38
TraesCS2A01G089400.1	Wheat	plastid	63.64	36.71
OQU87775	Sorghum	endoplasmic reticulum, extracellular	58.79	35.66
Zm00001d012475_P001	Maize	cytosol	61.21	32.37

Protein Annotations

EnsemblPlants:Bra028758.1	EnsemblPlants:Bra028758.1-P	EnsemblPlantsGene:Bra028758	Gene3D:3.30.530.20	InterPro:IPR023393	InterPro:Polyketide_cyclase/dehydratase
InterPro:START-like_dom_sf	PANTHER:PTHR31213	PANTHER:PTHR31213:SF3	PFAM:PF10604	SEG:seg	SUPFAM:SSF55961
UniParc:UPI000254311C	UniProt:M4EIZ3	MapMan:11.1.2.1.1.1	:	:	:

Description

AT5G05440 (E=2e-081) | unknown protein

Coordinates

chrA02:+:2181870..2182367

Molecular Weight (calculated)

18379.8 Da

IEP (calculated)

5.767

GRAVY (calculated)

-0.221

Length

165 amino acids

Sequence
(BLAST)

001: MHVPEHVAMH HTHDLGPGKC CSSVVQTIHA PLESVWALVR RFDNPKLYKN FVKQCRIVQG DGLHAGDLRE VMVVSGLPAV SSTERLEILD EERYVISFSV
101: VGGDHRLENY RSVTTLHASD DEGTVVVESY VVDVPPGNTE EETLSFVDTI VRCNLQSLAR STNRQ

Best Arabidopsis Sequence Match ( AT5G05440.1 )
(BLAST)

001: MRSPVQLQHG SDATNGFHTL QPHDQTDGPI KRVCLTRGMH VPEHVAMHHT HDVGPDQCCS SVVQMIHAPP ESVWALVRRF DNPKVYKNFI RQCRIVQGDG
101: LHVGDLREVM VVSGLPAVSS TERLEILDEE RHVISFSVVG GDHRLKNYRS VTTLHASDDE GTVVVESYIV DVPPGNTEEE TLSFVDTIVR CNLQSLARST
201: NRQ

Arabidopsis Description

PYL5Abscisic acid receptor PYL5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLB1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.