Factsheet for Bra026299.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra016034.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G27920.1	Bra016034.1-P	AT1G72770.1	19407142

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89219	Canola	cytosol	100.0	99.46
AT4G27920.1	Thale cress	cytosol	80.43	80.87
Bra003077.1-P	Field mustard	cytosol	71.74	71.74
Solyc03g007310.2.1	Tomato	cytosol	71.74	71.35
Bra029093.1-P	Field mustard	cytosol	71.2	71.2
VIT_16s0050g02620.t01	Wine grape	cytosol	71.2	70.81
PGSC0003DMT400023511	Potato	cytosol	70.65	70.27
Bra022634.1-P	Field mustard	cytosol	70.65	69.15
KRH65845	Soybean	cytosol	71.2	67.88
KRH18155	Soybean	cytosol	70.11	67.54
GSMUA_Achr10P...	Banana	cytosol	65.22	64.52
GSMUA_Achr2P19970_001	Banana	cytosol	64.67	63.98
KRH53449	Soybean	cytosol	66.3	63.87
Bra003463.1-P	Field mustard	cytosol	64.13	63.1
GSMUA_Achr10P...	Banana	cytosol	63.04	62.37
Bra033267.1-P	Field mustard	cytosol	63.04	62.37
GSMUA_AchrUn_...	Banana	cytosol	61.41	60.75
GSMUA_Achr3P03480_001	Banana	cytosol	66.85	59.71
Bra000938.1-P	Field mustard	cytosol	62.5	59.59
HORVU0Hr1G032390.2	Barley	cytosol, extracellular	27.72	59.3
EES17886	Sorghum	cytosol	61.96	57.87
Os02t0255500-01	Rice	cytosol	64.13	57.84
Zm00001d010445_P001	Maize	cytosol	61.41	57.36
Zm00001d037719_P001	Maize	cytosol	61.41	57.36
GSMUA_Achr8P19910_001	Banana	mitochondrion	64.13	56.46
TraesCS1A01G126800.1	Wheat	cytosol	62.5	56.1
TraesCS1B01G145800.1	Wheat	cytosol	62.5	56.1
TraesCS1D01G126900.1	Wheat	cytosol	62.5	56.1
Zm00001d016105_P001	Maize	cytosol	64.13	55.66
EES04864	Sorghum	cytosol	63.04	54.98
Os05t0213500-01	Rice	cytosol, nucleus	61.96	54.55
KRH65286	Soybean	cytosol	26.63	53.85
Zm00001d002533_P001	Maize	cytosol	36.41	53.17
Zm00001d053396_P001	Maize	cytosol	61.96	52.53
Os02t0255300-00	Rice	cytosol, plastid	50.54	51.67
GSMUA_Achr2P15420_001	Banana	cytosol, mitochondrion, nucleus, plastid	63.59	51.32
KRH16733	Soybean	cytosol	28.8	50.48
Bra028758.1-P	Field mustard	cytosol	44.57	49.7
Os06t0528300-00	Rice	cytosol	53.8	48.06
Os06t0527800-01	Rice	cytosol	53.26	47.57
Os06t0526400-00	Rice	cytosol	50.54	47.45
TraesCS7B01G232100.1	Wheat	cytoskeleton, cytosol, nucleus	49.46	46.67
HORVU7Hr1G079270.1	Barley	cytosol	48.37	45.18
TraesCS7D01G328000.1	Wheat	cytosol	48.37	45.18
Bra025048.1-P	Field mustard	cytosol	40.22	43.53
TraesCS7A01G350800.1	Wheat	cytosol	46.2	43.15
Bra000052.1-P	Field mustard	plastid	46.74	41.55
Bra017125.1-P	Field mustard	plastid	45.65	41.18
Bra009113.1-P	Field mustard	cytosol	45.65	41.18
Bra007772.1-P	Field mustard	cytosol	41.3	40.43
Bra005853.1-P	Field mustard	cytosol	44.57	40.39
Bra013334.1-P	Field mustard	cytosol	36.41	40.36
HORVU1Hr1G030390.2	Barley	extracellular, mitochondrion, plasma membrane	62.5	39.52
Bra012635.1-P	Field mustard	cytosol	40.76	39.27
Bra017012.1-P	Field mustard	cytosol	43.48	39.02
Bra005115.1-P	Field mustard	plastid	31.52	38.93
Bra013262.1-P	Field mustard	cytosol	40.22	38.74
HORVU3Hr1G054230.1	Barley	mitochondrion	33.15	38.36
Bra004967.1-P	Field mustard	mitochondrion	42.93	37.26
Bra000184.1-P	Field mustard	cytosol, mitochondrion	42.93	37.26
Bra021032.1-P	Field mustard	cytosol	30.98	36.31
Bra024995.1-P	Field mustard	nucleus	41.3	36.19
Bra017526.1-P	Field mustard	nucleus	33.7	33.88
Bra008064.1-P	Field mustard	plastid	36.41	32.68
Os06t0526466-00	Rice	cytosol, mitochondrion	21.2	28.26

Protein Annotations

MapMan:11.1.2.1.1.1	Gene3D:3.30.530.20	EnsemblPlantsGene:Bra026299	EnsemblPlants:Bra026299.1	EnsemblPlants:Bra026299.1-P	GO:GO:0003674
GO:GO:0004864	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538
GO:GO:0030234	GO:GO:0032515	GO:GO:0043086	GO:GO:0080163	InterPro:IPR023393	UniProt:M4EBZ0
PFAM:PF10604	PANTHER:PTHR31213	PANTHER:PTHR31213:SF12	InterPro:Polyketide_cyclase/dehydratase	SUPFAM:SSF55961	InterPro:START-like_dom_sf
UniParc:UPI0002543F23	:	:	:	:	:

Description

AT4G27920 (E=7e-083) | unknown protein

Coordinates

chrA01:+:10145137..10145909

Molecular Weight (calculated)

20653.8 Da

IEP (calculated)

5.835

GRAVY (calculated)

-0.162

Length

184 amino acids

Sequence
(BLAST)

001: MNADETKNVE SDYIKMHHMH GELLESQCSS TLVKHIKAPL HLVWSLVRRF DQPQKYKPFI SGCVVKDKKL EIGSVREVDV RSGLPATKST EILEFLDDNQ
101: HVLSIRIVGG DHRLKNYSSV ISLHPETIEA KAGTLVIESF VVDVPEGNTK EETCFFVEAL IQCNLKSLAY VSESLEAESI AQMV

Best Arabidopsis Sequence Match ( AT4G27920.1 )
(BLAST)

001: MNGDETKKVE SEYIKKHHRH ELVESQCSST LVKHIKAPLH LVWSIVRRFD EPQKYKPFIS RCVVQGKKLE VGSVREVDLK SGLPATKSTE VLEILDDNEH
101: ILGIRIVGGD HRLKNYSSTI SLHSETIDGK TGTLAIESFV VDVPEGNTKE ETCFFVEALI QCNLNSLADV TERLQAESME KKI

Arabidopsis Description

PYL10RCAR4 [Source:UniProtKB/TrEMBL;Acc:A0A178V0C5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.