Factsheet for Bra033267.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra002766.1-P
Bra010441.1-P
Bra013945.1-P
Bra016034.1-P
Bra019121.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G01360.1	Bra016034.1-P	AT1G72770.1	19407142
AT1G01360.1	Bra016034.1-P	AT1G72770.1	19407143
AT1G01360.1	Bra010441.1-P	AT4G26080.1	19407143
AT1G01360.1	Bra013945.1-P	AT4G26080.1	19407143
AT1G01360.1	Bra019121.1-P	AT4G26080.1	19407143
AT1G01360.1	Bra002766.1-P	AT5G57050.1	19407143

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90028	Canola	cytosol	100.0	98.94
AT1G01360.1	Thale cress	cytosol	90.86	90.37
Bra000938.1-P	Field mustard	cytosol	80.65	77.72
VIT_02s0025g01340.t01	Wine grape	cytosol	75.27	75.68
PGSC0003DMT400012888	Potato	cytosol	69.35	72.88
GSMUA_Achr10P...	Banana	cytosol	72.04	72.04
Solyc08g082180.2.1	Tomato	cytosol	73.12	71.96
PGSC0003DMT400031686	Potato	cytosol	73.12	71.96
Solyc12g055990.1.1	Tomato	cytosol	69.89	71.82
Bra003077.1-P	Field mustard	cytosol	69.89	70.65
GSMUA_AchrUn_...	Banana	cytosol	68.82	68.82
HORVU0Hr1G032390.2	Barley	cytosol, extracellular	31.72	68.6
Bra022634.1-P	Field mustard	cytosol	68.82	68.09
Bra003463.1-P	Field mustard	cytosol	68.28	67.91
GSMUA_Achr10P...	Banana	cytosol	67.74	67.74
GSMUA_Achr2P19970_001	Banana	cytosol	67.74	67.74
Bra029093.1-P	Field mustard	cytosol	66.13	66.85
TraesCS1D01G126900.1	Wheat	cytosol	70.97	64.39
TraesCS1A01G126800.1	Wheat	cytosol	70.97	64.39
Os02t0255500-01	Rice	cytosol	70.43	64.22
Os05t0213500-01	Rice	cytosol, nucleus	72.04	64.11
Zm00001d037719_P001	Maize	cytosol	67.74	63.96
TraesCS1B01G145800.1	Wheat	cytosol	70.43	63.9
EES17886	Sorghum	cytosol	67.2	63.45
Zm00001d010445_P001	Maize	cytosol	67.2	63.45
Bra026299.1-P	Field mustard	cytosol	62.37	63.04
GSMUA_Achr3P03480_001	Banana	cytosol	69.35	62.62
EES04864	Sorghum	cytosol	70.97	62.56
Zm00001d016105_P001	Maize	cytosol	70.97	62.26
Zm00001d053396_P001	Maize	cytosol	69.35	59.45
GSMUA_Achr8P19910_001	Banana	mitochondrion	65.59	58.37
Zm00001d002533_P001	Maize	cytosol	39.25	57.94
GSMUA_Achr2P15420_001	Banana	cytosol, mitochondrion, nucleus, plastid	70.43	57.46
Os02t0255300-00	Rice	cytosol, plastid	53.76	55.56
TraesCS7B01G232100.1	Wheat	cytoskeleton, cytosol, nucleus	57.53	54.87
HORVU7Hr1G079270.1	Barley	cytosol	57.53	54.31
TraesCS7D01G328000.1	Wheat	cytosol	56.99	53.81
TraesCS7A01G350800.1	Wheat	cytosol	55.38	52.28
Os06t0527800-01	Rice	cytosol	56.99	51.46
Os06t0528300-00	Rice	cytosol	56.99	51.46
Bra028758.1-P	Field mustard	cytosol	43.55	49.09
Os06t0526400-00	Rice	cytosol	51.08	48.47
HORVU1Hr1G030390.2	Barley	extracellular, mitochondrion, plasma membrane	70.97	45.36
Bra025048.1-P	Field mustard	cytosol	41.4	45.29
Bra017125.1-P	Field mustard	plastid	47.31	43.14
Bra000052.1-P	Field mustard	plastid	47.31	42.51
HORVU3Hr1G054230.1	Barley	mitochondrion	36.02	42.14
Bra012635.1-P	Field mustard	cytosol	43.01	41.88
Bra013334.1-P	Field mustard	cytosol	37.1	41.57
Bra005115.1-P	Field mustard	plastid	32.8	40.94
Bra009113.1-P	Field mustard	cytosol	44.62	40.69
Bra017012.1-P	Field mustard	cytosol	44.62	40.49
Bra005853.1-P	Field mustard	cytosol	43.55	39.9
Bra013262.1-P	Field mustard	cytosol	40.86	39.79
Bra007772.1-P	Field mustard	cytosol	39.78	39.36
Bra000184.1-P	Field mustard	cytosol, mitochondrion	44.09	38.68
Bra004967.1-P	Field mustard	mitochondrion	43.01	37.74
Bra024995.1-P	Field mustard	nucleus	41.94	37.14
Bra021032.1-P	Field mustard	cytosol	30.65	36.31
Bra017526.1-P	Field mustard	nucleus	34.95	35.52
Bra008064.1-P	Field mustard	plastid	35.48	32.2
Os06t0526466-00	Rice	cytosol, mitochondrion	20.97	28.26

Protein Annotations

MapMan:11.1.2.1.1.1	Gene3D:3.30.530.20	EnsemblPlantsGene:Bra033267	EnsemblPlants:Bra033267.1	EnsemblPlants:Bra033267.1-P	GO:GO:0003674
GO:GO:0004864	GO:GO:0004871	GO:GO:0004872	GO:GO:0005488	GO:GO:0006464	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0008289	GO:GO:0009719	GO:GO:0009738
GO:GO:0009987	GO:GO:0010427	GO:GO:0019538	GO:GO:0030234	GO:GO:0032515	GO:GO:0038023
GO:GO:0043086	InterPro:IPR023393	UniProt:M4EWT2	PFAM:PF10604	PANTHER:PTHR31213	PANTHER:PTHR31213:SF4
InterPro:Polyketide_cyclase/dehydratase	SUPFAM:SSF55961	InterPro:START-like_dom_sf	UniParc:UPI0002545155	:	:

Description

AT1G01360 (E=6e-095) | unknown protein

Coordinates

chrA10:+:4592779..4593604

Molecular Weight (calculated)

20970.2 Da

IEP (calculated)

6.506

GRAVY (calculated)

-0.290

Length

186 amino acids

Sequence
(BLAST)

001: MDGGTEMYGG LETMQYVRRH HQHNCREDQC TSALVKHIKA PLRLVWSVVR RFDEPQKYKP FVSRCTVIGD PEIGSLREVN VKSGLPATTS TERLELLDDD
101: EHILGIKIIG GDHRLKNYSS IVTVHPEIIE GRPGTMVIES FVVDVPQGNT KDETCYFVEA LIRCNLKSLA HVSERLASQD IINLSI

Best Arabidopsis Sequence Match ( AT1G01360.1 )
(BLAST)

001: MMDGVEGGTA MYGGLETVQY VRTHHQHLCR ENQCTSALVK HIKAPLHLVW SLVRRFDQPQ KYKPFVSRCT VIGDPEIGSL REVNVKSGLP ATTSTERLEL
101: LDDEEHILGI KIIGGDHRLK NYSSILTVHP EIIEGRAGTM VIESFVVDVP QGNTKDETCY FVEALIRCNL KSLADVSERL ASQDITQ

Arabidopsis Description

PYL9RCAR1 [Source:UniProtKB/TrEMBL;Acc:A0A178W4H4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.