Factsheet for Os06t0526400-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0583100-01
Os05t0537400-00
Os05t0592800-02

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G01360.1	Os01t0583100-01	AT1G72770.1	19407142
AT1G01360.1	Os05t0537400-00	AT1G72770.1	19407142
AT1G01360.1	Os05t0592800-02	AT1G72770.1	19407142
AT1G01360.1	Os01t0583100-01	AT1G72770.1	19407143
AT1G01360.1	Os05t0537400-00	AT1G72770.1	19407143
AT1G01360.1	Os05t0592800-02	AT1G72770.1	19407143
AT4G01026.1	Os01t0583100-01	AT1G72770.1	19407142
AT4G01026.1	Os05t0537400-00	AT1G72770.1	19407142
AT4G01026.1	Os05t0592800-02	AT1G72770.1	19407142
AT4G27920.1	Os01t0583100-01	AT1G72770.1	19407142
AT4G27920.1	Os05t0537400-00	AT1G72770.1	19407142
AT4G27920.1	Os05t0592800-02	AT1G72770.1	19407142

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0527800-01	Rice	cytosol	75.51	71.84
Os06t0528300-00	Rice	cytosol	74.49	70.87
Os02t0255500-01	Rice	cytosol	63.27	60.78
TraesCS7D01G328000.1	Wheat	cytosol	60.2	59.9
TraesCS7B01G232100.1	Wheat	cytoskeleton, cytosol, nucleus	59.18	59.49
HORVU7Hr1G079270.1	Barley	cytosol	59.69	59.39
KRH18155	Soybean	cytosol	56.63	58.12
KRH65845	Soybean	cytosol	56.63	57.51
TraesCS7A01G350800.1	Wheat	cytosol	57.65	57.36
PGSC0003DMT400012888	Potato	cytosol	51.53	57.06
Solyc12g055990.1.1	Tomato	cytosol	52.55	56.91
VIT_16s0050g02620.t01	Wine grape	cytosol	52.55	55.68
GSMUA_Achr10P...	Banana	cytosol	52.55	55.38
PGSC0003DMT400023511	Potato	cytosol	51.53	54.59
KRH47929	Soybean	cytosol	51.53	54.59
VIT_02s0025g01340.t01	Wine grape	cytosol	51.02	54.05
Solyc03g007310.2.1	Tomato	cytosol	51.02	54.05
KRH53449	Soybean	cytosol	52.55	53.93
Solyc08g082180.2.1	Tomato	cytosol	51.53	53.44
Bra003077.1-P	Field mustard	cytosol	50.0	53.26
CDY49462	Canola	cytosol	50.0	53.26
GSMUA_Achr10P...	Banana	cytosol	50.51	53.23
CDY25052	Canola	cytosol	50.51	52.94
PGSC0003DMT400031686	Potato	cytosol	51.02	52.91
GSMUA_Achr4P08490_001	Banana	cytosol	53.57	52.76
CDY61488	Canola	cytosol	49.49	52.72
CDY64350	Canola	cytosol	48.98	52.46
CDY53905	Canola	cytosol	50.0	52.41
Bra003463.1-P	Field mustard	cytosol	50.0	52.41
CDY38728	Canola	cytosol	48.98	52.17
Bra029093.1-P	Field mustard	cytosol	48.98	52.17
GSMUA_Achr2P19970_001	Banana	cytosol	49.49	52.15
AT5G53160.2	Thale cress	cytosol, nucleus, peroxisome	50.0	52.13
AT1G01360.1	Thale cress	cytosol	49.49	51.87
Bra022634.1-P	Field mustard	cytosol	49.49	51.6
CDX96197	Canola	cytosol	49.49	51.6
Os06t0526466-00	Rice	cytosol, mitochondrion	36.22	51.45
KRH16733	Soybean	cytosol	27.55	51.43
AT4G27920.1	Thale cress	cytosol	47.96	51.37
Bra033267.1-P	Field mustard	cytosol	48.47	51.08
CDY27022	Canola	cytosol	48.98	51.06
CDY15183	Canola	cytosol	48.47	50.8
KRH65286	Soybean	cytosol	23.47	50.55
Bra026299.1-P	Field mustard	cytosol	47.45	50.54
CDX90028	Canola	cytosol	48.47	50.53
CDY70517	Canola	cytosol	47.45	50.27
CDX89219	Canola	cytosol	47.45	50.27
PGSC0003DMT400000606	Potato	cytosol	47.45	50.0
Solyc01g095700.2.1	Tomato	cytosol	47.45	50.0
GSMUA_AchrUn_...	Banana	cytosol	47.45	50.0
CDY04688	Canola	cytosol	47.45	50.0
Os05t0213500-01	Rice	cytosol, nucleus	52.55	49.28
VIT_15s0046g01050.t01	Wine grape	cytosol	47.45	48.44
CDY07165	Canola	cytosol	14.8	48.33
CDX74368	Canola	cytosol	47.45	48.19
Bra000938.1-P	Field mustard	cytosol	46.94	47.67
CDX91871	Canola	cytosol	46.94	47.67
GSMUA_Achr3P03480_001	Banana	cytosol	49.49	47.09
GSMUA_Achr8P19910_001	Banana	mitochondrion	49.49	46.41
KRH06494	Soybean	cytosol, extracellular, vacuole	43.88	45.03
Os02t0255300-00	Rice	cytosol, plastid	41.33	45.0
GSMUA_Achr4P15670_001	Banana	cytosol	42.35	44.38
GSMUA_Achr2P15420_001	Banana	cytosol, mitochondrion, nucleus, plastid	50.0	42.98
AT4G01026.1	Thale cress	cytosol	44.9	41.71
Os05t0473000-01	Rice	cytosol	37.24	33.64
Os06t0562200-01	Rice	cytosol	35.2	33.33
Os10t0573400-01	Rice	plasma membrane	35.2	32.55
Os02t0226801-00	Rice	cytosol	34.18	31.9
Os03t0297600-01	Rice	cytosol	37.24	31.88
Os01t0827800-00	Rice	plastid	37.76	28.91

Protein Annotations

EnsemblPlants:Os06t0526400-00	EnsemblPlantsGene:Os06g0526400	Gene3D:3.30.530.20	InterPro:IPR023393	InterPro:Polyketide_cyclase/dehydratase	InterPro:START-like_dom_sf
PANTHER:PTHR31213	PANTHER:PTHR31213:SF16	PFAM:PF10604	ProteinID:BAS98038.1	SEG:seg	SUPFAM:SSF55961
UniParc:UPI0003938CEB	UniProt:A0A0P0WXG6	MapMan:11.1.2.1.1.1	:	:	:

Description

pyrabactin resistance-like 12Similar to AT-rich element binding factor 3. (Os06t0526400-00)

Coordinates

chr6:-:19503056..19506416

Molecular Weight (calculated)

22259.7 Da

IEP (calculated)

6.510

GRAVY (calculated)

-0.317

Length

196 amino acids

Sequence
(BLAST)

001: MNSGAGGAGG AAVGRMPAGS LQWAQWRLAD ERCELREEEM EYMRRFHRHE IGSNQCNSFI AKHVRAPLQN VWSLVRRFDQ PQIYKPFVRK CVMRGNVETG
101: SVREIIVQSG LPATRSIERL EFLDDNEYIL RVKFIGGDHM LKVIDGQPGT VVIESFVVDI PEENTKEDIC YFVKNLLRCN LRTLADVSEE SLASPC

Best Arabidopsis Sequence Match ( AT5G53160.2 )
(BLAST)

001: MEANGIENLT NPNQEREFIR RHHKHELVDN QCSSTLVKHI NAPVHIVWSL VRRFDQPQKY KPFISRCVVK GNMEIGTVRE VDVKSGLPAT RSTERLELLD
101: DNEHILSIRI VGGDHRLKNY SSIISLHPET IEGRIGTLVI ESFVVDVPEG NTKDETCYFV EALIKCNLKS LADISERLAV QDTTESRV

Arabidopsis Description

PYL8RCAR3 [Source:UniProtKB/TrEMBL;Acc:A0A178UJN3]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.