Factsheet for GSMUA_Achr4P15670_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G032390.2	Barley	cytosol, extracellular	34.76	75.58
GSMUA_Achr4P08490_001	Banana	cytosol	71.12	66.83
GSMUA_Achr10P...	Banana	cytosol	63.64	63.98
GSMUA_Achr2P19970_001	Banana	cytosol	63.64	63.98
GSMUA_Achr10P...	Banana	cytosol	63.1	63.44
GSMUA_AchrUn_...	Banana	cytosol	63.1	63.44
GSMUA_Achr3P03480_001	Banana	cytosol	66.84	60.68
TraesCS1D01G126900.1	Wheat	cytosol	66.31	60.49
TraesCS1B01G145800.1	Wheat	cytosol	66.31	60.49
TraesCS1A01G126800.1	Wheat	cytosol	66.31	60.49
Os05t0213500-01	Rice	cytosol, nucleus	65.24	58.37
EES17886	Sorghum	cytosol	60.43	57.36
Os02t0255500-01	Rice	cytosol	62.57	57.35
GSMUA_Achr8P19910_001	Banana	mitochondrion	63.64	56.94
Zm00001d037719_P001	Maize	cytosol	59.89	56.85
Zm00001d010445_P001	Maize	cytosol	59.36	56.35
EES04864	Sorghum	cytosol	63.1	55.92
Zm00001d016105_P001	Maize	cytosol	63.1	55.66
GSMUA_Achr2P15420_001	Banana	cytosol, mitochondrion, nucleus, plastid	64.17	52.63
Os02t0255300-00	Rice	cytosol, plastid	50.27	52.22
Zm00001d053396_P001	Maize	cytosol	60.43	52.07
Os06t0527800-01	Rice	cytosol	49.73	45.15
TraesCS7B01G232100.1	Wheat	cytoskeleton, cytosol, nucleus	46.52	44.62
GSMUA_Achr4P10630_001	Banana	mitochondrion	37.97	44.1
Os06t0528300-00	Rice	cytosol	48.13	43.69
Zm00001d002533_P001	Maize	cytosol	29.41	43.65
HORVU3Hr1G054230.1	Barley	mitochondrion	36.9	43.4
HORVU7Hr1G079270.1	Barley	cytosol	45.45	43.15
TraesCS7D01G328000.1	Wheat	cytosol	45.45	43.15
HORVU1Hr1G030390.2	Barley	extracellular, mitochondrion, plasma membrane	66.31	42.61
Os06t0526400-00	Rice	cytosol	44.38	42.35
TraesCS7A01G350800.1	Wheat	cytosol	44.38	42.13
GSMUA_Achr7P09320_001	Banana	cytosol	39.04	39.25
GSMUA_Achr6P32790_001	Banana	cytosol	43.32	38.39
GSMUA_Achr6P00980_001	Banana	cytosol	39.57	37.95
GSMUA_Achr4P19170_001	Banana	cytosol	38.5	37.11
GSMUA_Achr8P14780_001	Banana	cytosol	40.11	36.41
GSMUA_Achr9P04600_001	Banana	cytosol	27.27	35.66
GSMUA_Achr10P...	Banana	cytosol	37.43	35.53
GSMUA_AchrUn_...	Banana	plastid	29.41	34.81
GSMUA_Achr9P17980_001	Banana	cytosol	26.2	32.89
GSMUA_Achr11P...	Banana	cytosol, plastid	27.27	32.28
GSMUA_Achr4P15170_001	Banana	cytosol	42.78	32.0
GSMUA_Achr5P29490_001	Banana	plastid	26.2	30.25
GSMUA_Achr8P21220_001	Banana	cytosol	27.27	30.0
Os06t0526466-00	Rice	cytosol, mitochondrion	21.39	28.99
GSMUA_Achr10P...	Banana	cytosol, plastid	30.48	28.79

Protein Annotations

EnsemblPlants:GSMUA_Achr4P15670_001	EnsemblPlants:GSMUA_Achr4T15670_001	EnsemblPlantsGene:GSMUA_Achr4G15670_001	Gene3D:3.30.530.20	InterPro:IPR023393	InterPro:Polyketide_cyclase/dehydratase
InterPro:START-like_dom_sf	PANTHER:PTHR31213	PANTHER:PTHR31213:SF4	PFAM:PF10604	SUPFAM:SSF55961	UniParc:UPI000294D7D4
UniProt:M0SP82	MapMan:11.1.2.1.1.1	:	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G15670_001]

Coordinates

chr4:-:11981880..11983119

Molecular Weight (calculated)

20664.7 Da

IEP (calculated)

6.785

GRAVY (calculated)

-0.397

Length

187 amino acids

Sequence
(BLAST)

001: MVVRPDERRM LADGGGVREE APQAGGQGRP VQLHSRQAHQ GPCPSLWSLV RRFDQPHKYK PFISRCVVQG DLAIGSVREV NVKSGLPATT STERLEVLDD
101: QEHVLSVKIV GGDHRLRNYS SIITAHPEVM DGRPGTLVIE SFVVDVPDGN TKDETCYFVE ALIKCNLKSL ADVSERLAVQ NAQPMER

Best Arabidopsis Sequence Match ( AT1G01360.1 )
(BLAST)

001: MMDGVEGGTA MYGGLETVQY VRTHHQHLCR ENQCTSALVK HIKAPLHLVW SLVRRFDQPQ KYKPFVSRCT VIGDPEIGSL REVNVKSGLP ATTSTERLEL
101: LDDEEHILGI KIIGGDHRLK NYSSILTVHP EIIEGRAGTM VIESFVVDVP QGNTKDETCY FVEALIRCNL KSLADVSERL ASQDITQ

Arabidopsis Description

PYL9RCAR1 [Source:UniProtKB/TrEMBL;Acc:A0A178W4H4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.