Factsheet for GSMUA_Achr10P27940_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...
GSMUA_Achr3P26270_001
GSMUA_Achr5P29000_001
GSMUA_Achr6P15180_001
GSMUA_Achr7P24000_001
GSMUA_Achr8P05700_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G73000.1	GSMUA_Achr3P26270_001	AT1G72770.1	19407142
AT1G73000.1	GSMUA_Achr7P24000_001	AT1G72770.1	19407142
AT1G73000.1	GSMUA_Achr8P05700_001	AT1G72770.1	19407142
AT1G73000.1	GSMUA_Achr11P...	AT3G11410.1	19407142
AT1G73000.1	GSMUA_Achr5P29000_001	AT3G11410.1	19407142
AT1G73000.1	GSMUA_Achr6P15180_001	AT3G11410.1	19407142
AT1G73000.1	GSMUA_AchrUn_...	AT3G11410.1	19407142
AT2G26040.1	GSMUA_Achr3P26270_001	AT1G72770.1	19407142
AT2G26040.1	GSMUA_Achr7P24000_001	AT1G72770.1	19407142
AT2G26040.1	GSMUA_Achr8P05700_001	AT1G72770.1	19407142
AT2G26040.1	GSMUA_Achr11P...	AT3G11410.1	19407142
AT2G26040.1	GSMUA_Achr5P29000_001	AT3G11410.1	19407142
AT2G26040.1	GSMUA_Achr6P15180_001	AT3G11410.1	19407142
AT2G26040.1	GSMUA_AchrUn_...	AT3G11410.1	19407142

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P09320_001	Banana	cytosol	84.26	89.25
GSMUA_Achr6P00980_001	Banana	cytosol	83.76	84.62
Solyc08g065410.1.1	Tomato	cytosol	54.82	73.97
Zm00001d016294_P001	Maize	cytosol	69.54	72.87
PGSC0003DMT400075340	Potato	cytosol	68.02	70.53
Solyc12g095970.1.1	Tomato	cytosol	67.01	69.47
VIT_04s0008g00890.t01	Wine grape	cytosol	64.97	69.19
PGSC0003DMT400077008	Potato	cytosol	64.97	68.09
TraesCS7D01G364600.1	Wheat	cytosol	68.02	68.02
HORVU7Hr1G088140.2	Barley	cytosol	67.51	67.86
EES06532	Sorghum	cytosol	70.05	67.65
KRH05492	Soybean	cytosol	64.47	67.55
TraesCS7A01G358200.1	Wheat	cytosol	67.01	67.35
TraesCS7B01G269600.1	Wheat	cytosol	66.5	66.5
AT2G26040.1	Thale cress	cytosol	63.96	66.32
TraesCS3D01G161500.1	Wheat	cytosol, nucleus, plastid	67.51	66.17
TraesCS3A01G154400.1	Wheat	cytosol	65.99	65.99
CDY11503	Canola	cytosol	62.94	65.96
Bra007772.1-P	Field mustard	cytosol	62.94	65.96
KRH52194	Soybean	cytosol	61.93	65.24
KRH61500	Soybean	cytosol	62.44	65.08
CDX76731	Canola	cytosol	61.93	64.89
Os02t0226801-00	Rice	cytosol	66.5	62.38
Os06t0562200-01	Rice	cytosol	64.97	61.84
EER88529	Sorghum	cytosol	63.45	61.27
KRH15519	Soybean	cytosol	64.97	60.95
HORVU3Hr1G030210.5	Barley	plastid	35.03	59.48
HORVU4Hr1G060110.1	Barley	mitochondrion	29.44	59.18
HORVU4Hr1G060100.1	Barley	mitochondrion	28.43	57.14
CDX82120	Canola	plastid	58.38	56.1
CDY48030	Canola	plastid	57.87	55.61
CDY22516	Canola	plastid	57.36	55.12
HORVU3Hr1G040680.1	Barley	plastid	31.98	54.78
Bra008064.1-P	Field mustard	plastid	56.85	54.63
AT1G73000.1	Thale cress	cytosol, plastid	56.35	53.11
GSMUA_Achr4P10630_001	Banana	mitochondrion	41.62	50.93
GSMUA_Achr8P14780_001	Banana	cytosol	52.28	50.0
GSMUA_Achr4P19170_001	Banana	cytosol	48.73	49.48
GSMUA_Achr9P04600_001	Banana	cytosol	32.49	44.76
GSMUA_Achr6P32790_001	Banana	cytosol	47.21	44.08
GSMUA_Achr10P...	Banana	cytosol	40.1	42.47
GSMUA_Achr10P...	Banana	cytosol	40.1	42.47
GSMUA_AchrUn_...	Banana	cytosol	39.09	41.4
GSMUA_Achr2P19970_001	Banana	cytosol	38.07	40.32
GSMUA_AchrUn_...	Banana	plastid	31.98	39.87
GSMUA_Achr9P17980_001	Banana	cytosol	29.95	39.6
GSMUA_Achr5P29490_001	Banana	plastid	32.49	39.51
GSMUA_Achr4P08490_001	Banana	cytosol	39.59	39.2
GSMUA_Achr8P21220_001	Banana	cytosol	33.5	38.82
GSMUA_Achr11P...	Banana	cytosol, plastid	30.96	38.61
GSMUA_Achr8P19910_001	Banana	mitochondrion	40.1	37.8
GSMUA_Achr4P15670_001	Banana	cytosol	35.53	37.43
GSMUA_Achr4P15170_001	Banana	cytosol	45.69	36.0
GSMUA_Achr3P03480_001	Banana	cytosol	37.56	35.92
GSMUA_Achr2P15420_001	Banana	cytosol, mitochondrion, nucleus, plastid	40.61	35.09
GSMUA_Achr10P...	Banana	cytosol, plastid	30.96	30.81
HORVU3Hr1G107030.1	Barley	mitochondrion	36.04	24.57

Protein Annotations

EnsemblPlants:GSMUA_Achr10P27940_001	EnsemblPlants:GSMUA_Achr10T27940_001	EnsemblPlantsGene:GSMUA_Achr10G27940_001	Gene3D:3.30.530.20	InterPro:IPR023393	InterPro:Polyketide_cyclase/dehydratase
InterPro:START-like_dom_sf	PANTHER:PTHR31213	PANTHER:PTHR31213:SF7	PFAM:PF10604	SEG:seg	SUPFAM:SSF55961
UniParc:UPI000294819C	UniProt:M0RM18	MapMan:11.1.2.1.1.1	:	:	:

Description

Abscisic acid receptor PYL2 [Source:GMGC_GENE;Acc:GSMUA_Achr10G27940_001]

Coordinates

chr10:+:30893577..30895059

Molecular Weight (calculated)

21740.8 Da

IEP (calculated)

6.170

GRAVY (calculated)

-0.326

Length

197 amino acids

Sequence
(BLAST)

001: MEPHHHASCS QGLTQEEMAA LEPVIRTHHT FPGAPGTCTS LITQRIDAPL QAVWPVVRRF DKPQRYKHFI KSCSLVHGDG GVGSVREVTV VSGIPASTSV
101: ERLEILDDDR HILSFSVMGG EHRLKNYRSV TSVTEFHTEG KAYTVVLESY VVDIPEGNTE EDTKMFTDIV VKLNLQKLAT VAMASSPGEG RGEREET

Best Arabidopsis Sequence Match ( AT2G26040.1 )
(BLAST)

001: MSSSPAVKGL TDEEQKTLEP VIKTYHQFEP DPTTCTSLIT QRIHAPASVV WPLIRRFDNP ERYKHFVKRC RLISGDGDVG SVREVTVISG LPASTSTERL
101: EFVDDDHRVL SFRVVGGEHR LKNYKSVTSV NEFLNQDSGK VYTVVLESYT VDIPEGNTEE DTKMFVDTVV KLNLQKLGVA ATSAPMHDDE

Arabidopsis Description

PYL2Abscisic acid receptor PYL2 [Source:UniProtKB/Swiss-Prot;Acc:O80992]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.