Factsheet for GSMUA_Achr4P10630_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 5
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...
GSMUA_Achr3P26270_001
GSMUA_Achr5P29000_001
GSMUA_Achr6P15180_001
GSMUA_Achr7P24000_001
GSMUA_Achr8P05700_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G45860.1	GSMUA_Achr3P26270_001	AT1G72770.1	19407142
AT5G45860.1	GSMUA_Achr7P24000_001	AT1G72770.1	19407142
AT5G45860.1	GSMUA_Achr8P05700_001	AT1G72770.1	19407142
AT5G45870.1	GSMUA_Achr3P26270_001	AT1G72770.1	19407142
AT5G45870.1	GSMUA_Achr7P24000_001	AT1G72770.1	19407142
AT5G45870.1	GSMUA_Achr8P05700_001	AT1G72770.1	19407142
AT5G45870.1	GSMUA_Achr11P...	AT3G11410.1	19407142
AT5G45870.1	GSMUA_Achr5P29000_001	AT3G11410.1	19407142
AT5G45870.1	GSMUA_Achr6P15180_001	AT3G11410.1	19407142
AT5G45870.1	GSMUA_AchrUn_...	AT3G11410.1	19407142

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT5G45870.1	Thale cress	cytosol	53.42	54.09
AT5G45860.1	Thale cress	cytosol	52.17	52.17
CDY58053	Canola	cytosol	50.93	50.62
CDY68675	Canola	cytosol	50.93	50.62
GSMUA_Achr4P15170_001	Banana	cytosol	78.26	50.4
CDX78879	Canola	cytosol	50.31	48.8
CDX99450	Canola	cytosol	50.31	48.8
CDY58019	Canola	cytosol	50.31	48.8
AT4G18620.1	Thale cress	cytosol	49.69	48.78
Bra025048.1-P	Field mustard	cytosol	50.31	47.65
Bra013334.1-P	Field mustard	cytosol	49.07	47.59
KRH21267	Soybean	cytosol	53.42	46.49
KRH11022	Soybean	cytosol	52.8	45.95
GSMUA_Achr6P32790_001	Banana	cytosol	57.14	43.6
GSMUA_Achr7P09320_001	Banana	cytosol	50.31	43.55
GSMUA_AchrUn_...	Banana	plastid	42.24	43.04
GSMUA_Achr10P...	Banana	cytosol	49.69	43.01
GSMUA_Achr6P00980_001	Banana	cytosol	51.55	42.56
GSMUA_Achr9P04600_001	Banana	cytosol	37.27	41.96
GSMUA_AchrUn_...	Banana	cytosol	48.45	41.94
GSMUA_Achr10P...	Banana	cytosol	48.45	41.94
GSMUA_Achr10P...	Banana	cytosol	50.93	41.62
GSMUA_Achr9P17980_001	Banana	cytosol	38.51	41.61
GSMUA_Achr2P19970_001	Banana	cytosol	47.83	41.4
GSMUA_Achr5P29490_001	Banana	plastid	41.61	41.36
GSMUA_Achr4P08490_001	Banana	cytosol	50.93	41.21
GSMUA_Achr11P...	Banana	cytosol, plastid	40.37	41.14
PGSC0003DMT400026521	Potato	cytosol	47.83	40.31
GSMUA_Achr4P19170_001	Banana	cytosol	46.58	38.66
GSMUA_Achr4P15670_001	Banana	cytosol	44.1	37.97
GSMUA_Achr3P03480_001	Banana	cytosol	47.83	37.38
GSMUA_Achr8P19910_001	Banana	mitochondrion	48.45	37.32
GSMUA_Achr8P14780_001	Banana	cytosol	47.2	36.89
GSMUA_Achr8P21220_001	Banana	cytosol	38.51	36.47
Solyc02g076770.1.1	Tomato	cytosol	49.07	36.24
GSMUA_Achr2P15420_001	Banana	cytosol, mitochondrion, nucleus, plastid	49.07	34.65
GSMUA_Achr10P...	Banana	cytosol, plastid	40.99	33.33

Protein Annotations

EnsemblPlants:GSMUA_Achr4P10630_001	EnsemblPlants:GSMUA_Achr4T10630_001	EnsemblPlantsGene:GSMUA_Achr4G10630_001	Gene3D:3.30.530.20	InterPro:IPR023393	InterPro:Polyketide_cyclase/dehydratase
InterPro:START-like_dom_sf	PANTHER:PTHR31213	PANTHER:PTHR31213:SF3	PFAM:PF10604	SEG:seg	SUPFAM:SSF55961
UniParc:UPI0002952751	UniProt:M0SMT0	MapMan:11.1.2.1.1.1	:	:	:

Description

Abscisic acid receptor PYL5 [Source:GMGC_GENE;Acc:GSMUA_Achr4G10630_001]

Coordinates

chr4:-:7717086..7717571

Molecular Weight (calculated)

17823.2 Da

IEP (calculated)

7.235

GRAVY (calculated)

-0.230

Length

161 amino acids

Sequence
(BLAST)

001: MHEVMRRYHS RHKAPGQCGS ANVQYFAAPL LVVWSLLRRF DRPQDHKRFH KGCRLRAGDG RVGSVREVTL VSGLPAGTST EWHVISFSVL GGDHRLSNYQ
101: STTSLHEGGE GEGTVVVESY VVDVPPGNTE EDTCVFVDTI IRCNLISLAS VAERMAVYEL P

Best Arabidopsis Sequence Match ( AT2G26040.1 )
(BLAST)

001: MSSSPAVKGL TDEEQKTLEP VIKTYHQFEP DPTTCTSLIT QRIHAPASVV WPLIRRFDNP ERYKHFVKRC RLISGDGDVG SVREVTVISG LPASTSTERL
101: EFVDDDHRVL SFRVVGGEHR LKNYKSVTSV NEFLNQDSGK VYTVVLESYT VDIPEGNTEE DTKMFVDTVV KLNLQKLGVA ATSAPMHDDE

Arabidopsis Description

PYL2Abscisic acid receptor PYL2 [Source:UniProtKB/Swiss-Prot;Acc:O80992]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.