Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78879 | Canola | cytosol | 99.4 | 99.4 |
| CDX99450 | Canola | cytosol | 99.4 | 99.4 |
| AT4G18620.1 | Thale cress | cytosol | 78.31 | 79.27 |
| CDY58053 | Canola | cytosol | 60.84 | 62.35 |
| CDY68675 | Canola | cytosol | 60.84 | 62.35 |
| GSMUA_Achr4P10630_001 | Banana | mitochondrion | 48.8 | 50.31 |
| KRH21267 | Soybean | cytosol | 50.0 | 44.86 |
| KRH11022 | Soybean | cytosol | 48.8 | 43.78 |
| CDY54415 | Canola | cytosol | 51.2 | 41.67 |
| CDY18391 | Canola | plastid | 51.2 | 41.67 |
| CDY04951 | Canola | cytosol | 49.4 | 41.62 |
| CDX91449 | Canola | plastid | 51.81 | 41.55 |
| CDY14471 | Canola | plastid | 51.2 | 41.06 |
| CDY07739 | Canola | plastid | 51.2 | 41.06 |
| CDY72318 | Canola | cytosol | 50.0 | 40.89 |
| CDX76731 | Canola | cytosol | 45.78 | 40.43 |
| CDY11503 | Canola | cytosol | 45.78 | 40.43 |
| CDX93191 | Canola | cytosol | 49.4 | 40.39 |
| CDY54453 | Canola | plastid | 50.6 | 40.38 |
| CDY70860 | Canola | cytosol | 45.18 | 40.32 |
| CDY52923 | Canola | cytosol | 49.4 | 40.0 |
| CDX80959 | Canola | cytosol | 48.8 | 39.9 |
| CDX90440 | Canola | cytosol | 45.18 | 39.27 |
| CDY69797 | Canola | cytosol | 45.18 | 39.27 |
| CDY01498 | Canola | cytosol | 45.18 | 39.27 |
| CDX70150 | Canola | cytosol | 48.19 | 39.22 |
| CDX98844 | Canola | cytosol | 47.59 | 38.73 |
| CDY07608 | Canola | cytosol, mitochondrion | 49.4 | 38.68 |
| PGSC0003DMT400026521 | Potato | cytosol | 43.98 | 38.22 |
| CDX74796 | Canola | cytosol, nucleus, plastid | 48.8 | 38.21 |
| CDY24911 | Canola | cytosol, mitochondrion | 48.8 | 38.03 |
| CDY18867 | Canola | cytosol, mitochondrion, nucleus, plastid | 47.59 | 37.26 |
| CDX90028 | Canola | cytosol | 42.17 | 37.23 |
| CDY15183 | Canola | cytosol | 41.57 | 36.9 |
| CDX89219 | Canola | cytosol | 40.96 | 36.76 |
| CDY04688 | Canola | cytosol | 40.96 | 36.56 |
| CDY70517 | Canola | cytosol | 40.36 | 36.22 |
| CDY58505 | Canola | nucleus | 45.78 | 36.19 |
| CDY25052 | Canola | cytosol | 40.36 | 35.83 |
| CDX96197 | Canola | cytosol | 40.36 | 35.64 |
| CDX77691 | Canola | nucleus | 45.78 | 35.35 |
| CDY49462 | Canola | cytosol | 39.16 | 35.33 |
| CDY53905 | Canola | cytosol | 39.76 | 35.29 |
| CDY27022 | Canola | cytosol | 39.76 | 35.11 |
| CDY64350 | Canola | cytosol | 38.55 | 34.97 |
| CDY61488 | Canola | cytosol | 38.55 | 34.78 |
| CDY38728 | Canola | cytosol | 38.55 | 34.78 |
| CDX74368 | Canola | cytosol | 39.76 | 34.2 |
| CDX76554 | Canola | cytosol | 31.93 | 34.19 |
| Solyc02g076770.1.1 | Tomato | cytosol | 44.58 | 33.95 |
| CDX91871 | Canola | cytosol | 39.16 | 33.68 |
| GSMUA_Achr4P15170_001 | Banana | cytosol | 50.6 | 33.6 |
| CDY08877 | Canola | cytosol | 31.33 | 33.55 |
| CDY07165 | Canola | cytosol | 11.45 | 31.67 |
| CDY68316 | Canola | nucleus | 35.54 | 30.89 |
| CDY03194 | Canola | nucleus | 35.54 | 30.89 |
| CDY22516 | Canola | plastid | 37.95 | 30.73 |
| CDY48030 | Canola | plastid | 37.95 | 30.73 |
| CDX82120 | Canola | plastid | 37.95 | 30.73 |
Protein Annotations
| EnsemblPlants:CDY58019 | EnsemblPlantsGene:GSBRNA2T00023010001 | Gene3D:3.30.530.20 | InterPro:IPR023393 | InterPro:Polyketide_cyclase/dehydratase | InterPro:START-like_dom_sf |
| PANTHER:PTHR31213 | PANTHER:PTHR31213:SF8 | PFAM:PF10604 | ProteinID:CDY58019 | ProteinID:CDY58019.1 | SUPFAM:SSF55961 |
| UniParc:UPI0004EF1E28 | UniProt:A0A078J5A1 | MapMan:11.1.2.1.1.1 | : | : | : |
Description
BnaC07g48850DBnaC07g48850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J5A1]
Coordinates
chrLK033626:-:24110..24610
Molecular Weight (calculated)
18414.8 Da
IEP (calculated)
5.071
GRAVY (calculated)
-0.248
Length
166 amino acids
Sequence
(BLAST)
(BLAST)
001: MESSERKRCR STVVETIEAP LSLVWSILRR FDRPQAYKRF VKSCTIRFNG DGDGGEGSVR DVALVSGVPG NFSTERLDEL DDESHVMVVS IIGGNHRLVN
101: FTSKTMVVAS PDDESDKTVV VESYIVDVPE GNSEEDTILF VDTIIRYNLV SLAKLTKKKM GHSTSV
101: FTSKTMVVAS PDDESDKTVV VESYIVDVPE GNSEEDTILF VDTIIRYNLV SLAKLTKKKM GHSTSV
001: MESSKQKRCR SSVVETIEAP LPLVWSILRS FDKPQAYQRF VKSCTMRSGG GGGKGGEGKG SVRDVTLVSG FPADFSTERL EELDDESHVM VVSIIGGNHR
101: LVNYKSKTKV VASPEDMAKK TVVVESYVVD VPEGTSEEDT IFFVDNIIRY NLTSLAKLTK KMMK
101: LVNYKSKTKV VASPEDMAKK TVVVESYVVD VPEGTSEEDT IFFVDNIIRY NLTSLAKLTK KMMK
Arabidopsis Description
PYL13RCAR7 [Source:UniProtKB/TrEMBL;Acc:A0A178V4P0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.