Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G27920.1 | CDX72943 | AT1G72770.1 | 19407142 |
| AT4G27920.1 | CDX96432 | AT1G72770.1 | 19407142 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89219 | Canola | cytosol | 96.76 | 96.76 |
| AT4G27920.1 | Thale cress | cytosol | 79.46 | 80.33 |
| CDY61488 | Canola | cytosol | 72.97 | 73.37 |
| CDY49462 | Canola | cytosol | 72.43 | 72.83 |
| Solyc03g007310.2.1 | Tomato | cytosol | 71.89 | 71.89 |
| CDY38728 | Canola | cytosol | 71.35 | 71.74 |
| CDY64350 | Canola | cytosol | 70.81 | 71.58 |
| VIT_16s0050g02620.t01 | Wine grape | cytosol | 71.35 | 71.35 |
| PGSC0003DMT400023511 | Potato | cytosol | 70.81 | 70.81 |
| CDX96197 | Canola | cytosol | 71.35 | 70.21 |
| CDY27022 | Canola | cytosol | 70.27 | 69.15 |
| KRH65845 | Soybean | cytosol | 71.35 | 68.39 |
| KRH18155 | Soybean | cytosol | 70.27 | 68.06 |
| CDY25052 | Canola | cytosol | 66.49 | 65.78 |
| GSMUA_Achr10P... | Banana | cytosol | 65.41 | 65.05 |
| GSMUA_Achr2P19970_001 | Banana | cytosol | 64.86 | 64.52 |
| KRH53449 | Soybean | cytosol | 66.49 | 64.4 |
| GSMUA_Achr10P... | Banana | cytosol | 63.24 | 62.9 |
| CDY04688 | Canola | cytosol | 62.7 | 62.37 |
| CDY15183 | Canola | cytosol | 62.7 | 62.03 |
| CDY53905 | Canola | cytosol | 62.7 | 62.03 |
| CDX90028 | Canola | cytosol | 62.7 | 61.7 |
| HORVU0Hr1G032390.2 | Barley | cytosol, extracellular | 28.11 | 60.47 |
| GSMUA_AchrUn_... | Banana | cytosol | 60.54 | 60.22 |
| CDX74368 | Canola | cytosol | 62.7 | 60.1 |
| CDX91871 | Canola | cytosol | 62.16 | 59.59 |
| GSMUA_Achr3P03480_001 | Banana | cytosol | 65.95 | 59.22 |
| EES17886 | Sorghum | cytosol | 62.16 | 58.38 |
| Os02t0255500-01 | Rice | cytosol | 64.32 | 58.33 |
| Zm00001d010445_P001 | Maize | cytosol | 61.62 | 57.87 |
| Zm00001d037719_P001 | Maize | cytosol | 61.62 | 57.87 |
| GSMUA_Achr8P19910_001 | Banana | mitochondrion | 63.78 | 56.46 |
| TraesCS1D01G126900.1 | Wheat | cytosol | 61.62 | 55.61 |
| TraesCS1B01G145800.1 | Wheat | cytosol | 61.62 | 55.61 |
| TraesCS1A01G126800.1 | Wheat | cytosol | 61.62 | 55.61 |
| Zm00001d016105_P001 | Maize | cytosol | 63.24 | 55.19 |
| Os05t0213500-01 | Rice | cytosol, nucleus | 62.16 | 55.02 |
| CDY07165 | Canola | cytosol | 17.84 | 55.0 |
| EES04864 | Sorghum | cytosol | 62.16 | 54.5 |
| Zm00001d002533_P001 | Maize | cytosol | 36.22 | 53.17 |
| KRH65286 | Soybean | cytosol | 25.95 | 52.75 |
| Zm00001d053396_P001 | Maize | cytosol | 61.08 | 52.07 |
| GSMUA_Achr2P15420_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 63.78 | 51.75 |
| Os02t0255300-00 | Rice | cytosol, plastid | 49.73 | 51.11 |
| KRH16733 | Soybean | cytosol | 28.11 | 49.52 |
| Os06t0528300-00 | Rice | cytosol | 53.51 | 48.06 |
| Os06t0527800-01 | Rice | cytosol | 52.97 | 47.57 |
| Os06t0526400-00 | Rice | cytosol | 50.27 | 47.45 |
| TraesCS7B01G232100.1 | Wheat | cytoskeleton, cytosol, nucleus | 49.19 | 46.67 |
| TraesCS7D01G328000.1 | Wheat | cytosol | 48.11 | 45.18 |
| HORVU7Hr1G079270.1 | Barley | cytosol | 48.11 | 45.18 |
| CDY58053 | Canola | cytosol | 39.46 | 45.06 |
| CDY68675 | Canola | cytosol | 39.46 | 45.06 |
| TraesCS7A01G350800.1 | Wheat | cytosol | 45.95 | 43.15 |
| CDY04951 | Canola | cytosol | 44.86 | 42.13 |
| CDX76731 | Canola | cytosol | 42.16 | 41.49 |
| CDY11503 | Canola | cytosol | 42.16 | 41.49 |
| CDX91449 | Canola | plastid | 45.95 | 41.06 |
| CDY70860 | Canola | cytosol | 41.08 | 40.86 |
| CDX70150 | Canola | cytosol | 44.86 | 40.69 |
| CDX98844 | Canola | cytosol | 44.86 | 40.69 |
| CDY14471 | Canola | plastid | 45.41 | 40.58 |
| CDY07739 | Canola | plastid | 45.41 | 40.58 |
| CDY54453 | Canola | plastid | 45.41 | 40.38 |
| CDX99450 | Canola | cytosol | 36.22 | 40.36 |
| CDY58019 | Canola | cytosol | 36.22 | 40.36 |
| CDX78879 | Canola | cytosol | 36.22 | 40.36 |
| CDY54415 | Canola | cytosol | 44.32 | 40.2 |
| CDY18391 | Canola | plastid | 44.32 | 40.2 |
| CDY72318 | Canola | cytosol | 43.78 | 39.9 |
| CDY01498 | Canola | cytosol | 41.08 | 39.79 |
| CDY69797 | Canola | cytosol | 41.08 | 39.79 |
| CDX90440 | Canola | cytosol | 41.08 | 39.79 |
| CDX80959 | Canola | cytosol | 43.24 | 39.41 |
| HORVU1Hr1G030390.2 | Barley | extracellular, mitochondrion, plasma membrane | 61.62 | 39.18 |
| HORVU3Hr1G054230.1 | Barley | mitochondrion | 33.51 | 38.99 |
| CDX93191 | Canola | cytosol | 41.62 | 37.93 |
| CDY52923 | Canola | cytosol | 41.62 | 37.56 |
| CDY58505 | Canola | nucleus | 42.16 | 37.14 |
| CDX76554 | Canola | cytosol | 30.81 | 36.77 |
| CDX77691 | Canola | nucleus | 42.16 | 36.28 |
| CDY24911 | Canola | cytosol, mitochondrion | 41.62 | 36.15 |
| CDY08877 | Canola | cytosol | 30.27 | 36.13 |
| CDY07608 | Canola | cytosol, mitochondrion | 41.08 | 35.85 |
| CDY18867 | Canola | cytosol, mitochondrion, nucleus, plastid | 40.54 | 35.38 |
| CDX74796 | Canola | cytosol, nucleus, plastid | 40.54 | 35.38 |
| CDY68316 | Canola | nucleus | 35.68 | 34.55 |
| CDY03194 | Canola | nucleus | 35.14 | 34.03 |
| CDY48030 | Canola | plastid | 36.22 | 32.68 |
| CDX82120 | Canola | plastid | 35.68 | 32.2 |
| CDY22516 | Canola | plastid | 35.68 | 32.2 |
| Os06t0526466-00 | Rice | cytosol, mitochondrion | 22.16 | 29.71 |
Protein Annotations
| EnsemblPlants:CDY70517 | EnsemblPlantsGene:GSBRNA2T00003945001 | Gene3D:3.30.530.20 | InterPro:IPR023393 | InterPro:Polyketide_cyclase/dehydratase | InterPro:START-like_dom_sf |
| PANTHER:PTHR31213 | PANTHER:PTHR31213:SF12 | PFAM:PF10604 | ProteinID:CDY70517 | ProteinID:CDY70517.1 | SUPFAM:SSF55961 |
| UniParc:UPI0004EE0E35 | UniProt:A0A078JXY0 | MapMan:11.1.2.1.1.1 | : | : | : |
Description
BnaCnng68710DBnaCnng68710D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JXY0]
Coordinates
chrLK042360:+:1339..2104
Molecular Weight (calculated)
20735.9 Da
IEP (calculated)
6.028
GRAVY (calculated)
-0.146
Length
185 amino acids
Sequence
(BLAST)
(BLAST)
001: MMNADETKNV ESEYIKMHHA HGELLESHCS STLVKHIKAP LHLVWSLVRR FDQPQKYKPF ISGCVVKDKK LEIGSVREVD VRSGLPATKS TEILEFLDDN
101: QHVLSIRIVG GDHRLKNYSS VISLHPETIE GRAGTLVIES FVVDVAEGNT KEETCFFVEA LIQCNLKSLA YVSESLEAES IAQMV
101: QHVLSIRIVG GDHRLKNYSS VISLHPETIE GRAGTLVIES FVVDVAEGNT KEETCFFVEA LIQCNLKSLA YVSESLEAES IAQMV
001: MNGDETKKVE SEYIKKHHRH ELVESQCSST LVKHIKAPLH LVWSIVRRFD EPQKYKPFIS RCVVQGKKLE VGSVREVDLK SGLPATKSTE VLEILDDNEH
101: ILGIRIVGGD HRLKNYSSTI SLHSETIDGK TGTLAIESFV VDVPEGNTKE ETCFFVEALI QCNLNSLADV TERLQAESME KKI
101: ILGIRIVGGD HRLKNYSSTI SLHSETIDGK TGTLAIESFV VDVPEGNTKE ETCFFVEALI QCNLNSLADV TERLQAESME KKI
Arabidopsis Description
PYL10RCAR4 [Source:UniProtKB/TrEMBL;Acc:A0A178V0C5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.