Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76554 | Canola | cytosol | 96.77 | 96.77 |
| Bra021032.1-P | Field mustard | cytosol | 96.77 | 95.54 |
| CDY69797 | Canola | cytosol | 92.26 | 74.87 |
| CDY70860 | Canola | cytosol | 89.03 | 74.19 |
| CDY01498 | Canola | cytosol | 89.68 | 72.77 |
| CDX90440 | Canola | cytosol | 89.03 | 72.25 |
| AT4G17870.1 | Thale cress | cytosol | 87.1 | 70.68 |
| CDY58505 | Canola | nucleus | 72.9 | 53.81 |
| CDX77691 | Canola | nucleus | 72.9 | 52.56 |
| CDY68316 | Canola | nucleus | 60.0 | 48.69 |
| CDY03194 | Canola | nucleus | 60.0 | 48.69 |
| Solyc06g061180.1.1 | Tomato | nucleus | 65.16 | 47.42 |
| PGSC0003DMT400005378 | Potato | nucleus | 64.52 | 46.95 |
| KRH45453 | Soybean | cytosol | 62.58 | 45.75 |
| GSMUA_Achr4P19170_001 | Banana | cytosol | 56.77 | 45.36 |
| KRH75621 | Soybean | cytosol | 62.58 | 45.33 |
| GSMUA_Achr8P14780_001 | Banana | cytosol | 56.13 | 42.23 |
| VIT_02s0012g01270.t01 | Wine grape | cytosol | 71.61 | 42.05 |
| CDX76731 | Canola | cytosol | 50.97 | 42.02 |
| CDY11503 | Canola | cytosol | 49.68 | 40.96 |
| TraesCS1A01G191700.1 | Wheat | cytosol | 54.84 | 40.28 |
| TraesCS1D01G195300.1 | Wheat | cytosol | 54.84 | 39.91 |
| Zm00001d030045_P001 | Maize | cytosol | 54.19 | 39.62 |
| TraesCS1B01G206600.1 | Wheat | cytosol, unclear | 54.19 | 39.44 |
| Zm00001d047037_P001 | Maize | cytosol | 51.61 | 39.02 |
| Os10t0573400-01 | Rice | plasma membrane | 52.9 | 38.68 |
| OQU92088 | Sorghum | cytosol | 52.26 | 38.21 |
| CDY68675 | Canola | cytosol | 37.42 | 35.8 |
| CDY58053 | Canola | cytosol | 37.42 | 35.8 |
| CDY22516 | Canola | plastid | 47.1 | 35.61 |
| CDX82120 | Canola | plastid | 47.1 | 35.61 |
| CDY48030 | Canola | plastid | 47.1 | 35.61 |
| CDY07165 | Canola | cytosol | 13.55 | 35.0 |
| CDY49462 | Canola | cytosol | 38.71 | 32.61 |
| CDY18391 | Canola | plastid | 42.58 | 32.35 |
| CDY54415 | Canola | cytosol | 42.58 | 32.35 |
| CDY64350 | Canola | cytosol | 38.06 | 32.24 |
| CDY61488 | Canola | cytosol | 38.06 | 32.07 |
| CDY38728 | Canola | cytosol | 38.06 | 32.07 |
| CDX91449 | Canola | plastid | 42.58 | 31.88 |
| CDY54453 | Canola | plastid | 42.58 | 31.73 |
| CDY07739 | Canola | plastid | 41.94 | 31.4 |
| CDY14471 | Canola | plastid | 41.94 | 31.4 |
| CDY58019 | Canola | cytosol | 33.55 | 31.33 |
| CDX78879 | Canola | cytosol | 33.55 | 31.33 |
| CDY04951 | Canola | cytosol | 39.35 | 30.96 |
| CDX99450 | Canola | cytosol | 32.9 | 30.72 |
| HORVU1Hr1G050110.1 | Barley | plastid | 54.19 | 30.66 |
| CDY25052 | Canola | cytosol | 36.77 | 30.48 |
| CDX96197 | Canola | cytosol | 36.77 | 30.32 |
| CDY70517 | Canola | cytosol | 36.13 | 30.27 |
| CDY53905 | Canola | cytosol | 36.13 | 29.95 |
| CDY27022 | Canola | cytosol | 36.13 | 29.79 |
| CDX89219 | Canola | cytosol | 35.48 | 29.73 |
| CDX98844 | Canola | cytosol | 38.71 | 29.41 |
| CDY15183 | Canola | cytosol | 35.48 | 29.41 |
| CDX90028 | Canola | cytosol | 35.48 | 29.26 |
| CDY72318 | Canola | cytosol | 38.06 | 29.06 |
| CDY04688 | Canola | cytosol | 34.84 | 29.03 |
| CDX70150 | Canola | cytosol | 38.06 | 28.92 |
| CDX93191 | Canola | cytosol | 36.77 | 28.08 |
| CDX80959 | Canola | cytosol | 36.77 | 28.08 |
| CDX74368 | Canola | cytosol | 34.84 | 27.98 |
| CDY52923 | Canola | cytosol | 36.77 | 27.8 |
| CDX91871 | Canola | cytosol | 34.19 | 27.46 |
| CDX74796 | Canola | cytosol, nucleus, plastid | 36.13 | 26.42 |
| CDY07608 | Canola | cytosol, mitochondrion | 35.48 | 25.94 |
| CDY24911 | Canola | cytosol, mitochondrion | 34.84 | 25.35 |
| CDY18867 | Canola | cytosol, mitochondrion, nucleus, plastid | 34.19 | 25.0 |
| VIT_04s0008g00270.t01 | Wine grape | cytosol | 36.13 | 19.31 |
| VIT_08s0058g00230.t01 | Wine grape | plastid | 35.48 | 17.08 |
| VIT_13s0175g00110.t01 | Wine grape | plastid | 7.74 | 11.32 |
Protein Annotations
| EnsemblPlants:CDY08877 | EnsemblPlantsGene:GSBRNA2T00000858001 | Gene3D:3.30.530.20 | InterPro:IPR023393 | InterPro:START-like_dom_sf | PANTHER:PTHR31213 |
| PANTHER:PTHR31213:SF6 | ProteinID:CDY08877 | ProteinID:CDY08877.1 | SUPFAM:SSF55961 | UniParc:UPI0004EDD011 | UniProt:A0A078F716 |
| MapMan:11.1.2.1.1.1 | : | : | : | : | : |
Description
BnaC08g11070DBnaC08g11070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F716]
Coordinates
chrLK031990:+:82093..82962
Molecular Weight (calculated)
17250.4 Da
IEP (calculated)
5.267
GRAVY (calculated)
-0.315
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSELTQEER SALAQSIAEF HTYQLGPGSC SSLHAQRIHA PPEIVWSVVR QFDKPQTYKH FIKSCSVEEG FEMRVGCTRD VIVISGLPAN TFEKERRVWT
101: VVLESYVVDM PEGNSEDDTR MFADTVVKLN LQRLATVTEA MARNAAGEGG SSKVT
101: VVLESYVVDM PEGNSEDDTR MFADTVVKLN LQRLATVTEA MARNAAGEGG SSKVT
001: MPSELTPEER SELKNSIAEF HTYQLDPGSC SSLHAQRIHA PPELVWSIVR RFDKPQTYKH FIKSCSVEQN FEMRVGCTRD VIVISGLPAN TSTERLDILD
101: DERRVTGFSI IGGEHRLTNY KSVTTVHRFE KENRIWTVVL ESYVVDMPEG NSEDDTRMFA DTVVKLNLQK LATVAEAMAR NSGDGSGSQV T
101: DERRVTGFSI IGGEHRLTNY KSVTTVHRFE KENRIWTVVL ESYVVDMPEG NSEDDTRMFA DTVVKLNLQK LATVAEAMAR NSGDGSGSQV T
Arabidopsis Description
PYR1Abscisic acid receptor PYR1 [Source:UniProtKB/Swiss-Prot;Acc:O49686]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.