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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 7
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:vacuole
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX76554
CDX90440
CDY01498
CDY07739
CDY08877
CDY14471
CDY69797
CDY70860

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G18340.1 CDY07739 AT2G38310.1 19407142
AT4G18340.1 CDY14471 AT2G38310.1 19407142
AT4G18340.1 CDX76554 AT4G17870.1 19407142
AT4G18340.1 CDX90440 AT4G17870.1 19407142
AT4G18340.1 CDY01498 AT4G17870.1 19407142
AT4G18340.1 CDY08877 AT4G17870.1 19407142
AT4G18340.1 CDY69797 AT4G17870.1 19407142
AT4G18340.1 CDY70860 AT4G17870.1 19407142
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX90405 Canola vacuole 99.24 99.24
Bra012604.1-P Field mustard vacuole 98.99 98.99
CDX99476 Canola vacuole 94.46 93.52
CDX78840 Canola vacuole 94.21 93.27
AT4G18340.1 Thale cress vacuole 91.18 91.18
CDX76528 Canola extracellular, vacuole 88.92 89.14
CDY34065 Canola extracellular, vacuole 88.67 87.13
CDX99881 Canola extracellular, vacuole 58.94 61.9
CDY26296 Canola extracellular, plasma membrane, vacuole 60.96 60.65
CDX90225 Canola vacuole 61.46 60.25
KRH11184 Soybean endoplasmic reticulum, extracellular, vacuole 59.19 59.05
Solyc02g070450.1.1 Tomato endoplasmic reticulum, extracellular, vacuole 58.94 58.65
KRH21069 Soybean vacuole 58.94 58.65
KRG89350 Soybean extracellular, vacuole 58.69 58.25
CDY63842 Canola golgi, vacuole 39.8 54.86
KRH50394 Soybean extracellular, vacuole 59.95 54.71
EER88444 Sorghum extracellular, vacuole 51.64 50.25
Zm00001d046134_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 51.39 50.12
TraesCS7A01G349200.1 Wheat endoplasmic reticulum, extracellular 49.87 48.89
TraesCS7D01G329400.1 Wheat endoplasmic reticulum, extracellular 49.37 48.4
TraesCS7B01G233500.1 Wheat extracellular 49.37 48.4
CDY04498 Canola extracellular, vacuole 43.07 44.3
HORVU7Hr1G079650.7 Barley extracellular, vacuole 48.87 44.19
CDX83270 Canola extracellular, vacuole 42.82 43.59
CDY31181 Canola extracellular, vacuole 42.57 43.33
Os06t0531000-00 Rice vacuole 51.89 41.53
CDX93815 Canola extracellular 42.57 40.82
CDY69080 Canola extracellular 42.57 40.43
CDY21869 Canola plasma membrane 39.29 39.9
CDY20153 Canola plasma membrane 39.29 39.9
CDY13362 Canola extracellular, vacuole 40.05 38.41
CDX83243 Canola vacuole 35.77 37.57
CDX67530 Canola extracellular 40.3 37.47
CDX71449 Canola plasma membrane, vacuole 42.82 37.44
CDY38531 Canola golgi, vacuole 35.52 36.91
CDX92794 Canola endoplasmic reticulum, extracellular 39.55 34.81
CDY56498 Canola extracellular, vacuole 38.29 34.39
CDY46679 Canola extracellular, vacuole 38.29 34.08
CDY06601 Canola endoplasmic reticulum, extracellular 38.54 34.08
CDY20780 Canola extracellular, vacuole 38.54 34.08
CDY18049 Canola extracellular, vacuole 37.78 33.94
CDY17308 Canola extracellular, vacuole 38.29 33.85
CDY36734 Canola extracellular, vacuole 38.54 33.26
CDY12009 Canola extracellular, vacuole 38.54 33.26
CDY19908 Canola extracellular, vacuole 38.29 33.12
CDY30112 Canola cytosol 35.01 32.86
CDY22386 Canola extracellular, vacuole 33.25 30.56
CDX71547 Canola extracellular, vacuole 33.25 30.28
CDX87130 Canola vacuole 35.01 29.89
CDY19838 Canola extracellular, vacuole 35.01 29.76
CDY20461 Canola extracellular 33.0 29.11
CDX69064 Canola extracellular, plasma membrane, vacuole 37.03 29.11
CDY53692 Canola extracellular 32.75 28.95
CDY62387 Canola extracellular 32.75 28.95
CDX75437 Canola extracellular, plasma membrane, vacuole 36.78 28.85
CDY26761 Canola vacuole 37.03 28.71
CDY37244 Canola vacuole 37.03 28.71
CDY08004 Canola vacuole 33.25 28.7
CDY24629 Canola vacuole 33.25 28.7
CDY32869 Canola endoplasmic reticulum, extracellular, plasma membrane 36.27 28.63
CDY64970 Canola extracellular, plasma membrane, vacuole 36.27 28.63
CDY28063 Canola vacuole 33.0 28.48
CDY40219 Canola extracellular 32.24 28.44
CDY53600 Canola extracellular 32.24 28.44
CDY59775 Canola extracellular, vacuole 33.75 28.27
CDX76097 Canola extracellular 31.99 28.16
CDY41232 Canola extracellular 31.99 28.16
CDY14214 Canola endoplasmic reticulum, extracellular, vacuole 36.27 28.07
CDY41234 Canola extracellular 31.99 27.91
CDY02936 Canola extracellular 31.74 27.88
CDY45466 Canola vacuole 32.24 27.83
CDY40218 Canola extracellular 31.74 27.81
CDY50110 Canola extracellular, vacuole 33.25 27.73
CDY18092 Canola extracellular, vacuole 33.25 27.73
CDY01191 Canola extracellular, vacuole 33.5 27.71
CDY12732 Canola extracellular, vacuole 33.5 27.71
CDY63754 Canola extracellular, vacuole 33.25 27.62
CDY08310 Canola extracellular, vacuole 33.25 27.56
CDY06469 Canola extracellular 33.25 27.56
CDY48807 Canola extracellular 34.26 27.36
CDY53213 Canola extracellular, vacuole 33.0 27.29
CDY09427 Canola extracellular 34.01 27.16
CDY62033 Canola extracellular, plasma membrane, vacuole 35.77 26.64
CDY12371 Canola extracellular, vacuole 31.99 26.51
CDY16440 Canola extracellular 33.5 26.39
CDY27122 Canola extracellular, vacuole 31.74 26.3
CDX97707 Canola plastid 36.02 26.05
CDY58676 Canola extracellular, vacuole 33.0 25.99
CDY06818 Canola extracellular, plasma membrane, vacuole 32.49 25.7
CDY67322 Canola extracellular 13.35 23.98
CDY68826 Canola cytosol, endoplasmic reticulum, peroxisome 24.94 23.35
CDY23618 Canola endoplasmic reticulum, plasma membrane, vacuole 24.69 23.28
CDY59252 Canola extracellular, plasma membrane, vacuole 23.68 23.04
CDX74052 Canola vacuole 32.49 22.75
CDY21013 Canola extracellular 29.47 22.54
CDY31214 Canola vacuole 29.47 22.41
Protein Annotations
KEGG:00500+3.2.1.39Gene3D:3.20.20.80MapMan:50.3.2GO:A0A078EK66EnsemblPlants:CDY01532ProteinID:CDY01532
ProteinID:CDY01532.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005975GO:GO:0008150
GO:GO:0008152GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00112558001InterPro:Glyco_hydro_17InterPro:Glycoside_hydrolase_SFPFAM:PF00332
PANTHER:PTHR32227PANTHER:PTHR32227:SF229SUPFAM:SSF51445SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EE7FD9
SEG:seg:::::
Description
BnaC07g35220D
Coordinates
chrLK031927:-:413746..415735
Molecular Weight (calculated)
44199.2 Da
IEP (calculated)
8.514
GRAVY (calculated)
-0.052
Length
397 amino acids
Sequence
(BLAST)
001: MTSRTVARLP NLINVFLLLS LVFSGNILQK ATSLGINYGQ VGNNLPSPDK VINLLRSLRI TKTRIYDTNP QILTSFANSN IEIIVTIENQ VLTLLQDPQQ
101: ALQWVDSHIK PYIPATRITG IMVGNELFTD EDSSLIGYMM PAIINIHKAL VQLGLDRYIE VSSPSSLAVL AESYPPSAGS FKPEVSSVMQ QLLQFLEATR
201: SPFWVNAYPY FAYKDNPNKI PIDYVLFNRN IGMTDPNTRL HYDNMMYAQV DAVAFAAAKL GYRNIEVRVA ETGWPSKGDA GEVGASPTNA ATYNRNLMMR
301: QFAGEGTPAR RNSRLDVYIF ALFNEDMKPG PTSEKNYGIF RPDGSLAYNL GFSTMSTTTA NSESVTYSSY ATKAKMTLEY WTILMLAMIQ VVVSRLI
Best Arabidopsis Sequence Match ( AT4G18340.1 )
(BLAST)
001: MTSRTFTRHS SLIHVFLLLS LVFSGNILQT VTSLGINYGQ VGNNLPSPDK VINLLRSLRI TKTRIYDTNP QILSAFANSN IEIIVTIENQ VLPLLQDPQQ
101: ATQWVDSHIK PYVPATRITG IMVGNELFTD DDSSLIGYMM PAIINIHKAL VQLGLDRYIQ VSSPSSLAVL GESYPPSAGS FKPEVSSVMQ QLLDFLEATK
201: SPFWINAYPY FAYKDNPQEI PVDYVLFNRN IGMTDPNTRL HYDNMMYAQV DAVAFAAAKL GYRNIEVRVA ETGWPSKGDV GEIGASPVNA ATYNRNLMMR
301: QFAGEGTPAR RNARLDVYIF ALFNEDMKPG PTSEKNYGIF QPDGSLAYNL GFSTMSTTTA NSESVTYSSS ATKAKRSLEY WTILILAMVQ VVMLRLF
Arabidopsis Description
Beta-1,3-glucanase-like protein [Source:UniProtKB/TrEMBL;Acc:Q8L837]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.