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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 4
  • golgi 4
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:mitochondrion
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra033641.1-P Field mustard extracellular, vacuole 96.79 97.69
CDY22386 Canola extracellular, vacuole 96.33 97.22
AT5G42720.1 Thale cress extracellular, plasma membrane, vacuole 82.11 81.74
PGSC0003DMT400013154 Potato extracellular, vacuole 57.8 57.14
Solyc04g080260.2.1 Tomato extracellular 57.8 57.14
VIT_18s0001g12390.t01 Wine grape extracellular, vacuole 60.09 56.34
KRH15221 Soybean extracellular 59.17 53.31
Os03t0227400-01 Rice plasma membrane 43.81 52.33
GSMUA_Achr7P26810_001 Banana plastid 34.17 50.34
GSMUA_Achr6P31650_001 Banana extracellular, vacuole 52.52 49.89
CDX75437 Canola extracellular, plasma membrane, vacuole 56.65 48.81
CDX69064 Canola extracellular, plasma membrane, vacuole 56.19 48.51
GSMUA_Achr7P08120_001 Banana plastid 35.09 47.52
HORVU4Hr1G008950.1 Barley vacuole 45.41 47.48
CDY26761 Canola vacuole 55.73 47.46
CDY37244 Canola vacuole 55.73 47.46
TraesCS4A01G260900.2 Wheat extracellular, plasma membrane, vacuole 44.72 46.65
TraesCS4B01G053700.2 Wheat vacuole 44.72 46.65
Os03t0669300-02 Rice endoplasmic reticulum 49.31 46.34
TraesCS4D01G053700.1 Wheat vacuole 44.95 46.34
EER93548 Sorghum vacuole 46.79 45.84
EER95211 Sorghum extracellular, vacuole 45.41 45.83
TraesCS4B01G020100.1 Wheat extracellular 48.17 45.36
TraesCS4A01G293500.1 Wheat plasma membrane 48.39 45.09
TraesCS4A01G077800.1 Wheat vacuole 44.72 44.83
GSMUA_Achr3P30520_001 Banana cytosol, plastid, vacuole 46.79 44.64
Zm00001d013390_P001 Maize extracellular 45.18 44.57
TraesCS4D01G235000.1 Wheat plasma membrane, vacuole 44.72 44.52
HORVU4Hr1G065340.1 Barley extracellular, vacuole 43.81 44.32
Zm00001d013573_P001 Maize extracellular, plasma membrane, vacuole 47.02 44.28
TraesCS4D01G018300.1 Wheat plasma membrane, vacuole 47.71 44.16
KXG37872 Sorghum endoplasmic reticulum, extracellular, vacuole 47.48 43.58
Os03t0722500-01 Rice extracellular, plasma membrane, vacuole 44.27 43.08
TraesCS4B01G233900.2 Wheat plasma membrane, plastid, vacuole 44.04 41.65
CDX99881 Canola extracellular, vacuole 35.32 40.74
HORVU4Hr1G003090.3 Barley extracellular, vacuole 49.54 40.3
CDX93815 Canola extracellular 37.61 39.61
CDY26296 Canola extracellular, plasma membrane, vacuole 36.01 39.35
CDY69080 Canola extracellular 37.39 39.0
CDY04498 Canola extracellular, vacuole 34.4 38.86
CDY63842 Canola golgi, vacuole 25.46 38.54
CDX83270 Canola extracellular, vacuole 33.95 37.95
CDY31181 Canola extracellular, vacuole 33.95 37.95
Zm00001d028331_P001 Maize plastid 45.18 37.88
CDX83243 Canola vacuole 32.8 37.83
CDX90225 Canola vacuole 35.09 37.78
CDY38531 Canola golgi, vacuole 32.57 37.17
CDY20153 Canola plasma membrane 33.26 37.08
CDY21869 Canola plasma membrane 33.26 37.08
CDY13362 Canola extracellular, vacuole 34.4 36.23
CDX67530 Canola extracellular 34.63 35.36
CDY06601 Canola endoplasmic reticulum, extracellular 35.09 34.08
CDY20780 Canola extracellular, vacuole 35.09 34.08
CDY40219 Canola extracellular 35.09 34.0
CDY41232 Canola extracellular 34.86 33.7
CDX87130 Canola vacuole 35.78 33.55
CDY56498 Canola extracellular, vacuole 33.95 33.48
CDX76528 Canola extracellular, vacuole 30.28 33.33
CDX71449 Canola plasma membrane, vacuole 34.63 33.26
CDY01532 Canola vacuole 30.28 33.25
CDY40218 Canola extracellular 34.4 33.11
CDX76097 Canola extracellular 34.17 33.04
CDY18049 Canola extracellular, vacuole 33.49 33.03
CDX90405 Canola vacuole 30.05 33.0
CDY19838 Canola extracellular, vacuole 35.32 32.98
CDY17308 Canola extracellular, vacuole 33.95 32.96
CDX78840 Canola vacuole 30.28 32.92
CDX99476 Canola vacuole 30.28 32.92
CDY41234 Canola extracellular 34.17 32.75
CDY34065 Canola extracellular, vacuole 30.28 32.67
CDY02936 Canola extracellular 33.72 32.52
CDY53692 Canola extracellular 33.49 32.52
CDY62387 Canola extracellular 33.49 32.52
CDY19908 Canola extracellular, vacuole 34.17 32.46
CDY46679 Canola extracellular, vacuole 32.8 32.06
CDY36734 Canola extracellular, vacuole 33.49 31.74
CDY12009 Canola extracellular, vacuole 33.03 31.3
CDY30112 Canola cytosol 30.28 31.21
CDX92794 Canola endoplasmic reticulum, extracellular 32.11 31.04
CDY20461 Canola extracellular 31.42 30.44
CDY53600 Canola extracellular 31.19 30.22
CDY09427 Canola extracellular 33.26 29.18
CDY14214 Canola endoplasmic reticulum, extracellular, vacuole 34.17 29.04
CDY48807 Canola extracellular 33.03 28.97
CDY32869 Canola endoplasmic reticulum, extracellular, plasma membrane 33.26 28.83
CDY64970 Canola extracellular, plasma membrane, vacuole 33.26 28.83
CDY08004 Canola vacuole 30.05 28.48
CDY62033 Canola extracellular, plasma membrane, vacuole 34.63 28.33
CDY24629 Canola vacuole 29.59 28.04
CDY28063 Canola vacuole 29.59 28.04
CDY45466 Canola vacuole 29.36 27.83
CDY06818 Canola extracellular, plasma membrane, vacuole 31.42 27.29
CDY53213 Canola extracellular, vacuole 29.82 27.08
CDY18092 Canola extracellular, vacuole 29.36 26.89
CDY58676 Canola extracellular, vacuole 30.96 26.79
CDY50110 Canola extracellular, vacuole 29.13 26.68
CDY16440 Canola extracellular 30.73 26.59
CDY59775 Canola extracellular, vacuole 28.9 26.58
CDY68826 Canola cytosol, endoplasmic reticulum, peroxisome 25.69 26.42
CDY63754 Canola extracellular, vacuole 28.9 26.36
CDY08310 Canola extracellular, vacuole 28.9 26.3
CDY06469 Canola extracellular 28.67 26.1
CDY01191 Canola extracellular, vacuole 28.67 26.04
CDY21013 Canola extracellular 30.73 25.82
CDY12371 Canola extracellular, vacuole 28.21 25.68
CDY27122 Canola extracellular, vacuole 28.21 25.68
CDY31214 Canola vacuole 30.73 25.67
CDY12732 Canola extracellular, vacuole 27.98 25.42
CDX97707 Canola plastid 30.96 24.59
CDY59252 Canola extracellular, plasma membrane, vacuole 22.02 23.53
CDY23618 Canola endoplasmic reticulum, plasma membrane, vacuole 22.48 23.28
CDY67322 Canola extracellular 11.7 23.08
CDX74052 Canola vacuole 29.82 22.93
Protein Annotations
KEGG:00500+3.2.1.39Gene3D:3.20.20.80MapMan:50.3.2GO:A0A078C3V7EnsemblPlants:CDX71547ProteinID:CDX71547
ProteinID:CDX71547.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005975GO:GO:0008150
GO:GO:0008152GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00148530001InterPro:Glyco_hydro_17InterPro:Glycoside_hydrolase_SFPFAM:PF00332
PANTHER:PTHR32227PANTHER:PTHR32227:SF221SUPFAM:SSF51445SignalP:SignalP-noTMUniParc:UPI0004EEEC53SEG:seg
Description
BnaC04g17820D
Coordinates
chrLK031793:-:2713273..2717277
Molecular Weight (calculated)
47111.7 Da
IEP (calculated)
7.537
GRAVY (calculated)
-0.042
Length
436 amino acids
Sequence
(BLAST)
001: MEASVYRFFL LFFLCLYGLP QTKSQPFIGV NYGQTADNLP PPSATAKLLR STTIQKVRLY GSDPAIIKAL ANTGIEIVIG TGDVPGLASD PSFARSWVET
101: NVVPYYPASK ITLIDVGNEA TTFGDRNFML QLLPAMKNVQ SALEAASLGG KIKVSTVHTM SILSQSDPPS AGVFAADHAD ILKGLLEFNR ETGSPFAVNP
201: YPFFAYQSDP RPRAGFRTLA FCLFQPNPGR VDANSKIKYM NMFDAQVDAV YSALSSFGFK DVEIVVAETG WPYKGDPDEV GTTIENAKAY NKNLIAHLKS
301: MAGTPLMPGK VIETYLFALY DENLKPGKGS ERAFGLFKPD VTMTYDIGLT KTTNQTSMAP QSPMPRLPPA AAPTSQTIPA PPQMILPSPT SPSDKNSGQT
401: DVHNSTPRSA SLAHLCSSLS VPSMMLFVSV MYALIM
Best Arabidopsis Sequence Match ( AT5G42720.1 )
(BLAST)
001: MRASVYSLIL LFFSCLLHLS KSQPFLGVNY GLTADNLPPP SASAKLLQST TFQKVRLYGS DPAVIKALAN TGIEIVIGAS NGDVPGLASD PSFARSWVET
101: NVVPYYPASK IVLIAVGNEI TSFGDNSLMS QLLPAMKNVQ TALEAASLGG GKIKVSTVHI MSVLAGSDPP STAVFKPEHA DILKGLLEFN SETGSPFAVN
201: PYPFFAYQDD RRPETLAYCL FQANPGRVDP NSNLKYMNMF DAQVDAVYSA LNSMGFKDVE IMVAETGWPY KGDPEEAGAT VENARAYNKN LIAHLKSGSG
301: TPLMPGRVID TYLFALYDEN LKPGKGSERA FGLFRPDLTM TYDIGLTKTT NYNQTSMAPL SPTRPRLPPA AAPTRQTLPS PPQMILPSPV TPSDKNSGQT
401: DVHNSTPRSA SLAHICRSLS ISASMFFVSV LYALIILL
Arabidopsis Description
Glycosyl hydrolase family 17 protein [Source:UniProtKB/TrEMBL;Acc:Q8VY12]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.