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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, vacuole

Predictor Summary:
  • extracellular 5
  • golgi 5
  • plasma membrane 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane, vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY04498 Canola extracellular, vacuole 81.72 96.11
CDX83270 Canola extracellular, vacuole 78.19 91.03
CDY31181 Canola extracellular, vacuole 77.97 90.77
AT2G27500.1 Thale cress vacuole 75.99 88.01
KRH22675 Soybean vacuole 55.51 64.29
Solyc11g068440.1.1 Tomato extracellular 51.98 62.11
PGSC0003DMT400067771 Potato extracellular, plasma membrane, vacuole 51.98 61.62
KRH25239 Soybean extracellular, plasma membrane, vacuole 52.42 60.71
KRH30421 Soybean extracellular, plasma membrane, vacuole 51.54 59.54
KRH26646 Soybean extracellular, plasma membrane, vacuole 54.63 58.08
VIT_06s0080g00420.t01 Wine grape extracellular, mitochondrion, plastid, vacuole 52.2 57.8
GSMUA_Achr6P13230_001 Banana vacuole 42.73 57.74
GSMUA_Achr11P... Banana vacuole 48.24 56.88
TraesCS3B01G278400.1 Wheat extracellular, vacuole 48.46 56.27
TraesCS2D01G292500.1 Wheat extracellular, plasma membrane, vacuole 48.24 56.15
TraesCS2B01G311200.1 Wheat extracellular, plasma membrane, vacuole 48.02 55.75
TraesCS2A01G294700.1 Wheat plasma membrane 47.58 55.38
Os01t0860800-01 Rice extracellular 48.24 55.03
TraesCS3A01G249500.1 Wheat vacuole 47.14 54.31
Os02t0532900-01 Rice endoplasmic reticulum, extracellular 46.48 53.96
EES01795 Sorghum extracellular, plasma membrane, vacuole 47.58 52.94
EES10741 Sorghum golgi, plasma membrane, vacuole 47.8 52.93
Zm00001d003784_P001 Maize endoplasmic reticulum, extracellular, vacuole 45.81 52.66
HORVU3Hr1G067280.5 Barley plasma membrane 48.9 52.11
Os04t0412300-01 Rice plasma membrane, plastid, vacuole 46.7 52.09
TraesCS3D01G366700.2 Wheat endoplasmic reticulum, vacuole 46.26 51.85
TraesCS3B01G406200.2 Wheat extracellular, plasma membrane, vacuole 46.48 51.72
EES05179 Sorghum plastid 46.48 51.59
Zm00001d010137_P001 Maize extracellular 45.59 51.11
HORVU3Hr1G084170.1 Barley extracellular, vacuole 46.26 51.09
TraesCS3A01G374000.2 Wheat endoplasmic reticulum, extracellular 45.81 50.98
EES18301 Sorghum golgi, plasma membrane, vacuole 46.04 50.98
TraesCS3D01G249500.1 Wheat vacuole 47.8 50.47
Zm00001d042767_P001 Maize plasma membrane 45.81 50.24
Zm00001d000117_P001 Maize plastid, vacuole 43.17 49.37
CDX93815 Canola extracellular 43.61 47.83
TraesCS1D01G275700.1 Wheat endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 42.73 47.67
TraesCS1A01G276200.1 Wheat vacuole 42.73 47.32
TraesCS1B01G285400.2 Wheat mitochondrion, plasma membrane, plastid, vacuole 42.73 47.2
CDY69080 Canola extracellular 43.39 47.13
CDX99881 Canola extracellular, vacuole 38.11 45.77
Zm00001d012292_P001 Maize mitochondrion 42.07 44.84
CDY63842 Canola golgi, vacuole 28.19 44.44
CDY13362 Canola extracellular, vacuole 40.31 44.2
GSMUA_Achr10P... Banana mitochondrion 36.34 44.12
CDY26296 Canola extracellular, plasma membrane, vacuole 38.77 44.11
CDX78840 Canola vacuole 38.77 43.89
CDX99476 Canola vacuole 38.77 43.89
CDX90405 Canola vacuole 37.89 43.32
CDX67530 Canola extracellular 40.53 43.09
HORVU1Hr1G073820.3 Barley mitochondrion, peroxisome, plastid, vacuole 42.95 42.86
CDY01532 Canola vacuole 37.44 42.82
CDX90225 Canola vacuole 38.11 42.72
CDY21869 Canola plasma membrane 36.34 42.2
CDY20153 Canola plasma membrane 36.12 41.94
CDX76528 Canola extracellular, vacuole 36.56 41.92
CDX83243 Canola vacuole 34.58 41.53
HORVU2Hr1G072890.1 Barley mitochondrion 48.46 41.2
CDY34065 Canola extracellular, vacuole 36.34 40.84
CDY38531 Canola golgi, vacuole 34.14 40.58
CDY20780 Canola extracellular, vacuole 35.46 35.86
CDY06601 Canola endoplasmic reticulum, extracellular 35.24 35.63
CDY17308 Canola extracellular, vacuole 35.24 35.63
CDY56498 Canola extracellular, vacuole 34.36 35.29
CDY18049 Canola extracellular, vacuole 34.14 35.07
CDX71547 Canola extracellular, vacuole 33.26 34.63
CDY19908 Canola extracellular, vacuole 34.8 34.42
CDY46679 Canola extracellular, vacuole 33.7 34.3
CDX92794 Canola endoplasmic reticulum, extracellular 33.92 34.15
CDY22386 Canola extracellular, vacuole 32.38 34.03
CDY36734 Canola extracellular, vacuole 34.36 33.91
CDY12009 Canola extracellular, vacuole 34.14 33.7
CDY30112 Canola cytosol 30.62 32.86
CDX87130 Canola vacuole 31.94 31.18
CDY26761 Canola vacuole 34.8 30.86
CDY19838 Canola extracellular, vacuole 31.72 30.84
CDY37244 Canola vacuole 34.58 30.66
CDX76097 Canola extracellular 30.4 30.6
CDY62387 Canola extracellular 30.18 30.51
CDY53692 Canola extracellular 29.96 30.29
CDY20461 Canola extracellular 29.96 30.22
CDY02936 Canola extracellular 29.96 30.09
CDY41232 Canola extracellular 29.74 29.93
CDY40219 Canola extracellular 29.52 29.78
CDY53600 Canola extracellular 29.52 29.78
CDX69064 Canola extracellular, plasma membrane, vacuole 33.04 29.7
CDY41234 Canola extracellular 29.74 29.67
CDX75437 Canola extracellular, plasma membrane, vacuole 32.82 29.45
CDY40218 Canola extracellular 29.3 29.36
CDY14214 Canola endoplasmic reticulum, extracellular, vacuole 32.82 29.04
CDY53213 Canola extracellular, vacuole 30.62 28.96
CDY32869 Canola endoplasmic reticulum, extracellular, plasma membrane 31.94 28.83
CDY64970 Canola extracellular, plasma membrane, vacuole 31.94 28.83
CDY62033 Canola extracellular, plasma membrane, vacuole 33.48 28.52
CDY59775 Canola extracellular, vacuole 29.52 28.27
CDY24629 Canola vacuole 28.41 28.04
CDY63754 Canola extracellular, vacuole 29.52 28.03
CDY08004 Canola vacuole 28.19 27.83
CDY45466 Canola vacuole 28.19 27.83
CDY18092 Canola extracellular, vacuole 29.07 27.73
CDY28063 Canola vacuole 27.97 27.61
CDY50110 Canola extracellular, vacuole 28.85 27.52
CDY01191 Canola extracellular, vacuole 28.85 27.29
CDY12732 Canola extracellular, vacuole 28.63 27.08
CDY06818 Canola extracellular, plasma membrane, vacuole 29.52 26.69
CDY48807 Canola extracellular 29.07 26.56
CDY09427 Canola extracellular 28.85 26.36
CDY58676 Canola extracellular, vacuole 29.07 26.19
CDY08310 Canola extracellular, vacuole 27.53 26.1
CDY16440 Canola extracellular 28.85 25.99
CDY06469 Canola extracellular 27.31 25.89
CDX97707 Canola plastid 31.06 25.68
CDY12371 Canola extracellular, vacuole 26.87 25.47
CDY27122 Canola extracellular, vacuole 26.87 25.47
CDY21013 Canola extracellular 29.07 25.43
CDY68826 Canola cytosol, endoplasmic reticulum, peroxisome 23.57 25.24
CDY31214 Canola vacuole 28.63 24.9
CDX74052 Canola vacuole 28.85 23.1
CDY67322 Canola extracellular 11.23 23.08
CDY59252 Canola extracellular, plasma membrane, vacuole 19.16 21.32
CDY23618 Canola endoplasmic reticulum, plasma membrane, vacuole 18.94 20.43
Protein Annotations
KEGG:00500+3.2.1.39Gene3D:3.20.20.80MapMan:50.3.2GO:A0A078C5K3EnsemblPlants:CDX71449ProteinID:CDX71449
ProteinID:CDX71449.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005975GO:GO:0008150
GO:GO:0008152GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00148304001InterPro:Glyco_hydro_17InterPro:Glycoside_hydrolase_SFPFAM:PF00332
PANTHER:PTHR32227PANTHER:PTHR32227:SF236SUPFAM:SSF51445SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EE7274
SEG:seg:::::
Description
BnaC04g16840D
Coordinates
chrLK031793:+:944350..946850
Molecular Weight (calculated)
50672.2 Da
IEP (calculated)
8.713
GRAVY (calculated)
0.055
Length
454 amino acids
Sequence
(BLAST)
001: MATRILFFFF FKVLLLFLAL SDSFSATSNG QGVGINYGQI ANNLPSPGRV AVLLRSLNIT RVKLYDADPN VLSSFSNSQF DFMIGLGNEF LQNMSTDPTK
101: AQSWIQQRLQ PHITKTRITS IVVGNEIFKT NDRVLISSLL PAMKAVYSAL TNLGLEKQVT VTSAHSLHML QTSYPPSSGS FKQEFIQFLQ PLLDFHSQIK
201: SSFLINAYPF FAYMDSPKEI PLEYVLFQPN QGMVDPNTNL HYDNMLFAQV DALYSAIKTL GHTDVEVRIS ETGWPSKGDE NEIGATPENA ALYNGNLLRL
301: VQQRKGTPGK QSVPIDVYVF ALFNENLKPG PASERNYGLF YPDGKPVYNV GLQGYLPDII YSSSASTIKT LNLWRAVMGL AVAGLIGLDM GVKMRMPLII
401: GLYLVFSPPS RSITTTPCFS FHLSLTAAIL FYNSWSLMFF IPFTTRKHMF NEES
Best Arabidopsis Sequence Match ( AT2G27500.1 )
(BLAST)
001: MATHSLSFFF RVLLLLFLTL SERIKGQGVG INYGQIANNL PSPARVAVLL RSLNITRVKL YDADPNVLFS FSNSQVDFMI GLGNEYLQNM STDPTKAQDW
101: LQQRLEPHIS KTRITSIVVG NEIFKTNDHV LIQSLLPAMK SVYAALTNLG LEKQVTVTSA HSLDILSTSY PPSSGSFKEE FIQYLQPLLD FHSQIESPFL
201: INAYPFFAYK DSPKEVPLEY VLFQPNQGMV DPNTNLHYDN MLFAQVDALY SAIKTLGHTD IEVRISETGW PSKGDENEIG ASPENAALYN GNLLKLIQQR
301: KGTPAKQSVP IDVYVFALFN ENLKPGPVSE RNYGLFYPDG KPVYNVGMQG YLPDIIYTSR ATTIKILNLW RVVMGLAVAW FILDMGDKMR MR
Arabidopsis Description
Glucan endo-1,3-beta-glucosidase 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQG9]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.