Factsheet for VIT_06s0080g00420.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole, plastid, mitochondrion

Predictor Summary:

plastid 2
vacuole 2
mitochondrion 3
cytosol 1
nucleus 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH22675	Soybean	vacuole	65.12	68.11
PGSC0003DMT400067771	Potato	extracellular, plasma membrane, vacuole	60.49	64.75
Solyc11g068440.1.1	Tomato	extracellular	59.76	64.47
KRH25239	Soybean	extracellular, plasma membrane, vacuole	61.46	64.29
KRH30421	Soybean	extracellular, plasma membrane, vacuole	61.46	64.12
KRH26646	Soybean	extracellular, plasma membrane, vacuole	66.1	63.47
CDY04498	Canola	extracellular, vacuole	58.54	62.18
GSMUA_Achr11P...	Banana	vacuole	58.29	62.08
CDX83270	Canola	extracellular, vacuole	58.05	61.03
Bra000508.1-P	Field mustard	extracellular, vacuole	58.05	61.03
CDY31181	Canola	extracellular, vacuole	57.8	60.77
AT2G27500.1	Thale cress	vacuole	58.05	60.71
GSMUA_Achr6P13230_001	Banana	vacuole	48.78	59.52
Bra012015.1-P	Field mustard	plasma membrane, vacuole	57.8	56.83
Os01t0860800-01	Rice	extracellular	55.12	56.78
TraesCS2A01G294700.1	Wheat	plasma membrane	53.66	56.41
TraesCS2D01G292500.1	Wheat	extracellular, plasma membrane, vacuole	53.17	55.9
TraesCS2B01G311200.1	Wheat	extracellular, plasma membrane, vacuole	52.93	55.5
EES18301	Sorghum	golgi, plasma membrane, vacuole	54.15	54.15
Zm00001d010137_P001	Maize	extracellular	53.41	54.07
Os04t0412300-01	Rice	plasma membrane, plastid, vacuole	53.41	53.81
VIT_02s0025g02770.t01	Wine grape	extracellular	52.68	53.33
TraesCS3B01G278400.1	Wheat	extracellular, vacuole	50.73	53.2
Os02t0532900-01	Rice	endoplasmic reticulum, extracellular	50.73	53.2
EES01795	Sorghum	extracellular, plasma membrane, vacuole	52.44	52.7
Zm00001d003784_P001	Maize	endoplasmic reticulum, extracellular, vacuole	50.73	52.66
TraesCS1D01G275700.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	52.2	52.58
TraesCS3A01G249500.1	Wheat	vacuole	50.49	52.54
CDX71449	Canola	plasma membrane, vacuole	57.8	52.2
EES10741	Sorghum	golgi, plasma membrane, vacuole	51.46	51.46
TraesCS1B01G285400.2	Wheat	mitochondrion, plasma membrane, plastid, vacuole	51.46	51.34
Zm00001d042767_P001	Maize	plasma membrane	51.71	51.21
VIT_10s0003g03690.t01	Wine grape	extracellular	46.83	51.2
TraesCS3D01G366700.2	Wheat	endoplasmic reticulum, vacuole	50.49	51.11
EES05179	Sorghum	plastid	50.98	51.1
TraesCS3B01G406200.2	Wheat	extracellular, plasma membrane, vacuole	50.73	50.98
TraesCS1A01G276200.1	Wheat	vacuole	50.98	50.98
TraesCS3A01G374000.2	Wheat	endoplasmic reticulum, extracellular	50.0	50.25
HORVU3Hr1G084170.1	Barley	extracellular, vacuole	49.76	49.63
Zm00001d000117_P001	Maize	plastid, vacuole	47.8	49.37
HORVU3Hr1G067280.5	Barley	plasma membrane	50.98	49.06
TraesCS3D01G249500.1	Wheat	vacuole	50.49	48.14
Zm00001d012292_P001	Maize	mitochondrion	50.0	48.12
HORVU1Hr1G073820.3	Barley	mitochondrion, peroxisome, plastid, vacuole	53.17	47.91
GSMUA_Achr10P...	Banana	mitochondrion	42.44	46.52
VIT_09s0002g06880.t01	Wine grape	vacuole	41.46	42.61
HORVU2Hr1G072890.1	Barley	mitochondrion	54.63	41.95
VIT_11s0016g05560.t01	Wine grape	golgi, vacuole	39.02	40.61
VIT_06s0004g04750.t01	Wine grape	extracellular	33.9	38.61
VIT_18s0001g12390.t01	Wine grape	extracellular, vacuole	40.0	35.27
VIT_16s0098g01560.t01	Wine grape	extracellular	38.29	34.06
VIT_12s0059g01320.t01	Wine grape	extracellular, vacuole	38.05	33.12
VIT_18s0122g00980.t01	Wine grape	extracellular	37.07	33.04
VIT_13s0019g01180.t01	Wine grape	extracellular, vacuole	35.85	32.89
VIT_03s0063g02490.t01	Wine grape	endoplasmic reticulum, extracellular	39.02	32.65
VIT_19s0090g01070.t01	Wine grape	extracellular, plasma membrane, vacuole	37.07	32.27
VIT_11s0016g02960.t01	Wine grape	extracellular, vacuole	35.85	29.76
VIT_05s0062g01430.t01	Wine grape	extracellular, vacuole	33.17	29.12
VIT_01s0011g05500.t01	Wine grape	extracellular, plasma membrane, vacuole	33.66	27.71
VIT_06s0004g00720.t01	Wine grape	extracellular, vacuole	31.71	27.48
VIT_14s0006g00520.t01	Wine grape	extracellular, plasma membrane, vacuole	31.22	25.91
VIT_10s0116g01640.t01	Wine grape	extracellular, vacuole	33.17	23.99

Protein Annotations

KEGG:00500+3.2.1.39	EntrezGene:100257100	wikigene:100257100	Gene3D:3.20.20.80	MapMan:50.3.2	EMBL:AM441512
ProteinID:CAN80621	ProteinID:CAN80621.1	ProteinID:CCB51656	ProteinID:CCB51656.1	UniProt:F6HHG0	EMBL:FN595757
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005886	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0030246	GO:GO:0030247
GO:GO:0046658	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	EntrezGene:LOC100257100	wikigene:LOC100257100	PFAM:PF00332
PANTHER:PTHR32227	PANTHER:PTHR32227:SF236	SUPFAM:SSF51445	TMHMM:TMhelix	UniParc:UPI000210820A	ArrayExpress:VIT_06s0080g00420
EnsemblPlantsGene:VIT_06s0080g00420	EnsemblPlants:VIT_06s0080g00420.t01	RefSeq:XP_002275642	RefSeq:XP_002275642.2	SEG:seg	:

Description

No Description!

Coordinates

chr6:+:20408681..20410669

Molecular Weight (calculated)

44844.5 Da

IEP (calculated)

4.666

GRAVY (calculated)

0.055

Length

410 amino acids

Sequence
(BLAST)

001: MTLIRCWLSA QTLMPGKRDS MPTSSHVFTS FFFFLILSDS VGLIHGIGVG INYGQIANNL PSPSRVAVLL KSLNISRVKL YDADPNVLRA FSNSDVEFII
101: GLPNDNLAAM TDPTKAQAWI QQNVQPFLPQ TKITCITVGN EILSGTDKQL MSNLLPAMQS VHSALVSLEL DDQVGVVTAH SLAILAESFP PSSGSFRQDL
201: GGYLQPLLNF HSQINSPFLI NAYPYFAYKD NPDEVSLDYV LFRPNQGTTD PVTNLKYDNM LYAQIDAVYS AIKAMGHTDI VVRISETGWP SKGDSNEAGA
301: TRDNAGIYNS NLLQRIAENQ STPARPSLPI DIYVFALFNE DLKPGPTSER NYGLYYPDGT PVYDLGLQSQ LPQIASAAFY IDSASTTNAV SIVSLLIFVT
401: LCLIIVREGL

Best Arabidopsis Sequence Match ( AT2G27500.1 )
(BLAST)

001: MATHSLSFFF RVLLLLFLTL SERIKGQGVG INYGQIANNL PSPARVAVLL RSLNITRVKL YDADPNVLFS FSNSQVDFMI GLGNEYLQNM STDPTKAQDW
101: LQQRLEPHIS KTRITSIVVG NEIFKTNDHV LIQSLLPAMK SVYAALTNLG LEKQVTVTSA HSLDILSTSY PPSSGSFKEE FIQYLQPLLD FHSQIESPFL
201: INAYPFFAYK DSPKEVPLEY VLFQPNQGMV DPNTNLHYDN MLFAQVDALY SAIKTLGHTD IEVRISETGW PSKGDENEIG ASPENAALYN GNLLKLIQQR
301: KGTPAKQSVP IDVYVFALFN ENLKPGPVSE RNYGLFYPDG KPVYNVGMQG YLPDIIYTSR ATTIKILNLW RVVMGLAVAW FILDMGDKMR MR

Arabidopsis Description

Glucan endo-1,3-beta-glucosidase 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQG9]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.