Factsheet for VIT_11s0016g02960.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 7
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH41480	Soybean	extracellular, plasma membrane, vacuole	81.78	81.12
KRH60198	Soybean	extracellular, plasma membrane, vacuole	80.97	80.16
PGSC0003DMT400000943	Potato	extracellular, vacuole	77.94	77.62
Solyc12g008580.1.1	Tomato	extracellular	77.73	77.42
AT5G56590.1	Thale cress	extracellular, plasma membrane, vacuole	73.48	71.74
HORVU3Hr1G070400.1	Barley	extracellular, vacuole	66.4	71.62
CDY32869	Canola	endoplasmic reticulum, extracellular, plasma membrane	72.67	71.37
CDY64970	Canola	extracellular, plasma membrane, vacuole	72.67	71.37
Bra002805.1-P	Field mustard	nucleus, plastid, vacuole	70.65	70.94
GSMUA_Achr4P02650_001	Banana	extracellular, vacuole	61.13	70.07
Zm00001d043524_P001	Maize	plasma membrane	69.84	69.56
EES01451	Sorghum	extracellular, plasma membrane, vacuole	69.84	69.42
Os01t0739700-01	Rice	plasma membrane	69.23	69.37
TraesCS3A01G277100.2	Wheat	vacuole	68.22	68.22
TraesCS3D01G277300.4	Wheat	vacuole	68.83	64.15
HORVU3Hr1G070440.12	Barley	plastid	67.41	64.04
TraesCS3B01G311300.2	Wheat	vacuole	68.83	64.03
VIT_14s0006g00520.t01	Wine grape	extracellular, plasma membrane, vacuole	40.08	40.08
VIT_13s0019g01180.t01	Wine grape	extracellular, vacuole	36.23	40.04
VIT_18s0122g00980.t01	Wine grape	extracellular	37.25	40.0
VIT_01s0011g05500.t01	Wine grape	extracellular, plasma membrane, vacuole	40.08	39.76
VIT_19s0090g01070.t01	Wine grape	extracellular, plasma membrane, vacuole	37.45	39.28
VIT_12s0059g01320.t01	Wine grape	extracellular, vacuole	37.25	39.07
VIT_10s0003g03690.t01	Wine grape	extracellular	29.55	38.93
VIT_16s0098g01560.t01	Wine grape	extracellular	35.83	38.39
VIT_06s0004g04750.t01	Wine grape	extracellular	27.94	38.33
VIT_18s0001g12390.t01	Wine grape	extracellular, vacuole	35.83	38.06
VIT_11s0016g05560.t01	Wine grape	golgi, vacuole	29.35	36.8
VIT_02s0025g02770.t01	Wine grape	extracellular	30.16	36.79
VIT_05s0062g01430.t01	Wine grape	extracellular, vacuole	34.21	36.19
VIT_09s0002g06880.t01	Wine grape	vacuole	29.15	36.09
VIT_06s0080g00420.t01	Wine grape	extracellular, mitochondrion, plastid, vacuole	29.76	35.85
VIT_06s0004g00720.t01	Wine grape	extracellular, vacuole	34.01	35.52
VIT_03s0063g02490.t01	Wine grape	endoplasmic reticulum, extracellular	34.01	34.29
VIT_10s0116g01640.t01	Wine grape	extracellular, vacuole	36.84	32.1

Protein Annotations

KEGG:00500+3.2.1.39	EntrezGene:100257740	wikigene:100257740	Gene3D:3.20.20.80	MapMan:50.3.2	ProteinID:CBI27983
ProteinID:CBI27983.3	UniProt:D7TBE8	EMBL:FN595756	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016787	GO:GO:0016798	GO:GO:0030246	GO:GO:0030247
GO:GO:0046658	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	EntrezGene:LOC100257740	wikigene:LOC100257740	PFAM:PF00332
PFAM:PF07983	ScanProsite:PS00587	PANTHER:PTHR32227	PANTHER:PTHR32227:SF88	SMART:SM00768	SUPFAM:SSF51445
SignalP:SignalP-noTM	UniParc:UPI0001984263	ArrayExpress:VIT_11s0016g02960	EnsemblPlantsGene:VIT_11s0016g02960	EnsemblPlants:VIT_11s0016g02960.t01	unigene:Vvi.16263
InterPro:X8	RefSeq:XP_002283473	RefSeq:XP_002283473.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr11:-:2371104..2375284

Molecular Weight (calculated)

53817.7 Da

IEP (calculated)

5.646

GRAVY (calculated)

-0.071

Length

494 amino acids

Sequence
(BLAST)

001: MARGFRLIFA TSLLLTLLGL CRGSTIGVCY GRNADDLPTP DKVAQLVQLH KIKYLRIYDS NIQVLKAFAN TGVELMIGIS NSDLLPFSQF QSNADTWLRN
101: SILPYYPATR ITHITVGAEV TESPNNASSM VVPAMKNVLT ALRKAGLHKK IKVSSTHSLG ILSRSFPPSA GAFNSSHAFF LKPMLEFLAE NQSPFMVDIY
201: PYYAYRDSPN NVSLDYALFE SSSEVIDPNT GLLYTNMFDA QIDALYFALM ALNFRTIKIM VTETGWPSKG SPKETAATPD NAQTYNTNLI RHVINDTGTP
301: AKPGEDLDVY IFSLFNENRK SGLESERNWG LFYPDQTSVY NLDMTGKGAV TMTTETNVTS SNGTWCIASS TASEMDLQNA LDWACGPGNV DCSAIQPSQP
401: CFEPDNVVSH ASFAFNSYYQ QNGATDIACS FGGSGIKVNK NPSYDNCLYM TTGSNKTAAS NATTALASTT TSSAANALFA WTLSCLLMAL LSFL

Best Arabidopsis Sequence Match ( AT5G56590.1 )
(BLAST)

001: MARDFKLIFS ISILLLLLDC CYGGKVGVCY GRSADDLPTP SKVVQLIQQH NIKYVRIYDY NSQVLKAFGN TSIELMIGVP NSDLNAFSQS QSNVDTWLKN
101: SVLPYYPTTK ITYITVGAES TDDPHINASS FVVPAMQNVL TALRKVGLSR RIKVSTTLSL GILSRSFPPS AGAFNSSYAY FLRPMLEFLA ENKSPFMIDL
201: YPYYAYRDSP NNVSLDYVLF ESSSEVIDPN TGLLYKNMFD AQVDALYYAL TALNFRTIKI MVTETGWPTK GSPKEKAAAS SDNAETYNSN IIRHVVTNQG
301: TPAKPGEAMN VYIFSLFNEN RKAGLDSERN WGLFYPDQTS VYQLDFTGKS NGFHSNSSGT NSSGSSNSWC IASSKASERD LKGALDWACG PGNVDCTAIQ
401: PSQPCFQPDT LVSHASFVFN SYFQQNRATD VACSFGGAGV KVNKDPSYDK CIYITAGGNK TKATNATALT SSASTPRGNE LLQWILKLCL MISLFFSLQT
501: MNSQAL

Arabidopsis Description

Glucan endo-1,3-beta-glucosidase 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJU9]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.