Factsheet for TraesCS3D01G277300.4

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G311300.2	Wheat	vacuole	98.11	97.93
TraesCS3A01G277100.2	Wheat	vacuole	90.94	97.57
HORVU3Hr1G070400.1	Barley	extracellular, vacuole	81.51	94.32
Os01t0739700-01	Rice	plasma membrane	80.94	87.02
EES01451	Sorghum	extracellular, plasma membrane, vacuole	80.0	85.31
Zm00001d043524_P001	Maize	plasma membrane	79.62	85.08
HORVU3Hr1G070440.12	Barley	plastid	83.4	85.0
GSMUA_Achr4P02650_001	Banana	extracellular, vacuole	60.19	74.01
KRH41480	Soybean	extracellular, plasma membrane, vacuole	64.72	68.88
VIT_11s0016g02960.t01	Wine grape	extracellular, vacuole	64.15	68.83
KRH60198	Soybean	extracellular, plasma membrane, vacuole	64.15	68.14
PGSC0003DMT400000943	Potato	extracellular, vacuole	63.4	67.74
Solyc12g008580.1.1	Tomato	extracellular	63.4	67.74
CDY64970	Canola	extracellular, plasma membrane, vacuole	60.94	64.21
Bra002805.1-P	Field mustard	nucleus, plastid, vacuole	59.43	64.02
CDY32869	Canola	endoplasmic reticulum, extracellular, plasma membrane	60.75	64.02
AT5G56590.1	Thale cress	extracellular, plasma membrane, vacuole	60.75	63.64
TraesCS6D01G305000.1	Wheat	extracellular	35.09	38.83
TraesCS2D01G436800.1	Wheat	vacuole	28.68	38.58
TraesCS4D01G241900.1	Wheat	extracellular	36.23	38.4
TraesCS7D01G329400.1	Wheat	endoplasmic reticulum, extracellular	28.11	36.79
TraesCS3D01G366700.2	Wheat	endoplasmic reticulum, vacuole	27.92	36.54
TraesCS2D01G292500.1	Wheat	extracellular, plasma membrane, vacuole	26.79	36.41
TraesCS2D01G201000.1	Wheat	extracellular, plasma membrane, vacuole	33.77	36.31
TraesCS4D01G136800.1	Wheat	cytosol, extracellular, plastid, vacuole	30.75	36.3
TraesCS4D01G018300.1	Wheat	plasma membrane, vacuole	31.89	35.88
TraesCS4D01G225700.1	Wheat	vacuole	28.11	35.65
TraesCS1D01G275700.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	27.17	35.38
TraesCS1D01G056500.1	Wheat	extracellular, vacuole	26.98	35.31
TraesCS2D01G230900.1	Wheat	plasma membrane	34.91	34.77
TraesCS7D01G065400.1	Wheat	extracellular, vacuole	27.74	34.27
TraesCS5D01G160700.1	Wheat	plasma membrane	33.4	33.84
TraesCS5D01G335600.1	Wheat	vacuole	24.91	33.59
TraesCS3D01G249500.1	Wheat	vacuole	27.17	33.49
TraesCS7D01G374900.1	Wheat	plastid, vacuole	27.17	32.58
TraesCS7D01G257600.1	Wheat	extracellular, vacuole	28.87	32.55
TraesCS4D01G235000.1	Wheat	plasma membrane, vacuole	26.79	32.42
TraesCS1D01G430700.1	Wheat	extracellular, vacuole	33.77	31.79
TraesCS4D01G053700.1	Wheat	vacuole	25.28	31.68
TraesCS2D01G221800.1	Wheat	extracellular, vacuole	32.64	31.45
TraesCS1D01G431300.1	Wheat	vacuole	33.96	31.36
TraesCS6D01G148900.1	Wheat	plastid	25.85	30.93
TraesCS1D01G431200.1	Wheat	extracellular, vacuole	32.08	30.47
TraesCS5D01G400400.1	Wheat	extracellular	27.92	29.96
TraesCS5D01G335500.1	Wheat	golgi, plasma membrane, vacuole	26.04	29.24
TraesCS2D01G200900.1	Wheat	plastid	0.75	2.08

Protein Annotations

EnsemblPlants:TraesCS3D01G277300.4	EnsemblPlantsGene:TraesCS3D01G277300	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF
InterPro:X8	KEGG:00500+3.2.1.39	PANTHER:PTHR32227	PANTHER:PTHR32227:SF88	PFAM:PF00332	PFAM:PF07983
SEG:seg	SignalP:SignalP-noTM	SMART:SM00768	SUPFAM:SSF51445	MapMan:50.3.2	:

Description

No Description!

Coordinates

chr3D:-:384574985..384577799

Molecular Weight (calculated)

57731.5 Da

IEP (calculated)

6.838

GRAVY (calculated)

-0.044

Length

530 amino acids

Sequence
(BLAST)

001: MARRHAAAVS AFLFLLLVGH CHGGKTGICY GRNADDLPGP DKVAQLIRQQ SIKYVRIYDT NIDVIKAFAN TSVELMVGVP NADLLAFSQY QSNVDTWLKN
101: SILPYYPATI ITYITVGAEI TESPINVSAL VVPAMRNVHA ALKKVGLHKK ITISSTHSLG VLSRSFPPSA GAFNSSYAHF LKPMLEFLVE NQAPFMVDLY
201: PYYAYQNSPS NVSLNYALFS PQSEGVIDPN TGLVYTNMFD AQVDSIFFAL MALNFKTLKI MITETGWPHK GAAKETGATP DNAQTYNTNL IRHVVNDSGT
301: PAKPGEEIDV YIFSLFNENR KPGIESERNW GLFSPDQSSI YSIDWTGRGN VDIMTGGNRS NGTWCVASTN VSETALQNGL NWACGPGNVD CSAIQPSQPC
401: YQPDTLVSHA SYAFNSYYQQ NGATDVACGF GGAGMRTTKD PSYDTCVYMA AGYEKTPRSL FANVMNMPTY WSDQQFALTI VFLLLSYSSK ISTKNSTATP
501: APSGSSSSLF AQSRTLLLPV LPIVIAVGFL

Best Arabidopsis Sequence Match ( AT5G56590.1 )
(BLAST)

001: MARDFKLIFS ISILLLLLDC CYGGKVGVCY GRSADDLPTP SKVVQLIQQH NIKYVRIYDY NSQVLKAFGN TSIELMIGVP NSDLNAFSQS QSNVDTWLKN
101: SVLPYYPTTK ITYITVGAES TDDPHINASS FVVPAMQNVL TALRKVGLSR RIKVSTTLSL GILSRSFPPS AGAFNSSYAY FLRPMLEFLA ENKSPFMIDL
201: YPYYAYRDSP NNVSLDYVLF ESSSEVIDPN TGLLYKNMFD AQVDALYYAL TALNFRTIKI MVTETGWPTK GSPKEKAAAS SDNAETYNSN IIRHVVTNQG
301: TPAKPGEAMN VYIFSLFNEN RKAGLDSERN WGLFYPDQTS VYQLDFTGKS NGFHSNSSGT NSSGSSNSWC IASSKASERD LKGALDWACG PGNVDCTAIQ
401: PSQPCFQPDT LVSHASFVFN SYFQQNRATD VACSFGGAGV KVNKDPSYDK CIYITAGGNK TKATNATALT SSASTPRGNE LLQWILKLCL MISLFFSLQT
501: MNSQAL

Arabidopsis Description

Glucan endo-1,3-beta-glucosidase 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJU9]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.