Factsheet for TraesCS7D01G374900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, vacuole

Predictor Summary:

plastid 2
mitochondrion 3
vacuole 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G279900.1	Wheat	golgi, vacuole	87.1	96.49
TraesCS7A01G378100.1	Wheat	golgi, vacuole	86.88	96.24
HORVU0Hr1G021950.4	Barley	golgi, vacuole	82.58	91.25
EER88625	Sorghum	extracellular, plasma membrane, vacuole	67.65	76.28
Zm00001d046534_P001	Maize	plasma membrane	66.29	74.37
Os06t0607000-01	Rice	plasma membrane	73.76	67.63
GSMUA_AchrUn_...	Banana	cytosol	40.72	60.61
KRH20124	Soybean	golgi, vacuole	49.55	56.44
PGSC0003DMT400079432	Potato	extracellular, vacuole	49.77	56.41
Solyc07g008150.2.1	Tomato	extracellular, vacuole	49.77	56.41
CDY38531	Canola	golgi, vacuole	48.64	56.28
CDX83243	Canola	vacuole	47.96	56.08
GSMUA_Achr7P13110_001	Banana	golgi, vacuole	42.31	55.82
AT2G26600.1	Thale cress	endoplasmic reticulum, golgi, vacuole	48.87	55.67
Bra000536.1-P	Field mustard	golgi, plasma membrane, vacuole	47.51	55.56
VIT_11s0016g05560.t01	Wine grape	golgi, vacuole	48.64	54.57
TraesCS6D01G148900.1	Wheat	plastid	52.94	52.82
KRH03678	Soybean	golgi, mitochondrion, plasma membrane, plastid, vacuole	48.64	51.44
TraesCS3D01G366700.2	Wheat	endoplasmic reticulum, vacuole	36.43	39.75
TraesCS2D01G292500.1	Wheat	extracellular, plasma membrane, vacuole	34.62	39.23
TraesCS1D01G275700.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	35.97	39.07
TraesCS7D01G329400.1	Wheat	endoplasmic reticulum, extracellular	33.71	36.79
TraesCS4D01G225700.1	Wheat	vacuole	33.71	35.65
TraesCS3D01G249500.1	Wheat	vacuole	34.39	35.35
GSMUA_Achr5P05970_001	Banana	plasma membrane, plastid, vacuole	40.5	34.89
TraesCS1D01G056500.1	Wheat	extracellular, vacuole	31.67	34.57
TraesCS4D01G053700.1	Wheat	vacuole	32.81	34.28
TraesCS7D01G065400.1	Wheat	extracellular, vacuole	31.9	32.87
TraesCS6D01G305000.1	Wheat	extracellular	34.39	31.73
TraesCS5D01G335600.1	Wheat	vacuole	27.38	30.79
TraesCS4D01G235000.1	Wheat	plasma membrane, vacuole	30.09	30.37
TraesCS4D01G018300.1	Wheat	plasma membrane, vacuole	31.22	29.3
TraesCS4D01G136800.1	Wheat	cytosol, extracellular, plastid, vacuole	28.51	28.06
TraesCS7D01G257600.1	Wheat	extracellular, vacuole	29.41	27.66
TraesCS2D01G436800.1	Wheat	vacuole	24.43	27.41
TraesCS3D01G277300.4	Wheat	vacuole	32.58	27.17
TraesCS5D01G400400.1	Wheat	extracellular	29.41	26.32
TraesCS5D01G335500.1	Wheat	golgi, plasma membrane, vacuole	27.15	25.42
TraesCS2D01G201000.1	Wheat	extracellular, plasma membrane, vacuole	27.6	24.75
TraesCS2D01G221800.1	Wheat	extracellular, vacuole	30.32	24.36
TraesCS1D01G430700.1	Wheat	extracellular, vacuole	30.54	23.98
TraesCS4D01G241900.1	Wheat	extracellular	26.92	23.8
TraesCS1D01G431300.1	Wheat	vacuole	30.54	23.52
TraesCS1D01G431200.1	Wheat	extracellular, vacuole	28.51	22.58
TraesCS5D01G160700.1	Wheat	plasma membrane	26.24	22.18
TraesCS2D01G230900.1	Wheat	plasma membrane	26.47	21.99
TraesCS2D01G200900.1	Wheat	plastid	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS7D01G374900.1	EnsemblPlantsGene:TraesCS7D01G374900	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF
KEGG:00500+3.2.1.39	PANTHER:PTHR32227	PANTHER:PTHR32227:SF47	PFAM:PF00332	SEG:seg	SUPFAM:SSF51445
TMHMM:TMhelix	MapMan:50.3.2	:	:	:	:

Description

No Description!

Coordinates

chr7D:+:485095762..485098630

Molecular Weight (calculated)

48401.2 Da

IEP (calculated)

8.359

GRAVY (calculated)

-0.069

Length

442 amino acids

Sequence
(BLAST)

001: MPRPGTKLPS TARLACPSDA ACHSGARLLL RSCSGSANCG GPAMTVVMGR RRCAHWMLLL FCCLLLTSPS HGHRHNRPAD AFVGGYGINY GRIANNLPSP
101: DKVVELLRRS KIRNVKIYNE DHTVLDAFKG TGLNLVIAVH NGLLNAFAAN ESVAIDWLNE NVQPYISQTR IVGITVGNEV LGGDPSLAAP LVGAVKNMYD
201: GLKKLHLDDK IELFTPHSEA VFATSYPPSA CVFKEEIMVY MKPLLDLFSR IGSPFYVNAY PFLAYLTDPG QIDINYALFQ PNPGVVDPNT SLHYDNMFDA
301: QIDAAYAALQ AAGYNDMEVR VAETGWASSG DQNQAGPSVE NARTYNYNLR KRLFLRKGTP LKPKIPVKAY IFALFNENLK NGDPTEKHYG LFNPDGRISY
401: DIGYSGLLPS SAPASLLSIK EMRAWGWIAH YSAAVILAIF LS

Best Arabidopsis Sequence Match ( AT2G26600.1 )
(BLAST)

001: MRSSKLLLLK FFFFFFFNLT SLEYQVDGAF VGTYGINYGR IADNIPSPEK VVLLLKQAKI RNVRIYDVDH TVLEAFSGTG LDLVVGLPNG FLKEMSSNAD
101: HAFSWVKENI QSFLPKTRIR GIAIGNEVLG GGDSELAGAL LGAAKNVYNA LKKMNLEDTV QITTAHSQAV FSDSYPPSSC VFKENVVQFM KPLLEFFQQI
201: GSPFCLNAYP FLAYTYNPKE IDINYALFKP TEGIYDPKTD LHYDNMLDAQ IDAAYMALQD AGFKKMEVMI TETGWASKGD SDEPAATPEN ARTYNYNLRK
301: RLAKKKGTPL RPKTVLKAYI FALFNENSKP GKSSETHFGL FKPDGTISYD IGFNNLKSDS PKSLISSSKS ARYYVALVIS VSAFLLMI

Arabidopsis Description

Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:O48727]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.