Factsheet for GSMUA_Achr5P05970_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, vacuole

Predictor Summary:

plastid 2
vacuole 1
plasma membrane 2
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	40.55	70.03
GSMUA_Achr7P13110_001	Banana	golgi, vacuole	41.72	63.88
VIT_11s0016g05560.t01	Wine grape	golgi, vacuole	37.04	48.22
KRH20124	Soybean	golgi, vacuole	35.67	47.16
EER88625	Sorghum	extracellular, plasma membrane, vacuole	35.87	46.94
PGSC0003DMT400079432	Potato	extracellular, vacuole	35.67	46.92
Solyc07g008150.2.1	Tomato	extracellular, vacuole	35.09	46.15
CDX83243	Canola	vacuole	33.92	46.03
Zm00001d046534_P001	Maize	plasma membrane	35.28	45.94
CDY38531	Canola	golgi, vacuole	34.11	45.81
Bra000536.1-P	Field mustard	golgi, plasma membrane, vacuole	33.72	45.77
AT2G26600.1	Thale cress	endoplasmic reticulum, golgi, vacuole	34.31	45.36
TraesCS7A01G378100.1	Wheat	golgi, vacuole	34.31	44.11
KRH03678	Soybean	golgi, mitochondrion, plasma membrane, plastid, vacuole	35.87	44.02
TraesCS7B01G279900.1	Wheat	golgi, vacuole	33.72	43.36
HORVU0Hr1G021950.4	Barley	golgi, vacuole	33.72	43.25
Os06t0607000-01	Rice	plasma membrane	38.99	41.49
TraesCS7D01G374900.1	Wheat	plastid, vacuole	34.89	40.5
GSMUA_Achr6P13230_001	Banana	vacuole	20.08	30.65
GSMUA_Achr11P...	Banana	vacuole	22.61	30.13
GSMUA_Achr11P...	Banana	extracellular, plasma membrane, vacuole	21.25	27.53
GSMUA_Achr8P22560_001	Banana	extracellular, vacuole	22.22	27.08
GSMUA_Achr7P08120_001	Banana	plastid	16.18	25.78
GSMUA_Achr7P26810_001	Banana	plastid	14.04	24.32
GSMUA_Achr6P31650_001	Banana	extracellular, vacuole	21.25	23.75
GSMUA_Achr9P16150_001	Banana	cytosol, extracellular, plastid, vacuole	18.71	23.47
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular, vacuole	20.86	23.16
GSMUA_Achr8P08800_001	Banana	peroxisome, plastid, vacuole	17.15	22.62
GSMUA_Achr4P27760_001	Banana	cytosol, extracellular, vacuole	10.53	21.95
GSMUA_Achr10P...	Banana	mitochondrion	15.79	21.66
GSMUA_Achr11P...	Banana	plasma membrane, vacuole	16.76	21.18
GSMUA_Achr11P...	Banana	extracellular, plasma membrane, vacuole	21.05	20.81
GSMUA_Achr11P...	Banana	extracellular	17.74	20.73
GSMUA_Achr6P05040_001	Banana	extracellular, vacuole	17.35	20.7
GSMUA_AchrUn_...	Banana	extracellular, vacuole	17.93	20.26
GSMUA_Achr2P17770_001	Banana	plasma membrane, vacuole	15.59	20.1
GSMUA_Achr4P33420_001	Banana	vacuole	19.69	19.69
GSMUA_Achr2P13900_001	Banana	cytosol	18.52	19.11
GSMUA_Achr8P15370_001	Banana	extracellular, plasma membrane, vacuole	19.1	18.88
GSMUA_Achr3P30520_001	Banana	cytosol, plastid, vacuole	16.76	18.82
GSMUA_Achr6P29690_001	Banana	extracellular, plasma membrane, vacuole	19.1	18.7
GSMUA_Achr3P14330_001	Banana	cytosol, plasma membrane, vacuole	18.32	18.61
GSMUA_Achr4P02650_001	Banana	extracellular, vacuole	14.43	17.17
GSMUA_Achr2P21600_001	Banana	mitochondrion, nucleus, plasma membrane	22.81	17.01

Protein Annotations

KEGG:00500+3.2.1.39	Gene3D:3.20.20.80	MapMan:50.3.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005575	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr5G05970_001	EnsemblPlants:GSMUA_Achr5P05970_001	EnsemblPlants:GSMUA_Achr5T05970_001	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF
UniProt:M0SW26	PFAM:PF00332	PANTHER:PTHR32227	PANTHER:PTHR32227:SF47	SUPFAM:SSF51445	TMHMM:TMhelix
UniParc:UPI000295E159	SEG:seg	:	:	:	:

Description

Putative Glucan endo-1,3-beta-glucosidase 14 [Source:GMGC_GENE;Acc:GSMUA_Achr5G05970_001]

Coordinates

chr5:-:4443251..4451046

Molecular Weight (calculated)

56707.0 Da

IEP (calculated)

10.091

GRAVY (calculated)

0.118

Length

513 amino acids

Sequence
(BLAST)

001: MRGLLIHIDS AGTRWVHFVL SCHGPGDRLK AKEGVVEVST VAVGTRSFQF FSRNASFSQS SQYSPLLALR SAQDRVSVRQ GKATDLVIAS LVLRWKQVDV
101: ARLKESIPWD GPLPSSSSIL RCFSWFLAFL RAGGVVVVAV TAVRKEAKIL VYGMPPHKAS TIFPLSLHRV SSATASALAV LIGIAVSLVR PPPLLVKKKR
201: MRDFRLLYFF CCLLCFCFPH HGPVKVQAFT GTFGINYGRI ADNIPPPESV VTLLKAAKIK NVRIYDADHN VLNAFRGSGL DLVVSVSNDH LKDMKILLGA
301: IKSVYNALKR LQLADDIMVS TPHSQAVFVN SFPPSSCTFK EDTNLHYDNM FDAQIDAAYA ALEAAGFDKM EVRVSETGWA SSGDENELGA TTHNARTYNY
401: NLRKRLFKKK GTPLRPKIVV KAYLFALFNE NQKPGASSEK HYGLFKADGS ISYDIGFTGL KPSCASPSLL SLKDIHMQSW LAPYSMIITC FIALQFHNPF
501: QTTFFVITLI VFT

Best Arabidopsis Sequence Match ( AT2G26600.1 )
(BLAST)

001: MRSSKLLLLK FFFFFFFNLT SLEYQVDGAF VGTYGINYGR IADNIPSPEK VVLLLKQAKI RNVRIYDVDH TVLEAFSGTG LDLVVGLPNG FLKEMSSNAD
101: HAFSWVKENI QSFLPKTRIR GIAIGNEVLG GGDSELAGAL LGAAKNVYNA LKKMNLEDTV QITTAHSQAV FSDSYPPSSC VFKENVVQFM KPLLEFFQQI
201: GSPFCLNAYP FLAYTYNPKE IDINYALFKP TEGIYDPKTD LHYDNMLDAQ IDAAYMALQD AGFKKMEVMI TETGWASKGD SDEPAATPEN ARTYNYNLRK
301: RLAKKKGTPL RPKTVLKAYI FALFNENSKP GKSSETHFGL FKPDGTISYD IGFNNLKSDS PKSLISSSKS ARYYVALVIS VSAFLLMI

Arabidopsis Description

Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:O48727]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.