Skip to main content
crop-pal logo
Sorghum
Search for another protein from :
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, plasma membrane, vacuole

Predictor Summary:
  • extracellular 7
  • golgi 5
  • plasma membrane 6
  • endoplasmic reticulum 5
  • vacuole 7
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:extracellular, vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d046534_P001 Maize plasma membrane 93.62 93.15
TraesCS7A01G378100.1 Wheat golgi, vacuole 76.02 74.69
TraesCS7B01G279900.1 Wheat golgi, vacuole 75.77 74.44
HORVU0Hr1G021950.4 Barley golgi, vacuole 73.98 72.5
TraesCS7D01G374900.1 Wheat plastid, vacuole 76.28 67.65
Os06t0607000-01 Rice plasma membrane 82.91 67.43
GSMUA_AchrUn_... Banana cytosol 48.98 64.65
KXG29738 Sorghum golgi, mitochondrion, vacuole 68.88 64.29
KRH20124 Soybean golgi, vacuole 58.93 59.54
GSMUA_Achr7P13110_001 Banana golgi, vacuole 50.51 59.1
CDY38531 Canola golgi, vacuole 56.12 57.59
CDX83243 Canola vacuole 55.36 57.41
PGSC0003DMT400079432 Potato extracellular, vacuole 56.89 57.18
Bra000536.1-P Field mustard golgi, plasma membrane, vacuole 55.1 57.14
AT2G26600.1 Thale cress endoplasmic reticulum, golgi, vacuole 56.12 56.7
Solyc07g008150.2.1 Tomato extracellular, vacuole 56.38 56.67
VIT_11s0016g05560.t01 Wine grape golgi, vacuole 56.63 56.35
KRH03678 Soybean golgi, mitochondrion, plasma membrane, plastid, vacuole 58.16 54.55
EES18301 Sorghum golgi, plasma membrane, vacuole 42.35 40.49
EES01795 Sorghum extracellular, plasma membrane, vacuole 42.09 40.44
EES10741 Sorghum golgi, plasma membrane, vacuole 41.07 39.27
EER88444 Sorghum extracellular, vacuole 39.29 37.75
EES05179 Sorghum plastid 39.03 37.41
GSMUA_Achr5P05970_001 Banana plasma membrane, plastid, vacuole 46.94 35.87
KXG38664 Sorghum extracellular, vacuole 37.76 34.1
KXG19201 Sorghum plastid 39.8 33.62
EES07606 Sorghum extracellular, vacuole 41.58 33.2
EER93548 Sorghum vacuole 35.71 31.46
EER95211 Sorghum extracellular, vacuole 34.18 31.02
KXG37872 Sorghum endoplasmic reticulum, extracellular, vacuole 35.71 29.47
EES01451 Sorghum extracellular, plasma membrane, vacuole 36.22 28.57
EES14212 Sorghum extracellular 35.2 28.51
EES13119 Sorghum extracellular, vacuole 33.16 28.02
EER99488 Sorghum extracellular, vacuole 35.71 28.0
EER90524 Sorghum extracellular 33.42 27.12
EES10308 Sorghum endoplasmic reticulum, extracellular, vacuole 32.14 26.98
EER99139 Sorghum endoplasmic reticulum, plasma membrane 33.16 26.92
EER95256 Sorghum extracellular, plasma membrane, vacuole 33.16 25.9
OQU90151 Sorghum vacuole 31.63 25.1
EER99489 Sorghum extracellular, vacuole 36.99 24.96
KXG34744 Sorghum vacuole 31.89 24.7
KXG36404 Sorghum vacuole 34.95 24.16
KXG36295 Sorghum plasma membrane 30.61 22.18
EER99491 Sorghum extracellular, vacuole 34.69 20.57
OQU92921 Sorghum mitochondrion 39.03 13.99
Protein Annotations
KEGG:00500+3.2.1.39Gene3D:3.20.20.80MapMan:50.3.2EntrezGene:8082268UniProt:C5Z5P7EnsemblPlants:EER88625
ProteinID:EER88625ProteinID:EER88625.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005488
GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0005975GO:GO:0008150GO:GO:0008152
GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0030246GO:GO:0030247GO:GO:0046658
InterPro:Glyco_hydro_17InterPro:Glycoside_hydrolase_SFProteinID:KXG20326.1PFAM:PF00332PANTHER:PTHR32227PANTHER:PTHR32227:SF47
EnsemblPlantsGene:SORBI_3010G186700SUPFAM:SSF51445unigene:Sbi.4308SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0001A893F9
RefSeq:XP_002437258.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr10:+:52729202..52733538
Molecular Weight (calculated)
43403.5 Da
IEP (calculated)
7.214
GRAVY (calculated)
0.042
Length
392 amino acids
Sequence
(BLAST)
001: MMVPRTVLLL CCCLLAFLPL GPLAVEAFVG GYGINYGRIA NNIPSPDKVV ELLRRAKIRN VKIYDADHSV LDAFKGSGIN LVIAIPNELV KDMAANTSRS
101: MDWLNQNVQP YLPQTRIVGI TVGNEVLGGQ DQSLYQPLVD AVKNVYDGLK RLHLESKIEL FTPHSEAVFA TSYPPSACVF KEELMAYMKP LLDFFAMIGS
201: PFYVNAYPFL AYISDPEHID INYALFKPNK GIVDPNTSLH YDNMFDAQID AAYAALHAAG YDDMEVRVAE TGWASSGDQN EAGASSENAR TYNFNLRKRL
301: FLRTGTPLKP KRPVKAYIFA LFNENQKPGA GSERHYGLFL PDGRISYDIG VSGLLPSSAS SSMLFIKKVR AGGWILHYWA TVLLCIFILL GP
Best Arabidopsis Sequence Match ( AT2G26600.1 )
(BLAST)
001: MRSSKLLLLK FFFFFFFNLT SLEYQVDGAF VGTYGINYGR IADNIPSPEK VVLLLKQAKI RNVRIYDVDH TVLEAFSGTG LDLVVGLPNG FLKEMSSNAD
101: HAFSWVKENI QSFLPKTRIR GIAIGNEVLG GGDSELAGAL LGAAKNVYNA LKKMNLEDTV QITTAHSQAV FSDSYPPSSC VFKENVVQFM KPLLEFFQQI
201: GSPFCLNAYP FLAYTYNPKE IDINYALFKP TEGIYDPKTD LHYDNMLDAQ IDAAYMALQD AGFKKMEVMI TETGWASKGD SDEPAATPEN ARTYNYNLRK
301: RLAKKKGTPL RPKTVLKAYI FALFNENSKP GKSSETHFGL FKPDGTISYD IGFNNLKSDS PKSLISSSKS ARYYVALVIS VSAFLLMI
Arabidopsis Description
Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:O48727]
SUBAcon: [golgi,endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.