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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 6
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d018214_P001 Maize extracellular 90.43 90.98
Os02t0771700-01 Rice extracellular 84.73 85.25
TraesCS6D01G305000.1 Wheat extracellular 79.84 81.84
TraesCS6B01G355600.1 Wheat vacuole 79.43 81.59
TraesCS6A01G325300.1 Wheat cytosol, extracellular, vacuole 76.78 81.08
GSMUA_Achr8P22560_001 Banana extracellular, vacuole 60.29 70.31
GSMUA_Achr9P16150_001 Banana cytosol, extracellular, plastid, vacuole 58.45 70.17
CDY06601 Canola endoplasmic reticulum, extracellular 56.21 61.47
CDY20780 Canola extracellular, vacuole 56.01 61.25
HORVU6Hr1G079630.2 Barley mitochondrion, plastid, vacuole 67.41 61.18
VIT_12s0059g01320.t01 Wine grape extracellular, vacuole 58.25 60.72
CDY46679 Canola extracellular, vacuole 54.58 60.09
Bra035561.1-P Field mustard extracellular, vacuole 56.21 60.0
CDY17308 Canola extracellular, vacuole 54.79 59.91
CDY36734 Canola extracellular, vacuole 55.8 59.57
CDY56498 Canola extracellular, vacuole 53.56 59.5
CDX92794 Canola endoplasmic reticulum, extracellular 54.58 59.42
CDY12009 Canola extracellular, vacuole 55.6 59.35
KRH14333 Soybean endoplasmic reticulum, extracellular 55.6 59.22
CDY18049 Canola extracellular, vacuole 52.95 58.82
CDY19908 Canola extracellular, vacuole 54.58 58.39
VIT_19s0090g01070.t01 Wine grape extracellular, plasma membrane, vacuole 56.01 58.39
KRH73361 Soybean extracellular, vacuole 56.01 58.26
KRH73795 Soybean extracellular, vacuole 56.01 58.26
Solyc07g049370.2.1 Tomato extracellular, vacuole 55.19 57.91
KRH14776 Soybean extracellular, vacuole 56.01 57.65
PGSC0003DMT400001833 Potato extracellular, vacuole 54.79 57.48
Bra002927.1-P Field mustard extracellular, vacuole 54.18 57.45
AT5G55180.2 Thale cress endoplasmic reticulum, extracellular 54.38 57.42
AT2G05790.1 Thale cress extracellular, vacuole 55.19 57.42
Bra015166.1-P Field mustard extracellular, vacuole 55.19 57.29
PGSC0003DMT400033482 Potato extracellular, vacuole 55.19 57.17
AT4G26830.2 Thale cress endoplasmic reticulum, extracellular 52.95 56.64
Solyc12g014420.1.1 Tomato extracellular 54.79 56.04
Bra019084.1-P Field mustard endoplasmic reticulum, extracellular 54.58 54.36
PGSC0003DMT400033484 Potato extracellular, vacuole 43.99 54.14
EER99488 Sorghum extracellular, vacuole 53.97 53.0
Bra028988.1-P Field mustard extracellular, vacuole 54.99 46.96
EER99489 Sorghum extracellular, vacuole 54.99 46.47
EES01795 Sorghum extracellular, plasma membrane, vacuole 38.09 45.83
KXG36404 Sorghum vacuole 52.34 45.33
EES14212 Sorghum extracellular 42.97 43.59
EER99491 Sorghum extracellular, vacuole 58.66 43.57
EES18301 Sorghum golgi, plasma membrane, vacuole 35.85 42.93
EER88444 Sorghum extracellular, vacuole 35.64 42.89
EER88625 Sorghum extracellular, plasma membrane, vacuole 33.2 41.58
EES13119 Sorghum extracellular, vacuole 38.9 41.16
KXG37872 Sorghum endoplasmic reticulum, extracellular, vacuole 39.51 40.84
EES10741 Sorghum golgi, plasma membrane, vacuole 34.01 40.73
EER99139 Sorghum endoplasmic reticulum, plasma membrane 39.51 40.17
EES05179 Sorghum plastid 33.4 40.1
KXG38664 Sorghum extracellular, vacuole 35.44 40.09
EES10308 Sorghum endoplasmic reticulum, extracellular, vacuole 36.86 38.76
KXG29738 Sorghum golgi, mitochondrion, vacuole 32.99 38.57
EES01451 Sorghum extracellular, plasma membrane, vacuole 38.7 38.23
EER90524 Sorghum extracellular 37.47 38.1
KXG19201 Sorghum plastid 35.85 37.93
EER95256 Sorghum extracellular, plasma membrane, vacuole 38.09 37.25
OQU90151 Sorghum vacuole 35.44 35.22
EER95211 Sorghum extracellular, vacuole 29.74 33.8
EER93548 Sorghum vacuole 30.14 33.26
KXG36295 Sorghum plasma membrane 36.25 32.9
KXG34744 Sorghum vacuole 32.18 31.23
OQU92921 Sorghum mitochondrion 35.85 16.09
Protein Annotations
KEGG:00500+3.2.1.39Gene3D:3.20.20.80MapMan:50.3.2EntrezGene:8075213UniProt:C5XTH4EnsemblPlants:EES07606
ProteinID:EES07606ProteinID:EES07606.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005488
GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0005975GO:GO:0008150GO:GO:0008152
GO:GO:0016020GO:GO:0016787GO:GO:0016798GO:GO:0030246GO:GO:0030247GO:GO:0046658
InterPro:Glyco_hydro_17InterPro:Glycoside_hydrolase_SFPFAM:PF00332PFAM:PF07983ScanProsite:PS00587PANTHER:PTHR32227
PANTHER:PTHR32227:SF102SMART:SM00768EnsemblPlantsGene:SORBI_3004G313200SUPFAM:SSF51445unigene:Sbi.19692SignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI0001A861AAInterPro:X8RefSeq:XP_002454630.1SEG:seg:
Description
hypothetical protein
Coordinates
chr4:-:64995627..64999361
Molecular Weight (calculated)
50923.2 Da
IEP (calculated)
8.001
GRAVY (calculated)
0.033
Length
491 amino acids
Sequence
(BLAST)
001: MASLRRLPVA VLLAVAVPLL FLCPAEAGTV GVNYGRVANN LPNPAAVVQL LKQQGVGQVK LYDADPTVLR ALANTGIKVV VALPNEQLAA AASRASYALL
101: WVRRNVAAYY PATQIHGIAV GNEVFASAKN VTAQLVPAMT NVHAALARLG LDNAVKVSSP IALTALASSY PSSAGAFRED LAQAVMKPML DFLAQTGSYL
201: MVNAYPFFAY SGNAGDISLD YALFRPNAGV LDAGNGLKYY SLLDAQLDAV FAAVSKLGNY NAVRVVVSET GWPSKGDANE AGASAANAAA YNGNLARRVL
301: SGNAGTPRRP DADIDVYLFA LFNENQKPGP TSERNYGVFY PNQQKVYDVD FVLGGGGNPS GGGSQGNNGL GWQENGGPSS GSGSTSTSGN PPSGVKVTTG
401: EAWCVANAIV GEQRLQAALD YACGPGGADC KAIQPGAACF EPNTMVAHAS YAFNDYYQRK GRSIGTCDFA GAAYVVNQAP KMGKCDLPST V
Best Arabidopsis Sequence Match ( AT2G05790.1 )
(BLAST)
001: MDLLTPLIFL LLLLSPFSLS DAGSIGVNYG RISDELPSAF KVVQLLKSQG ITRVKIFDAD PSVLKALSGS GIKVTVDLPN ELLFSAAKRT SFAVSWVKRN
101: VAAYHPSTQI ESIAVGNEVF VDTHNTTSFL IPAMRNIHKA LMSFNLHSDI KISSPLALSA LQNSYPSSSG SFRPELIDSV IKPMLDFLRE TGSRLMINVY
201: PFFAYEGNSD VIPLDYALLR ENPGMVDSGN GLRYFNLFDA QIDAVFAAMS ALKYDDIEII VTETGWPSKG DENEVGATLA NAASYNGNLI RRILTRGGTP
301: LRPKADLTVY LFALFNENKK LGPTSERNYG LFFPDEKKVY DIPFTTEGLK HYRDGGHTPV TGGDQVTKPP MSGGVSKSLN GYTWCVANGD AGEERLQGGL
401: DYACGEGGAD CRPIQPGANC YSPDTLEAHA SFAFNSYYQK KGRAGGSCYF GGAAYVVSQP PKYGRCEFPT GY
Arabidopsis Description
O-Glycosyl hydrolases family 17 protein [Source:UniProtKB/TrEMBL;Acc:F4IHD3]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.