CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 5
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d036051_P001	Maize	extracellular, vacuole	81.03	88.26
TraesCS7A01G069700.1	Wheat	extracellular, vacuole	71.98	77.86
TraesCSU01G153100.1	Wheat	extracellular, vacuole	71.55	77.39
TraesCS7D01G065400.1	Wheat	extracellular, vacuole	71.55	77.39
Os06t0131500-01	Rice	plastid	74.57	77.06
HORVU7Hr1G012550.1	Barley	vacuole	70.47	73.15
TraesCS1A01G046000.1	Wheat	extracellular, vacuole	46.77	59.78
KXG38664	Sorghum	extracellular, vacuole	48.92	52.3
EES10741	Sorghum	golgi, plasma membrane, vacuole	41.38	46.83
EES05179	Sorghum	plastid	40.73	46.21
EES18301	Sorghum	golgi, plasma membrane, vacuole	39.66	44.88
EES01795	Sorghum	extracellular, plasma membrane, vacuole	39.44	44.85
KRH34248	Soybean	extracellular, plasma membrane, vacuole	39.87	44.69
VIT_02s0025g02770.t01	Wine grape	extracellular	38.79	44.44
PGSC0003DMT400012898	Potato	cytosol	39.22	44.28
Solyc12g055840.1.1	Tomato	nucleus	39.87	43.84
PGSC0003DMT400031570	Potato	extracellular, vacuole	39.01	43.51
EER88444	Sorghum	extracellular, vacuole	37.72	42.89
Solyc08g083310.2.1	Tomato	nucleus	39.01	42.79
CDX93815	Canola	extracellular	37.5	42.03
Bra023293.1-P	Field mustard	extracellular	37.5	42.03
CDY69080	Canola	extracellular	37.28	41.39
AT5G42100.1	Thale cress	extracellular, vacuole	36.85	40.24
CDY13362	Canola	extracellular, vacuole	35.78	40.1
EER88625	Sorghum	extracellular, plasma membrane, vacuole	33.62	39.8
AT1G32860.1	Thale cress	extracellular, plasma membrane, vacuole	36.21	39.44
CDX67530	Canola	extracellular	35.99	39.11
Bra028526.1-P	Field mustard	extracellular, vacuole	35.99	38.84
KXG29738	Sorghum	golgi, mitochondrion, vacuole	33.41	36.9
KXG37872	Sorghum	endoplasmic reticulum, extracellular, vacuole	37.28	36.42
EES07606	Sorghum	extracellular, vacuole	37.93	35.85
EER95211	Sorghum	extracellular, vacuole	33.19	35.65
EES14212	Sorghum	extracellular	37.07	35.54
EER93548	Sorghum	vacuole	34.05	35.51
EES13119	Sorghum	extracellular, vacuole	35.34	35.34
EER90524	Sorghum	extracellular	36.64	35.2
EES10308	Sorghum	endoplasmic reticulum, extracellular, vacuole	33.41	33.19
EER99139	Sorghum	endoplasmic reticulum, plasma membrane	32.54	31.26
EER99488	Sorghum	extracellular, vacuole	32.97	30.6
EES01451	Sorghum	extracellular, plasma membrane, vacuole	32.76	30.58
EER95256	Sorghum	extracellular, plasma membrane, vacuole	32.11	29.68
KXG36295	Sorghum	plasma membrane	34.05	29.21
OQU90151	Sorghum	vacuole	29.74	27.94
KXG34744	Sorghum	vacuole	30.17	27.67
EER99489	Sorghum	extracellular, vacuole	32.76	26.16
KXG36404	Sorghum	vacuole	31.47	25.75
EER99491	Sorghum	extracellular, vacuole	32.33	22.69
OQU92921	Sorghum	mitochondrion	46.34	19.65

Protein Annotations

KEGG:00500+3.2.1.39	Gene3D:3.20.20.80	MapMan:50.3.2	UniProt:A0A194YHW9	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016787	GO:GO:0030246	GO:GO:0030247
GO:GO:0042973	GO:GO:0046658	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	EnsemblPlants:KXG19201	ProteinID:KXG19201
ProteinID:KXG19201.1	PFAM:PF00332	PANTHER:PTHR32227	PANTHER:PTHR32227:SF141	EnsemblPlantsGene:SORBI_3010G022500	SUPFAM:SSF51445
UniParc:UPI0007F27074	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:1853938..1856327

Molecular Weight (calculated)

47776.4 Da

IEP (calculated)

8.904

GRAVY (calculated)

0.101

Length

464 amino acids

Sequence
(BLAST)

001: MHAFICLPSP KMPRKPSSCS SAPTPTPLPI VPAMALHLML AAAAAFAVLA PPAASSGPTP APPALGINYG QVADNLPPPQ AALLLLRALN ATRVKLYDAD
101: ARVLRAFAGS GVDFTVGVPD RLVPRMATDP SAAASWVRSN LLPHLPATSI TAVTVGNEVL SGTNAAMLRS LLPAMESLHA ALAACNLTSR VSVTTAHSLA
201: VLSSSFPPSS AAFRREVVPY MAPLLGFLAR TGAPFLVNAY PYFAYKADPD RVDLGYALFE ANSAGVADAA TGLRYDNMLH AMVDAARAAI CRANYGKALE
301: IRVSETGWPS QGDDDEAGAT PENAARYNGN LMRLVAQGKG TPAAPGEPLQ VYVFALFNED QKPGPASERH YGLFKPDGTP AYDVGVKAPT ITLPKGNGSS
401: GSGNNGTGGL VVAQGPGGAD GVGPGTGYYT VSAAAMNKVK SRRRRCMESL VAAAAVLAMV SGPC

Best Arabidopsis Sequence Match ( AT1G32860.1 )
(BLAST)

001: MELTSFHRSS LLFLISLTLI ILPTTTTSIG VNYGQIGDNL PSPTDVIPLI KSIGATKVKL YDANPQILKA FSNTGIEFII GLGNEYLSKM KDPSKALTWI
101: KQNVTPFLPA TNITCITIGN EILALNDSSL TTNLLPAMQG VHSALITAGL SDQISVTTAH SLSILKSSFP PSAGEFQPDL LDSLTPILEF HRKTDSPFLI
201: NAYPFFAYKG NPKEVPLDFV LFQPNQGIVD PATGFHYDNM LFAQIDAVYS ALAAAGFKSL RVEISETGWP SKGDDDEVGA TPENAKRYNG NLIKMMMSGK
301: KTKTPLKPNN DLSIYVFALF NENLKPGPTS ERNYGLFKPD GTQAYSLGFA LNDVVRGASG GGTGGGNSSS GGGRDKSPVF PVSPVAPDSA STGYLAISAS
401: PVTGKRKGKG AILSLVVSML LARHLL

Arabidopsis Description

Glucan endo-1,3-beta-glucosidase 11 [Source:UniProtKB/Swiss-Prot;Acc:Q8L868]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.