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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 6
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
EpiLoc:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d031571_P001 Maize extracellular 88.84 89.21
Os08t0525800-00 Rice extracellular, mitochondrion, vacuole 70.04 72.75
GSMUA_Achr8P08800_001 Banana peroxisome, plastid, vacuole 52.69 65.55
TraesCS7D01G257600.1 Wheat extracellular, vacuole 63.64 65.53
EER99139 Sorghum endoplasmic reticulum, plasma membrane 63.84 63.98
TraesCS7B01G153600.1 Wheat vacuole 63.64 62.47
GSMUA_Achr11P... Banana extracellular 56.2 61.96
TraesCS7A01G256800.1 Wheat vacuole 63.22 61.94
GSMUA_AchrUn_... Banana extracellular, vacuole 54.55 58.15
EER90524 Sorghum extracellular 54.75 54.87
VIT_05s0062g01430.t01 Wine grape extracellular, vacuole 49.59 51.39
KRH46623 Soybean nucleus 48.76 50.54
CDY67322 Canola extracellular 22.73 49.77
KRG99621 Soybean nucleus 47.93 49.68
CDY24629 Canola vacuole 46.49 48.91
KRH20365 Soybean extracellular, vacuole 39.46 48.85
Solyc12g098560.1.1 Tomato extracellular 46.28 48.8
Bra029639.1-P Field mustard vacuole 46.28 48.7
CDY28063 Canola vacuole 46.28 48.7
PGSC0003DMT400022520 Potato extracellular, vacuole 46.07 48.06
CDY45466 Canola vacuole 45.66 48.04
CDY08004 Canola vacuole 45.45 47.83
Solyc09g057630.2.1 Tomato nucleus 45.66 47.63
AT3G07320.1 Thale cress extracellular, vacuole 45.04 47.39
AT3G23770.1 Thale cress extracellular 46.28 47.06
CDY50110 Canola extracellular, vacuole 46.07 46.85
Bra028343.1-P Field mustard extracellular, vacuole 45.66 46.43
CDY18092 Canola extracellular, vacuole 45.66 46.43
CDY59775 Canola extracellular, vacuole 45.45 46.41
CDY53213 Canola extracellular, vacuole 45.87 46.25
Bra001918.1-P Field mustard extracellular, vacuole 45.87 46.25
Bra014979.1-P Field mustard extracellular, vacuole 45.45 46.03
CDY63754 Canola extracellular, vacuole 45.04 45.61
AT4G14080.1 Thale cress vacuole 45.04 45.61
CDY06469 Canola extracellular 44.42 44.89
Bra037057.1-P Field mustard extracellular, vacuole 44.21 44.68
Bra032758.1-P Field mustard vacuole 44.01 44.38
CDY08310 Canola extracellular, vacuole 43.8 44.26
CDY01191 Canola extracellular, vacuole 43.8 44.17
CDY12732 Canola extracellular, vacuole 43.59 43.96
CDY12371 Canola extracellular, vacuole 43.18 43.63
CDY27122 Canola extracellular, vacuole 42.98 43.42
EES07606 Sorghum extracellular, vacuole 43.59 42.97
Bra038969.1-P Field mustard extracellular, vacuole 42.36 40.59
EES13119 Sorghum extracellular, vacuole 37.4 39.01
EER88444 Sorghum extracellular, vacuole 32.85 38.97
CDX74052 Canola vacuole 44.83 38.27
Bra001245.1-P Field mustard vacuole 44.63 38.16
KXG37872 Sorghum endoplasmic reticulum, extracellular, vacuole 36.78 37.47
KXG19201 Sorghum plastid 35.54 37.07
EES01795 Sorghum extracellular, plasma membrane, vacuole 30.58 36.27
EES18301 Sorghum golgi, plasma membrane, vacuole 30.58 36.1
EES05179 Sorghum plastid 30.37 35.94
EER95211 Sorghum extracellular, vacuole 31.82 35.65
EER99488 Sorghum extracellular, vacuole 36.57 35.4
EER88625 Sorghum extracellular, plasma membrane, vacuole 28.51 35.2
EES01451 Sorghum extracellular, plasma membrane, vacuole 35.74 34.81
EER93548 Sorghum vacuole 31.82 34.61
EES10308 Sorghum endoplasmic reticulum, extracellular, vacuole 33.26 34.48
KXG29738 Sorghum golgi, mitochondrion, vacuole 29.55 34.05
KXG38664 Sorghum extracellular, vacuole 30.37 33.87
EES10741 Sorghum golgi, plasma membrane, vacuole 28.31 33.41
EER95256 Sorghum extracellular, plasma membrane, vacuole 34.5 33.27
KXG36295 Sorghum plasma membrane 34.3 30.68
OQU90151 Sorghum vacuole 31.2 30.57
KXG36404 Sorghum vacuole 35.74 30.51
EER99489 Sorghum extracellular, vacuole 36.16 30.12
KXG34744 Sorghum vacuole 29.34 28.06
EER99491 Sorghum extracellular, vacuole 37.19 27.23
OQU92921 Sorghum mitochondrion 30.37 13.44
Protein Annotations
KEGG:00500+3.2.1.39Gene3D:3.20.20.80MapMan:50.3.2EntrezGene:8060969UniProt:C5YI54EnsemblPlants:EES14212
ProteinID:EES14212ProteinID:EES14212.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005488
GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0005975GO:GO:0008150GO:GO:0008152
GO:GO:0016020GO:GO:0016787GO:GO:0016798GO:GO:0030246GO:GO:0030247GO:GO:0046658
InterPro:Glyco_hydro_17InterPro:Glycoside_hydrolase_SFPFAM:PF00332PFAM:PF07983ScanProsite:PS00587PANTHER:PTHR32227
PANTHER:PTHR32227:SF230SMART:SM00768EnsemblPlantsGene:SORBI_3007G197000SUPFAM:SSF51445SignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI0001A87DB2InterPro:X8RefSeq:XP_002444717.1SEG:seg::
Description
hypothetical protein
Coordinates
chr7:+:62861036..62863482
Molecular Weight (calculated)
50526.6 Da
IEP (calculated)
7.055
GRAVY (calculated)
0.021
Length
484 amino acids
Sequence
(BLAST)
001: MAPSSSCHAA AVLLLAVATL ACHFSVLVVA TDVECHCHGA NGNGCRGLGI NYGTVADDLP SASRSVQLLR ATGAGAVKIY DANADILRAL AGTGMPVSIM
101: VPNSAIPSLA SSRAAAEDWV AANLAPHIPA TRVAYLLVGN EVLSNRAIAG STWRSVVPAM ANLHRALRAH GIRKVKIGTT LAMDALSASY PPSAGAFRDD
201: IAEDVVRPLL RFLNATGSYY FVDAYPYFAW SGNRNAISLD YALFQGAASS RYVDPGNGLV YTNLLDQMLD AVVAAMGRLG YGDVKLAVSE TGWPSGGDAG
301: EAGANVRNAA TYNRNLAARM SKNPGTPARP GAKVPVFLFS LYNEDQKPGA GSERHWGLYY PNGSRVYEVD LTGRRSSYPP LPPADDTDSA PAWCVLGSKA
401: AANETAVAAA VAYACQQGSG TCAAIQPGGA CHEPDMMDAH ASYAFNAYWQ QFRGAGGTCF FDGLAVTTTK DPSHGSCKFA SSLD
Best Arabidopsis Sequence Match ( AT3G07320.1 )
(BLAST)
001: MSLLLHLFAL SLLISVSGAK FSGRPGINYG QLGNNLPSPS DSVNLIKSLN AKRVKLYDAN PKILAALNGT DITVSVMVPN ELLVNISKSA SLSDDWIRSN
101: ILPFYPTTKI RYLLVGNEIL SLPDSELKSS LVPAMRKIQR SLKSLGVKKV KVGTTLATDV LQSSFPPSSG EFREDISGLI MKPMLQFLNR TKSFLFVDVY
201: PYFAWAQDPT HVDLDYAIFE STNVTVTDPV SNLTYHNLFD QMIDAFVFAM KRVGYPDIRI WVAETGWPNN GDYDQIGANI YNAATYNRNV VKKLAADPPV
301: GTPARPGKVL PAFVFALYNE NQKTGPGTER HFGLLHPNGT QVYGIDLSGK TEYKESLPAP ENNDLYKGKI WCVVAKGANW TQLGDALSYA CSQGNNTCDP
401: IQRGGPCQKP DLTVLHASYA FSSYWAQFRK IGGTCSFNGL ATQTIKDPSY GRCEFPSVTL
Arabidopsis Description
O-Glycosyl hydrolases family 17 protein [Source:UniProtKB/TrEMBL;Acc:Q9SRT4]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.