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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 7
  • golgi 5
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane
Any Predictor:plastid, secretory
BaCelLo:secretory
EpiLoc:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d021024_P001 Maize extracellular 92.34 93.11
HORVU5Hr1G075510.2 Barley plasma membrane, vacuole 79.09 78.28
Os09t0502200-01 Rice extracellular 77.43 77.92
TraesCS5B01G279000.2 Wheat extracellular 78.88 68.4
GSMUA_Achr8P08800_001 Banana peroxisome, plastid, vacuole 54.45 67.61
EES14212 Sorghum extracellular 63.98 63.84
GSMUA_Achr11P... Banana extracellular 57.35 63.1
GSMUA_AchrUn_... Banana extracellular, vacuole 55.9 59.47
VIT_05s0062g01430.t01 Wine grape extracellular, vacuole 53.21 55.03
CDY67322 Canola extracellular 24.22 52.94
Solyc12g098560.1.1 Tomato extracellular 49.9 52.51
AT3G07320.1 Thale cress extracellular, vacuole 49.48 51.96
CDY28063 Canola vacuole 49.48 51.96
CDY24629 Canola vacuole 49.48 51.96
CDY08004 Canola vacuole 49.28 51.74
Bra029639.1-P Field mustard vacuole 49.07 51.52
EER90524 Sorghum extracellular 51.35 51.35
CDY45466 Canola vacuole 48.86 51.3
PGSC0003DMT400022520 Potato extracellular, vacuole 49.28 51.29
Solyc09g057630.2.1 Tomato nucleus 49.28 51.29
KRH46623 Soybean nucleus 49.07 50.75
KRG99621 Soybean nucleus 48.24 49.89
CDY50110 Canola extracellular, vacuole 48.45 49.16
KRH20365 Soybean extracellular, vacuole 39.75 49.1
Bra028343.1-P Field mustard extracellular, vacuole 48.24 48.95
CDY53213 Canola extracellular, vacuole 48.45 48.75
CDY18092 Canola extracellular, vacuole 48.03 48.74
AT3G23770.1 Thale cress extracellular 47.83 48.53
Bra001918.1-P Field mustard extracellular, vacuole 48.03 48.33
CDY59775 Canola extracellular, vacuole 47.41 48.31
Bra014979.1-P Field mustard extracellular, vacuole 47.62 48.12
CDY63754 Canola extracellular, vacuole 47.2 47.7
Bra037057.1-P Field mustard extracellular, vacuole 47.0 47.39
CDY06469 Canola extracellular 46.79 47.18
AT4G14080.1 Thale cress vacuole 46.58 47.07
CDY08310 Canola extracellular, vacuole 46.58 46.97
CDY12371 Canola extracellular, vacuole 46.17 46.56
CDY27122 Canola extracellular, vacuole 46.17 46.56
Bra032758.1-P Field mustard vacuole 46.17 46.46
CDY12732 Canola extracellular, vacuole 45.96 46.25
CDY01191 Canola extracellular, vacuole 45.96 46.25
Bra038969.1-P Field mustard extracellular, vacuole 45.76 43.76
CDX74052 Canola vacuole 48.86 41.62
Bra001245.1-P Field mustard vacuole 48.65 41.52
EES07606 Sorghum extracellular, vacuole 40.17 39.51
EES13119 Sorghum extracellular, vacuole 33.95 35.34
EER88444 Sorghum extracellular, vacuole 29.61 35.05
EES01795 Sorghum extracellular, plasma membrane, vacuole 28.99 34.31
EES18301 Sorghum golgi, plasma membrane, vacuole 28.78 33.9
KXG37872 Sorghum endoplasmic reticulum, extracellular, vacuole 33.33 33.89
EES10308 Sorghum endoplasmic reticulum, extracellular, vacuole 32.51 33.62
EER88625 Sorghum extracellular, plasma membrane, vacuole 26.92 33.16
EES05179 Sorghum plastid 27.95 33.01
EER99488 Sorghum extracellular, vacuole 34.16 33.0
EES01451 Sorghum extracellular, plasma membrane, vacuole 33.75 32.8
KXG19201 Sorghum plastid 31.26 32.54
EES10741 Sorghum golgi, plasma membrane, vacuole 27.33 32.2
EER95211 Sorghum extracellular, vacuole 28.78 32.18
KXG29738 Sorghum golgi, mitochondrion, vacuole 27.33 31.43
EER95256 Sorghum extracellular, plasma membrane, vacuole 32.3 31.08
EER93548 Sorghum vacuole 28.57 31.01
KXG36404 Sorghum vacuole 36.23 30.86
KXG38664 Sorghum extracellular, vacuole 27.54 30.65
EER99489 Sorghum extracellular, vacuole 35.82 29.78
KXG36295 Sorghum plasma membrane 32.71 29.21
OQU90151 Sorghum vacuole 28.99 28.34
KXG34744 Sorghum vacuole 28.36 27.08
EER99491 Sorghum extracellular, vacuole 36.02 26.32
OQU92921 Sorghum mitochondrion 27.95 12.34
Protein Annotations
KEGG:00500+3.2.1.39Gene3D:3.20.20.80MapMan:50.3.2EntrezGene:8054770UniProt:C5X4N0EnsemblPlants:EER99139
ProteinID:EER99139ProteinID:EER99139.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005488
GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0005975GO:GO:0008150GO:GO:0008152
GO:GO:0016020GO:GO:0016787GO:GO:0030246GO:GO:0030247GO:GO:0046658InterPro:Glyco_hydro_17
InterPro:Glycoside_hydrolase_SFPFAM:PF00332PFAM:PF07983PANTHER:PTHR32227PANTHER:PTHR32227:SF117SMART:SM00768
EnsemblPlantsGene:SORBI_3002G255600SUPFAM:SSF51445SignalP:SignalP-noTMUniParc:UPI0001A83BF7InterPro:X8RefSeq:XP_002462618.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr2:-:64181848..64186327
Molecular Weight (calculated)
52418.7 Da
IEP (calculated)
8.755
GRAVY (calculated)
-0.052
Length
483 amino acids
Sequence
(BLAST)
001: MAVSMAAPPL LTLPFLFLLF ATVACRGAYG ASGGYGLGVN YGRVADDIPS PRRSVELLRA AGAGSVKIYD ANPGVLRALA GTRWPVSIMV PNEIIPDLAA
101: SVAAADRWVA KNLVPYYPAT RVKFLLVGNE ILSDHSIANS TWPRLVPAME NIHRSLRKRG ISSVKIGTTL AMDALADGAF PRPPSAATFR ADIAEAVVRP
201: LLHFLNGTNS YYFVDAYPYF VWADNNLTVS LDYALFQGGR LRYVDPGTRL TYTNLLDEML DAVVIAMAKL GYGHVKLAIA ETGWPNGCDY DQIGGNVHNA
301: AIYNRNLAAR MVKNPGTPVR PGAKMPVFVF SLYNEDLKPG PGTERHWGLY YANGTAVYEI DLTGRRPLWS YPPLPAPENN TPYKGPIWCL LSAAASNKLN
401: ETAVGNALTY ACGQGNGTCD AIQPGKNCYM PNTTVAHASY AFNSYWQQFR KIGATCYFNN LAEQTIKDPS HGSCKFPSSL ESP
Best Arabidopsis Sequence Match ( AT3G07320.1 )
(BLAST)
001: MSLLLHLFAL SLLISVSGAK FSGRPGINYG QLGNNLPSPS DSVNLIKSLN AKRVKLYDAN PKILAALNGT DITVSVMVPN ELLVNISKSA SLSDDWIRSN
101: ILPFYPTTKI RYLLVGNEIL SLPDSELKSS LVPAMRKIQR SLKSLGVKKV KVGTTLATDV LQSSFPPSSG EFREDISGLI MKPMLQFLNR TKSFLFVDVY
201: PYFAWAQDPT HVDLDYAIFE STNVTVTDPV SNLTYHNLFD QMIDAFVFAM KRVGYPDIRI WVAETGWPNN GDYDQIGANI YNAATYNRNV VKKLAADPPV
301: GTPARPGKVL PAFVFALYNE NQKTGPGTER HFGLLHPNGT QVYGIDLSGK TEYKESLPAP ENNDLYKGKI WCVVAKGANW TQLGDALSYA CSQGNNTCDP
401: IQRGGPCQKP DLTVLHASYA FSSYWAQFRK IGGTCSFNGL ATQTIKDPSY GRCEFPSVTL
Arabidopsis Description
O-Glycosyl hydrolases family 17 protein [Source:UniProtKB/TrEMBL;Acc:Q9SRT4]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.