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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 6
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG36404 Sorghum vacuole 68.16 69.84
EER99488 Sorghum extracellular, vacuole 54.39 63.2
EER99491 Sorghum extracellular, vacuole 69.88 61.42
TraesCS7B01G285700.2 Wheat extracellular 56.45 58.68
Os07t0538000-01 Rice extracellular 55.08 57.35
HORVU7Hr1G091100.3 Barley vacuole 55.77 57.04
Os07t0539400-00 Rice extracellular, plastid, vacuole 50.6 56.43
TraesCS2B01G241200.3 Wheat endoplasmic reticulum, extracellular, vacuole 54.39 56.43
TraesCS1D01G431300.1 Wheat vacuole 55.42 56.1
TraesCS1B01G453900.1 Wheat vacuole 55.08 56.04
TraesCS2D01G221800.1 Wheat extracellular, vacuole 52.84 55.82
TraesCS1D01G430700.1 Wheat extracellular, vacuole 54.04 55.77
TraesCS1D01G431200.1 Wheat extracellular, vacuole 53.53 55.73
TraesCS2A01G216200.1 Wheat extracellular, vacuole 52.84 55.72
HORVU2Hr1G044450.4 Barley extracellular, vacuole 53.53 55.44
TraesCS1A01G422500.1 Wheat vacuole 54.22 55.26
TraesCS1B01G454500.1 Wheat vacuole 53.18 55.08
TraesCS2B01G241300.1 Wheat extracellular, vacuole 52.15 54.99
EES07606 Sorghum extracellular, vacuole 46.47 54.99
HORVU1Hr1G092310.2 Barley extracellular 53.36 54.87
TraesCS1A01G422900.1 Wheat extracellular, vacuole 52.67 54.84
GSMUA_Achr9P16150_001 Banana cytosol, extracellular, plastid, vacuole 38.21 54.28
Zm00001d021695_P001 Maize extracellular 60.24 54.1
HORVU2Hr1G044460.2 Barley vacuole 51.46 53.97
Zm00001d006538_P001 Maize vacuole 59.72 53.47
Os08t0244500-00 Rice extracellular 51.81 53.46
GSMUA_Achr8P22560_001 Banana extracellular, vacuole 38.73 53.44
HORVU1Hr1G092240.3 Barley extracellular, vacuole 52.84 52.3
Os07t0539100-01 Rice extracellular 49.4 51.9
TraesCS5A01G338400.3 Wheat endoplasmic reticulum, extracellular, vacuole 43.55 51.32
Os07t0539300-01 Rice extracellular 50.95 51.3
HORVU5Hr1G084900.2 Barley endoplasmic reticulum, extracellular, vacuole 42.17 50.94
CDY06601 Canola endoplasmic reticulum, extracellular 38.38 49.67
TraesCS1B01G454200.1 Wheat extracellular, vacuole 34.08 49.38
CDY20780 Canola extracellular, vacuole 38.04 49.22
CDY56498 Canola extracellular, vacuole 37.35 49.09
Os07t0539900-01 Rice extracellular 50.77 49.0
Bra035561.1-P Field mustard extracellular, vacuole 38.73 48.91
CDY18049 Canola extracellular, vacuole 37.01 48.64
VIT_12s0059g01320.t01 Wine grape extracellular, vacuole 39.24 48.41
CDY17308 Canola extracellular, vacuole 37.35 48.33
KRH14333 Soybean endoplasmic reticulum, extracellular 38.21 48.16
CDY19908 Canola extracellular, vacuole 37.52 47.49
CDY12009 Canola extracellular, vacuole 37.52 47.39
KRH73795 Soybean extracellular, vacuole 38.38 47.25
CDY36734 Canola extracellular, vacuole 37.35 47.17
CDY46679 Canola extracellular, vacuole 36.14 47.09
CDX92794 Canola endoplasmic reticulum, extracellular 36.49 47.01
AT4G26830.2 Thale cress endoplasmic reticulum, extracellular 37.01 46.84
AT2G05790.1 Thale cress extracellular, vacuole 37.87 46.61
Bra015166.1-P Field mustard extracellular, vacuole 37.87 46.51
Bra002927.1-P Field mustard extracellular, vacuole 37.01 46.44
VIT_19s0090g01070.t01 Wine grape extracellular, plasma membrane, vacuole 37.52 46.28
AT5G55180.2 Thale cress endoplasmic reticulum, extracellular 37.01 46.24
KRH73361 Soybean extracellular, vacuole 37.52 46.19
PGSC0003DMT400033482 Potato extracellular, vacuole 37.52 45.99
Solyc07g049370.2.1 Tomato extracellular, vacuole 36.66 45.51
PGSC0003DMT400001833 Potato extracellular, vacuole 36.49 45.3
Solyc12g014420.1.1 Tomato extracellular 37.35 45.21
KRH14776 Soybean extracellular, vacuole 37.01 45.07
PGSC0003DMT400033484 Potato extracellular, vacuole 29.6 43.11
Bra019084.1-P Field mustard endoplasmic reticulum, extracellular 36.32 42.8
EES01795 Sorghum extracellular, plasma membrane, vacuole 27.71 39.46
EER88444 Sorghum extracellular, vacuole 27.02 38.48
EES18301 Sorghum golgi, plasma membrane, vacuole 26.68 37.8
Bra028988.1-P Field mustard extracellular, vacuole 36.66 37.04
EER88625 Sorghum extracellular, plasma membrane, vacuole 24.96 36.99
EES05179 Sorghum plastid 25.99 36.92
EES13119 Sorghum extracellular, vacuole 29.09 36.42
EES01451 Sorghum extracellular, plasma membrane, vacuole 31.15 36.42
EES14212 Sorghum extracellular 30.12 36.16
EER99139 Sorghum endoplasmic reticulum, plasma membrane 29.78 35.82
KXG37872 Sorghum endoplasmic reticulum, extracellular, vacuole 28.74 35.16
EES10741 Sorghum golgi, plasma membrane, vacuole 24.61 34.88
KXG29738 Sorghum golgi, mitochondrion, vacuole 24.61 34.05
EES10308 Sorghum endoplasmic reticulum, extracellular, vacuole 27.37 34.05
KXG38664 Sorghum extracellular, vacuole 25.13 33.64
EER90524 Sorghum extracellular 27.88 33.54
EER95256 Sorghum extracellular, plasma membrane, vacuole 28.92 33.47
OQU90151 Sorghum vacuole 27.88 32.79
KXG19201 Sorghum plastid 26.16 32.76
EER95211 Sorghum extracellular, vacuole 22.89 30.79
KXG36295 Sorghum plasma membrane 28.23 30.31
EER93548 Sorghum vacuole 23.06 30.11
KXG34744 Sorghum vacuole 25.47 29.25
OQU92921 Sorghum mitochondrion 26.85 14.26
Protein Annotations
KEGG:00500+3.2.1.39MapMan:50.3.2EntrezGene:8084082UniProt:C5XAS4EnsemblPlants:EER99489ProteinID:EER99489
ProteinID:EER99489.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005488GO:GO:0005575
GO:GO:0005623GO:GO:0005886GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0016020
GO:GO:0016787GO:GO:0030246GO:GO:0030247GO:GO:0046658InterPro:Glyco_hydro_17InterPro:Glycoside_hydrolase_SF
PFAM:PF00332PFAM:PF07983PANTHER:PTHR32227PANTHER:PTHR32227:SF235SMART:SM00768EnsemblPlantsGene:SORBI_3002G328300
SUPFAM:SSF51445unigene:Sbi.10903SignalP:SignalP-noTMUniParc:UPI0001A8413EInterPro:X8RefSeq:XP_002462968.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr2:-:69777273..69781238
Molecular Weight (calculated)
62144.1 Da
IEP (calculated)
4.994
GRAVY (calculated)
-0.144
Length
581 amino acids
Sequence
(BLAST)
001: MALTRLLVLL LGAAALPVLL FRTAEAREVG VNYGRVANDL PDPAAVVQLL RDNGITMVRI YDTDDAVLRS FANTGIKLMV MLPNENLADA ARSPSYAADW
101: ARRRVAAYLP ATRIHAVSVG NEVFDSRPDL TPLLVPAMTN VHAALAQLGL ADAIKVSTPL SFAAVAVSWP PSAGRFRDDI AQPVMRPMLE FLQRTGSYLT
201: INLYPYFAYA AQPDKISRDY FLGNPNPGVR DPDTGLMYYS VLDAQRDATF SAMDKLGFTS LQAIPGETGS ASAGRPKPGP RHNKPLHQPS WELAVGDDGD
301: GVRVDPPAAS KANAQAYNNN VINRVLAGRT GTPLRPDADM DVYIFALFNE NQKGSGPDDI EANFGLFYPN MEKVYEFDFR GGGVPPAPGA ESWCVANASV
401: GESWLQAALE YACGHGADCS AIQPGATCFE PDTVVAHASY AFNSYYQRNG RSNGTCDFNG AGYIVYQEPA GTCDPNASWC VANAAVGDAR LLDGLNYACA
501: NGADCSTIQP GAPCFEPNTM VAHASHAFNS YYQRNRRASG TCDFAGAASV VYRAPKYGNC VLPSKASIEE TIAKSEGEAA I
Best Arabidopsis Sequence Match ( AT5G55180.1 )
(BLAST)
001: MAVFVLSLLI LSSFSAIPFT YADSGMIGVN YGRIADNLPA PEKVVELLKT QGINRIKLYD TETTVLTALA NSGIKVVVSL PNENLASAAA DQSYTDTWVQ
101: DNIKKYIPAT DIEAIAVGNE VFVDPRNTTT YLVPAMKNVQ SSLVKFNLDK SIKISSPIAL SALASSYPPS AGSFKPELIE PVIKPMLDLL RKTSSHLMVN
201: AYPFFAYAAN ADKISLDYAL FKENAGNVDS GNGLKYNSLL DAQIDAVFAA MSAVGFNDVK LVVTETGWPS AGDENEIGAG SANAAAYNGG LVKRVLTGNG
301: TPLKPKEPLN VYLFALFNEN QKTGPTSERN YGLFYPNENK VYDVSLNGKS TPVNDNKEKV VPVKPSLVGQ TWCVANGKTT KEKLQEGLDY ACGEGGADCR
401: PIQPGATCYN PESLEAHASY AFNSYYQKNA RGVGTCNFGG AAYVVSQPPK YGKCEFPTGH
Arabidopsis Description
O-Glycosyl hydrolases family 17 protein [Source:UniProtKB/TrEMBL;Acc:F4K3D8]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.