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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • endoplasmic reticulum 6
  • golgi 5
  • extracellular 6
  • vacuole 4
  • plasma membrane 4
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular
Any Predictor:plastid, secretory
BaCelLo:endoplasmic reticulum, extracellular, golgi
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY17308 Canola extracellular, vacuole 86.67 89.75
CDY19908 Canola extracellular, vacuole 87.96 89.11
Bra002927.1-P Field mustard extracellular, vacuole 88.6 88.98
CDY20780 Canola extracellular, vacuole 85.59 88.64
CDY06601 Canola endoplasmic reticulum, extracellular 85.59 88.64
Bra035561.1-P Field mustard extracellular, vacuole 87.53 88.48
CDY12009 Canola extracellular, vacuole 87.31 88.26
CDY36734 Canola extracellular, vacuole 86.67 87.61
AT4G26830.2 Thale cress endoplasmic reticulum, extracellular 73.33 74.29
KRH14333 Soybean endoplasmic reticulum, extracellular 69.89 70.5
KRH73795 Soybean extracellular, vacuole 69.68 68.64
Bra028988.1-P Field mustard extracellular, vacuole 84.52 68.35
VIT_19s0090g01070.t01 Wine grape extracellular, plasma membrane, vacuole 69.03 68.15
PGSC0003DMT400033482 Potato extracellular, vacuole 65.59 64.35
Solyc12g014420.1.1 Tomato extracellular 65.38 63.33
GSMUA_Achr9P16150_001 Banana cytosol, extracellular, plastid, vacuole 55.7 63.33
PGSC0003DMT400033484 Potato extracellular, vacuole 52.47 61.15
AT2G05790.1 Thale cress extracellular, vacuole 61.72 60.81
GSMUA_Achr8P22560_001 Banana extracellular, vacuole 53.98 59.62
TraesCS6A01G325300.1 Wheat cytosol, extracellular, vacuole 57.42 57.42
TraesCS6B01G355600.1 Wheat vacuole 58.28 56.69
TraesCS6D01G305000.1 Wheat extracellular 57.63 55.95
Os02t0771700-01 Rice extracellular 58.28 55.53
Zm00001d018214_P001 Maize extracellular 57.2 54.51
EES07606 Sorghum extracellular, vacuole 57.42 54.38
HORVU6Hr1G079630.2 Barley mitochondrion, plastid, vacuole 49.89 42.88
AT1G30080.1 Thale cress vacuole 36.77 41.91
EER99488 Sorghum extracellular, vacuole 44.52 41.4
HORVU5Hr1G084900.2 Barley endoplasmic reticulum, extracellular, vacuole 41.51 40.12
TraesCS5A01G338400.3 Wheat endoplasmic reticulum, extracellular, vacuole 42.15 39.76
TraesCS1B01G454200.1 Wheat extracellular, vacuole 34.19 39.65
AT3G46570.1 Thale cress vacuole 30.32 39.61
AT2G27500.1 Thale cress vacuole 33.12 39.29
AT5G24318.1 Thale cress extracellular 38.28 38.86
Zm00001d021690_P001 Maize extracellular 48.6 38.7
TraesCS7B01G285700.2 Wheat extracellular 45.38 37.75
Os07t0538000-01 Rice extracellular 44.95 37.46
Os07t0539100-01 Rice extracellular 44.52 37.43
AT2G26600.1 Thale cress endoplasmic reticulum, golgi, vacuole 31.18 37.37
AT4G18340.1 Thale cress vacuole 31.83 37.28
TraesCS1B01G454500.1 Wheat vacuole 44.95 37.25
KXG36404 Sorghum vacuole 45.38 37.21
TraesCS1A01G422900.1 Wheat extracellular, vacuole 44.52 37.1
EER99489 Sorghum extracellular, vacuole 46.24 37.01
TraesCS2A01G216200.1 Wheat extracellular, vacuole 43.66 36.84
AT3G07320.1 Thale cress extracellular, vacuole 36.34 36.74
TraesCS2B01G241300.1 Wheat extracellular, vacuole 43.44 36.66
TraesCS1B01G453900.1 Wheat vacuole 44.95 36.6
TraesCS1D01G430700.1 Wheat extracellular, vacuole 44.3 36.59
TraesCS1D01G431300.1 Wheat vacuole 45.16 36.59
HORVU2Hr1G044450.4 Barley extracellular, vacuole 44.09 36.54
AT5G42100.1 Thale cress extracellular, vacuole 33.33 36.47
Os07t0539400-00 Rice extracellular, plastid, vacuole 40.86 36.47
HORVU7Hr1G091100.3 Barley vacuole 44.52 36.44
TraesCS1D01G431200.1 Wheat extracellular, vacuole 43.44 36.2
AT1G32860.1 Thale cress extracellular, plasma membrane, vacuole 33.12 36.15
HORVU1Hr1G092310.2 Barley extracellular 43.87 36.11
HORVU2Hr1G044460.2 Barley vacuole 43.01 36.1
AT3G15800.1 Thale cress golgi, plastid, vacuole 30.97 36.09
AT3G55430.1 Thale cress extracellular 34.84 36.08
TraesCS2B01G241200.3 Wheat endoplasmic reticulum, extracellular, vacuole 43.44 36.07
TraesCS2D01G221800.1 Wheat extracellular, vacuole 42.58 36.0
AT4G34480.1 Thale cress extracellular, plasma membrane, vacuole 38.92 35.91
Os08t0244500-00 Rice extracellular 43.44 35.88
TraesCS1A01G422500.1 Wheat vacuole 43.87 35.79
HORVU1Hr1G092240.3 Barley extracellular, vacuole 44.52 35.26
Os07t0539300-01 Rice extracellular 43.66 35.18
AT2G01630.1 Thale cress extracellular 37.63 34.93
AT1G66250.1 Thale cress vacuole 37.85 34.85
AT2G16230.1 Thale cress vacuole 37.42 34.59
AT5G56590.1 Thale cress extracellular, plasma membrane, vacuole 37.63 34.59
Zm00001d021695_P001 Maize extracellular 47.53 34.16
AT5G42720.1 Thale cress extracellular, plasma membrane, vacuole 31.83 33.79
AT3G13560.4 Thale cress plasma membrane 36.56 33.66
AT4G29360.2 Thale cress vacuole 39.35 33.64
Zm00001d006538_P001 Maize vacuole 46.67 33.44
EER99491 Sorghum extracellular, vacuole 47.53 33.43
AT4G14080.1 Thale cress vacuole 33.76 32.85
AT3G23770.1 Thale cress extracellular 33.55 32.77
Zm00001d021697_P001 Maize extracellular 48.17 32.23
AT1G11820.2 Thale cress endoplasmic reticulum, extracellular, plasma membrane 35.27 32.09
Os07t0539900-01 Rice extracellular 41.51 32.06
AT2G39640.1 Thale cress endoplasmic reticulum, extracellular, vacuole 29.68 25.14
Protein Annotations
KEGG:00500+3.2.1.39Gene3D:3.20.20.80MapMan:50.3.2EntrezGene:835611ProteinID:AED96597.1ArrayExpress:AT5G55180
EnsemblPlantsGene:AT5G55180RefSeq:AT5G55180TAIR:AT5G55180RefSeq:AT5G55180-TAIR-GEnsemblPlants:AT5G55180.2TAIR:AT5G55180.2
Unigene:At.29458UniProt:F4K3D8GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005488
GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0005975GO:GO:0008150GO:GO:0008152
GO:GO:0016020GO:GO:0016787GO:GO:0016798GO:GO:0030246GO:GO:0030247GO:GO:0046658
InterPro:Glyco_hydro_17InterPro:Glycoside_hydrolase_SFRefSeq:NP_001154780.1PFAM:PF00332PFAM:PF07983PO:PO:0000013
PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081
PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007103PO:PO:0007115
PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009
PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009031PO:PO:0009032PO:PO:0009046
PO:PO:0009052PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022ScanProsite:PS00587
PANTHER:PTHR32227PANTHER:PTHR32227:SF102SMART:SM00768SUPFAM:SSF51445SignalP:SignalP-noTMUniParc:UPI0001A7B2FC
InterPro:X8SEG:seg::::
Description
O-Glycosyl hydrolases family 17 protein [Source:UniProtKB/TrEMBL;Acc:F4K3D8]
Coordinates
chr5:+:22388782..22390714
Molecular Weight (calculated)
50101.5 Da
IEP (calculated)
5.976
GRAVY (calculated)
-0.128
Length
465 amino acids
Sequence
(BLAST)
001: MAVFVLSLLI LSSFSAIPFT YADSGMIGVN YGRIADNLPA PEKVVELLKT QGINRIKLYD TETTVLTALA NSGIKVVVSL PNENLASAAA DQSYTDTWVQ
101: DNIKKYIPAT DIEAIAVGNE VFVDPRNTTT YLVPAMKNVQ SSLVKFNLDK SIKISSPIAL SALASSYPPS AGSFKPELIE PVIKPMLDLL RKTSSHLMVN
201: AYPFFAYAAN ADKISLDYAL FKENAGNVDS GNGLKYNSLL DAQIDAVFAA MSAVGFNDVK LVVTETGWPS AGDENEIGAG SANAAAYNGG LVKRVLTGNG
301: TPLKPKEPLN VYLFALFNEN QKTGPTSERN YGLFYPNENK VYDVSLNGKS TPVNDNKEKV VPVKPSLVGQ TWCVANGKTT KEKLQEGLDY ACGEGGADCR
401: PIQPGATCYN PESLEAHASY AFNSYYQKNA RGVGTCNFGG AAYVVSQPPS KVWEMRVSNR ALKWI
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.