Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- golgi 5
- endoplasmic reticulum 5
- plasma membrane 4
- vacuole 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036510.1-P | Field mustard | cytoskeleton, extracellular, plastid, vacuole | 80.35 | 81.96 |
| CDX87130 | Canola | vacuole | 81.44 | 80.22 |
| CDY19838 | Canola | extracellular, vacuole | 80.79 | 79.23 |
| VIT_16s0098g01560.t01 | Wine grape | extracellular | 62.45 | 62.04 |
| Solyc03g082900.2.1 | Tomato | extracellular | 50.0 | 60.58 |
| PGSC0003DMT400047660 | Potato | extracellular | 49.34 | 59.16 |
| KRH52523 | Soybean | extracellular, plasma membrane, vacuole | 39.96 | 52.89 |
| HORVU2Hr1G102010.1 | Barley | golgi, mitochondrion, vacuole | 40.39 | 52.56 |
| AT3G46570.1 | Thale cress | vacuole | 40.83 | 52.53 |
| Zm00001d001791_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 51.53 | 52.44 |
| TraesCS2D01G436800.1 | Wheat | vacuole | 44.54 | 51.78 |
| EES13119 | Sorghum | extracellular, vacuole | 51.53 | 50.86 |
| TraesCS2A01G439500.1 | Wheat | extracellular | 50.22 | 50.0 |
| TraesCS2B01G459400.1 | Wheat | extracellular | 50.22 | 50.0 |
| Os04t0681950-00 | Rice | vacuole | 48.25 | 49.0 |
| AT3G55430.1 | Thale cress | extracellular | 44.98 | 45.88 |
| GSMUA_Achr3P14330_001 | Banana | cytosol, plasma membrane, vacuole | 47.82 | 43.37 |
| AT4G26830.2 | Thale cress | endoplasmic reticulum, extracellular | 40.61 | 40.52 |
| AT1G30080.1 | Thale cress | vacuole | 35.59 | 39.95 |
| AT2G16230.1 | Thale cress | vacuole | 43.67 | 39.76 |
| AT2G05790.1 | Thale cress | extracellular, vacuole | 40.39 | 39.19 |
| AT4G34480.1 | Thale cress | extracellular, plasma membrane, vacuole | 42.79 | 38.89 |
| AT5G55180.2 | Thale cress | endoplasmic reticulum, extracellular | 38.86 | 38.28 |
| AT5G42720.1 | Thale cress | extracellular, plasma membrane, vacuole | 35.59 | 37.21 |
| AT4G18340.1 | Thale cress | vacuole | 32.1 | 37.03 |
| AT2G27500.1 | Thale cress | vacuole | 31.0 | 36.22 |
| AT3G15800.1 | Thale cress | golgi, plastid, vacuole | 30.57 | 35.09 |
| AT2G26600.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 29.26 | 34.54 |
| AT5G42100.1 | Thale cress | extracellular, vacuole | 31.88 | 34.35 |
| AT2G01630.1 | Thale cress | extracellular | 37.55 | 34.33 |
| AT1G32860.1 | Thale cress | extracellular, plasma membrane, vacuole | 31.66 | 34.04 |
| AT3G23770.1 | Thale cress | extracellular | 35.37 | 34.03 |
| AT3G13560.4 | Thale cress | plasma membrane | 36.46 | 33.07 |
| AT4G14080.1 | Thale cress | vacuole | 34.5 | 33.05 |
| AT3G07320.1 | Thale cress | extracellular, vacuole | 32.53 | 32.39 |
| AT1G66250.1 | Thale cress | vacuole | 35.59 | 32.28 |
| AT2G39640.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 37.99 | 31.69 |
| AT1G11820.2 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 34.93 | 31.31 |
| AT4G29360.2 | Thale cress | vacuole | 36.68 | 30.88 |
| AT5G56590.1 | Thale cress | extracellular, plasma membrane, vacuole | 32.97 | 29.84 |
Protein Annotations
| KEGG:00500+3.2.1.39 | Gene3D:3.20.20.80 | EntrezGene:3770717 | MapMan:50.3.2 | ProteinID:AED93290.1 | ProteinID:ANM69703.1 |
| ArrayExpress:AT5G24318 | EnsemblPlantsGene:AT5G24318 | RefSeq:AT5G24318 | TAIR:AT5G24318 | RefSeq:AT5G24318-TAIR-G | EnsemblPlants:AT5G24318.1 |
| TAIR:AT5G24318.1 | Unigene:At.51413 | UniProt:F4KH28 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0005975 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030246 | GO:GO:0030247 |
| GO:GO:0046658 | InterPro:Glyco_hydro_17 | InterPro:Glycoside_hydrolase_SF | RefSeq:NP_001031936.1 | RefSeq:NP_001331363.1 | PFAM:PF00332 |
| PFAM:PF07983 | PO:PO:0000293 | ScanProsite:PS00587 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF92 | SMART:SM00768 |
| SUPFAM:SSF51445 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI00005DC11E | InterPro:X8 | : |
Description
O-Glycosyl hydrolases family 17 protein [Source:UniProtKB/TrEMBL;Acc:F4KH28]
Coordinates
chr5:-:8281976..8284126
Molecular Weight (calculated)
50768.5 Da
IEP (calculated)
5.764
GRAVY (calculated)
-0.078
Length
458 amino acids
Sequence
(BLAST)
(BLAST)
001: MNYVLPFFSL SMFTIVGVLL ILSTGSEASI GVNYGTLANN LPPPQQVAEF LLHSTVINRI RLFDTDPQIL QAFANTGIAV TVTVPNDQIP HLTNLSSAKQ
101: WISDHIQPHF PSTNIIRILV GNEVISTADH LLIRTLIPAM QSLHTALVSA SLHRRIQIST PHSLGTLTNS TPPSSAKFRR GYDAQVLKPL LSFLRSTSSP
201: FVVNPYPFFG YSIETLDFAL FRPNPGLFDQ HTKLLYTNML DAQLDSVYSA MDKLGFSDVE IVIGEIGWPS EGDIDQIGVD VDTAAEFNKN LIARVDSGTG
301: TPLMPNRTFE TYIFALFNEN LKSGPTSERN FGIFRSDLTP IYDIGILRPT FRSSDPVYNP RSPVRGSSSK RWCVTKAGAE TVALQRNIDY VCGLGLDCRP
401: INEGGLCYLP NTVKAHSKYA MNLYYQTMEK HEFDCDFDNT GEITTIDPSY GNCEYQAN
101: WISDHIQPHF PSTNIIRILV GNEVISTADH LLIRTLIPAM QSLHTALVSA SLHRRIQIST PHSLGTLTNS TPPSSAKFRR GYDAQVLKPL LSFLRSTSSP
201: FVVNPYPFFG YSIETLDFAL FRPNPGLFDQ HTKLLYTNML DAQLDSVYSA MDKLGFSDVE IVIGEIGWPS EGDIDQIGVD VDTAAEFNKN LIARVDSGTG
301: TPLMPNRTFE TYIFALFNEN LKSGPTSERN FGIFRSDLTP IYDIGILRPT FRSSDPVYNP RSPVRGSSSK RWCVTKAGAE TVALQRNIDY VCGLGLDCRP
401: INEGGLCYLP NTVKAHSKYA MNLYYQTMEK HEFDCDFDNT GEITTIDPSY GNCEYQAN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.