Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- golgi 5
- endoplasmic reticulum 6
- plasma membrane 4
- vacuole 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY20461 | Canola | extracellular | 61.02 | 74.44 |
| Bra005028.1-P | Field mustard | extracellular | 60.29 | 73.88 |
| CDY53600 | Canola | extracellular | 60.11 | 73.33 |
| AT3G55430.1 | Thale cress | extracellular | 44.08 | 53.9 |
| VIT_13s0019g01180.t01 | Wine grape | extracellular, vacuole | 40.44 | 49.66 |
| KRH01668 | Soybean | extracellular | 40.62 | 48.9 |
| GSMUA_Achr6P05040_001 | Banana | extracellular, vacuole | 35.52 | 45.35 |
| AT3G46570.1 | Thale cress | vacuole | 28.96 | 44.66 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, extracellular, vacuole | 35.7 | 42.42 |
| Solyc07g005330.2.1 | Tomato | extracellular | 35.15 | 42.05 |
| TraesCS4D01G136800.1 | Wheat | cytosol, extracellular, plastid, vacuole | 34.24 | 41.87 |
| TraesCS4A01G175900.1 | Wheat | extracellular | 35.15 | 41.87 |
| TraesCS4B01G142000.1 | Wheat | golgi | 35.15 | 41.77 |
| PGSC0003DMT400008245 | Potato | vacuole | 34.79 | 41.34 |
| GSMUA_Achr11P... | Banana | plasma membrane, vacuole | 30.42 | 41.13 |
| Os11t0704600-01 | Rice | extracellular | 34.79 | 40.47 |
| EES10308 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 33.33 | 39.19 |
| TraesCS5A01G329700.1 | Wheat | vacuole | 27.87 | 38.93 |
| Zm00001d004768_P001 | Maize | extracellular | 32.06 | 38.77 |
| TraesCS5D01G335600.1 | Wheat | vacuole | 27.69 | 38.68 |
| TraesCSU01G204400.1 | Wheat | extracellular, vacuole | 27.5 | 38.42 |
| TraesCSU01G239400.1 | Wheat | extracellular, vacuole | 27.5 | 38.42 |
| HORVU4Hr1G027740.1 | Barley | vacuole | 34.61 | 38.08 |
| AT5G24318.1 | Thale cress | extracellular | 31.69 | 37.99 |
| PGSC0003DMT400060499 | Potato | extracellular | 33.7 | 36.71 |
| Solyc05g054440.2.1 | Tomato | unclear | 34.97 | 36.5 |
| AT2G16230.1 | Thale cress | vacuole | 32.42 | 35.39 |
| AT4G34480.1 | Thale cress | extracellular, plasma membrane, vacuole | 31.88 | 34.72 |
| Zm00001d019248_P001 | Maize | extracellular, vacuole | 31.33 | 34.54 |
| TraesCS5D01G335500.1 | Wheat | golgi, plasma membrane, vacuole | 29.69 | 34.53 |
| KXG34744 | Sorghum | vacuole | 30.78 | 33.4 |
| AT2G27500.1 | Thale cress | vacuole | 23.5 | 32.91 |
| TraesCS5A01G329600.1 | Wheat | extracellular, plasma membrane, vacuole | 28.78 | 32.78 |
| Os07t0240200-01 | Rice | endoplasmic reticulum, extracellular, plasma membrane | 29.87 | 32.73 |
| AT5G42100.1 | Thale cress | extracellular, vacuole | 25.14 | 32.47 |
| AT1G30080.1 | Thale cress | vacuole | 24.04 | 32.35 |
| TraesCS5B01G329800.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, vacuole | 28.78 | 32.24 |
| HORVU5Hr1G083710.1 | Barley | golgi, mitochondrion, vacuole | 29.51 | 32.21 |
| AT2G05790.1 | Thale cress | extracellular, vacuole | 27.32 | 31.78 |
| AT1G32860.1 | Thale cress | extracellular, plasma membrane, vacuole | 24.59 | 31.69 |
| AT4G18340.1 | Thale cress | vacuole | 22.77 | 31.49 |
| AT3G15800.1 | Thale cress | golgi, plastid, vacuole | 22.77 | 31.33 |
| AT3G23770.1 | Thale cress | extracellular | 27.14 | 31.3 |
| AT3G07320.1 | Thale cress | extracellular, vacuole | 26.05 | 31.09 |
| AT2G26600.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 21.86 | 30.93 |
| AT4G14080.1 | Thale cress | vacuole | 26.59 | 30.54 |
| AT4G26830.2 | Thale cress | endoplasmic reticulum, extracellular | 25.5 | 30.5 |
| AT5G42720.1 | Thale cress | extracellular, plasma membrane, vacuole | 24.23 | 30.37 |
| AT5G55180.2 | Thale cress | endoplasmic reticulum, extracellular | 25.14 | 29.68 |
| AT2G01630.1 | Thale cress | extracellular | 26.96 | 29.54 |
| AT1G11820.2 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 26.59 | 28.57 |
| AT5G56590.1 | Thale cress | extracellular, plasma membrane, vacuole | 26.05 | 28.26 |
| AT3G13560.4 | Thale cress | plasma membrane | 25.87 | 28.12 |
| AT1G66250.1 | Thale cress | vacuole | 24.77 | 26.93 |
| AT4G29360.2 | Thale cress | vacuole | 26.05 | 26.29 |
Protein Annotations
| KEGG:00500+3.2.1.39 | Gene3D:1.20.58.1040 | Gene3D:3.20.20.80 | MapMan:50.3.2 | EntrezGene:818547 | ProteinID:AAB97119.1 |
| ProteinID:AAM14919.1 | ProteinID:AEC09701.1 | ArrayExpress:AT2G39640 | EnsemblPlantsGene:AT2G39640 | RefSeq:AT2G39640 | TAIR:AT2G39640 |
| RefSeq:AT2G39640-TAIR-G | EnsemblPlants:AT2G39640.1 | TAIR:AT2G39640.1 | Unigene:At.37151 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0005975 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0030246 | GO:GO:0030247 |
| GO:GO:0046658 | InterPro:Glyco_hydro_17 | InterPro:Glycoside_hydrolase_SF | RefSeq:NP_181494.1 | UniProt:O48812 | PFAM:PF00332 |
| PFAM:PF07983 | PO:PO:0000084 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF142 | SMART:SM00768 | SUPFAM:SSF51445 |
| TMHMM:TMhelix | UniParc:UPI0000048621 | InterPro:X8 | SEG:seg | : | : |
Description
Glycosyl hydrolase family 17 protein [Source:UniProtKB/TrEMBL;Acc:O48812]
Coordinates
chr2:-:16525086..16527038
Molecular Weight (calculated)
59821.2 Da
IEP (calculated)
6.140
GRAVY (calculated)
-0.119
Length
549 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKTIRSFIL PFLLIVAGVI FQLSAVTSAI GINYGTLGNL QPPQQVVDFI KTKTTFDSVK IYDANPDILR AFAGSEINIT IMVPNGNIPA MVNVANARQW
101: VAANVLPFQQ QIKFKYVCVG NEILASNDNN LISNLVPAMQ SLNEALKASN LTYIKVTTPH AFTISYNRNT PSESRFTNDQ KDIFTKILEF HRQAKSPFMI
201: NAYTFFTMDT NNVNYAIFGP SNAITDTNTQ QTYTNMFDAV MDATYSAMKA LGYGDVDIAV GETGWPTACD ASWCSPQNAE NYNLNIIKRA QVIGTPLMPN
301: RHIDIFIFAL FNEDGKPGPT RERNWGIFKP DFSPMYDVGV LKGGGSPLPF PPINNNGKWC VGKPEATLMQ LQANIDWVCS HGIDCTPISP GGICFDNNNM
401: TTRSSFIMNA YYQSKGCVDV VCDFSGTGIV TSTNPSTSTC PIPIGEGGGG NGAKSKSANW CMAKQEATET QLQANIDWVC SQGIDCKPIS PGGICFDNNN
501: MKTRSTFIMN AYYESKGYSK DACDFRGSGI VTTTNPSTST CVVPASVTL
101: VAANVLPFQQ QIKFKYVCVG NEILASNDNN LISNLVPAMQ SLNEALKASN LTYIKVTTPH AFTISYNRNT PSESRFTNDQ KDIFTKILEF HRQAKSPFMI
201: NAYTFFTMDT NNVNYAIFGP SNAITDTNTQ QTYTNMFDAV MDATYSAMKA LGYGDVDIAV GETGWPTACD ASWCSPQNAE NYNLNIIKRA QVIGTPLMPN
301: RHIDIFIFAL FNEDGKPGPT RERNWGIFKP DFSPMYDVGV LKGGGSPLPF PPINNNGKWC VGKPEATLMQ LQANIDWVCS HGIDCTPISP GGICFDNNNM
401: TTRSSFIMNA YYQSKGCVDV VCDFSGTGIV TSTNPSTSTC PIPIGEGGGG NGAKSKSANW CMAKQEATET QLQANIDWVC SQGIDCKPIS PGGICFDNNN
501: MKTRSTFIMN AYYESKGYSK DACDFRGSGI VTTTNPSTST CVVPASVTL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.