Factsheet for Solyc07g005330.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 7
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

extracellular: 22364583
nucleus: 28394025
extracellular: 28847647
extracellular: 29876421

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

msms PMID: 28847647 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan; Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA. Electronic address: jabadia@eead.csic.es.

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

msms PMID: 22364583 doi

P Shah, AL Powell, R Orlando, C Bergmann, G Gutierrez-Sanchez

Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400008245	Potato	vacuole	95.86	95.24
Solyc05g054440.2.1	Tomato	unclear	69.72	60.84
VIT_13s0019g01180.t01	Wine grape	extracellular, vacuole	55.99	57.49
KRH01668	Soybean	extracellular	53.38	53.73
Bra007162.1-P	Field mustard	extracellular	51.63	52.67
CDY40219	Canola	extracellular	51.63	52.67
CDY62387	Canola	extracellular	51.42	52.56
CDY53692	Canola	extracellular	51.42	52.56
AT3G55430.1	Thale cress	extracellular	51.2	52.34
Solyc06g076170.2.1	Tomato	extracellular	51.2	52.34
Bra003212.1-P	Field mustard	extracellular	51.2	52.34
CDY40218	Canola	extracellular	51.42	52.1
CDY41234	Canola	extracellular	51.63	52.09
Bra007161.1-P	Field mustard	extracellular	51.2	51.88
CDY41232	Canola	extracellular	50.76	51.66
CDY02936	Canola	extracellular	50.33	51.11
CDX76097	Canola	extracellular	50.11	51.0
Bra014747.1-P	Field mustard	extracellular	49.89	50.78
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular, vacuole	49.46	49.13
GSMUA_Achr6P05040_001	Banana	extracellular, vacuole	44.66	47.67
GSMUA_Achr11P...	Banana	plasma membrane, vacuole	42.05	47.54
Os11t0704600-01	Rice	extracellular	48.58	47.25
EES10308	Sorghum	endoplasmic reticulum, extracellular, vacuole	47.28	46.47
Solyc03g082900.2.1	Tomato	extracellular	38.13	46.3
TraesCS4B01G142000.1	Wheat	golgi	46.19	45.89
TraesCS4D01G136800.1	Wheat	cytosol, extracellular, plastid, vacuole	44.66	45.66
Zm00001d004768_P001	Maize	extracellular	45.1	45.59
TraesCS4A01G175900.1	Wheat	extracellular	45.53	45.34
TraesCS5D01G335600.1	Wheat	vacuole	38.34	44.78
TraesCSU01G239400.1	Wheat	extracellular, vacuole	38.13	44.53
TraesCSU01G204400.1	Wheat	extracellular, vacuole	38.13	44.53
TraesCS5A01G329700.1	Wheat	vacuole	37.91	44.27
Bra005028.1-P	Field mustard	extracellular	42.27	43.3
CDY20461	Canola	extracellular	42.05	42.89
CDY53600	Canola	extracellular	41.83	42.67
HORVU4Hr1G027740.1	Barley	vacuole	45.97	42.28
TraesCS5D01G335500.1	Wheat	golgi, plasma membrane, vacuole	40.3	39.19
Solyc01g109570.2.1	Tomato	extracellular	39.87	38.69
TraesCS5A01G329600.1	Wheat	extracellular, plasma membrane, vacuole	39.65	37.76
TraesCS5B01G329800.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, vacuole	40.3	37.76
Zm00001d019248_P001	Maize	extracellular, vacuole	40.52	37.35
Solyc07g049370.2.1	Tomato	extracellular, vacuole	37.91	37.18
Solyc12g040860.1.1	Tomato	extracellular, plasma membrane, vacuole	36.82	37.06
Os07t0240200-01	Rice	endoplasmic reticulum, extracellular, plasma membrane	40.3	36.93
HORVU5Hr1G083710.1	Barley	golgi, mitochondrion, vacuole	40.3	36.78
Solyc12g014420.1.1	Tomato	extracellular	38.13	36.46
Solyc11g068440.1.1	Tomato	extracellular	30.07	36.32
KXG34744	Sorghum	vacuole	39.43	35.77
Solyc02g070450.1.1	Tomato	endoplasmic reticulum, extracellular, vacuole	30.72	35.34
AT2G39640.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	42.05	35.15
Solyc09g057630.2.1	Tomato	nucleus	34.64	34.27
Solyc12g008580.1.1	Tomato	extracellular	36.82	34.07
Solyc08g083310.2.1	Tomato	nucleus	29.85	32.39
Solyc04g080260.2.1	Tomato	extracellular	30.94	32.2
Solyc11g071520.1.1	Tomato	extracellular	26.8	32.11
Solyc12g098560.1.1	Tomato	extracellular	31.81	31.81
Solyc12g055840.1.1	Tomato	nucleus	28.98	31.52
Solyc04g007910.2.1	Tomato	extracellular	33.99	30.89
Solyc07g008150.2.1	Tomato	extracellular, vacuole	25.93	30.51
Solyc08g005000.2.1	Tomato	extracellular	28.98	30.37
Solyc06g073710.2.1	Tomato	golgi, mitochondrion, plastid, vacuole	26.14	29.13
Solyc02g080660.2.1	Tomato	golgi, plasma membrane, vacuole	24.62	27.36

Protein Annotations

KEGG:00500+3.2.1.39	Gene3D:3.20.20.80	MapMan:50.3.2	UniProt:B5M9E5	EMBL:FJ151172	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016787	GO:GO:0016798
GO:GO:0030246	GO:GO:0030247	GO:GO:0046658	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	PFAM:PF00332
PFAM:PF07983	ScanProsite:PS00587	PANTHER:PTHR32227	PANTHER:PTHR32227:SF62	SMART:SM00768	SUPFAM:SSF51445
SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc07g005330.2	EnsemblPlants:Solyc07g005330.2.1	TMHMM:TMhelix	UniParc:UPI00017FB91C	InterPro:X8
SEG:seg	:	:	:	:	:

Description

Beta-glucosidase 08 [Source:UniProtKB/TrEMBL;Acc:B5M9E5]

Coordinates

chr7:-:261349..264657

Molecular Weight (calculated)

50924.2 Da

IEP (calculated)

9.239

GRAVY (calculated)

-0.250

Length

459 amino acids

Sequence
(BLAST)

001: MISKTSFVLF LIAIALFLHD VTSIGVNYGT LGNNLPPPAQ VAQFIKDKTV IDRVKIFDIN PDILRAFANT GISLTVTVPN GEIPNLLDLA YARRYVEQNI
101: KPHYPQTKMD VILVGNEVLH WDTPEVQNKL VPAMKVFYQA LGLSGLKGIK VSSAHSLGIL LRSNPPSAAR FRPGWDVGIL APMLQFLRET KGPFMVNPYP
201: YFGYNKKQED FLLFRKNKGV YDRFSKKWYT NSFDMLLDAV YMSMVRLKHS DVEIVAAETG WPSQGEAYEP QCTVENAASY NGGLMKKYNS GIGTPLMPHR
301: KIETYIFSLF NENTKPGSIA ERNFGLFRPD FTPVYDVGVL KSNQAHPTPS LPPPKTGGGG NKGQPKTPAE NKKFCMPKVE ATDAQLQSNI NYVCSQGVDC
401: TPIQVGGSCF KPNTIRSHAA FAMNSYYQKE GRNNFNCDFA GTGVVAFSDP SYGTCKFES

Best Arabidopsis Sequence Match ( AT3G55430.1 )
(BLAST)

001: MAKAPPSISL LLLLCAAVFL TIPAVISAIG VNYGTLGNLP PPTQVANFIK TQTSIDSVKI FDVNPDILRA FAGTGISVVV TVPNGDIPAL ANGRQARRWV
101: SVNILPFHPQ TKIKYISVGN EILLTGDNNM INNLLPAMRN LNNALVRAGV RDVKVTTAHS LNIIAYDLTG APSSGRFRPG WDKGILAPIL AYHRRTKSPF
201: MVNPYPYFGF DPKNVNFAIF RTPYKAVRDP FTRHVYTNMF DALMDSTYSA MKALGYGDVN IVVGETGWPS ACDAPWCSPA NAAWFNLNII KRAQGQGTPL
301: MPNRRFETYI FGLFNEEGKP GPTAERNWGL FRADFSPVYD VGLLRNGQGG GGRPALPAPS TAGGKWCVAR SGATNTQLQD SINWVCGQGV DCKPIQAGGS
401: CFNPSSLRTH ASFVMNAYFQ SHGRTDGACN FSGTGMIVGN NPSNGACKY

Arabidopsis Description

Beta-1, 3-glucanase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M2T6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.