Factsheet for TraesCS4A01G175900.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G142000.1	Wheat	golgi	98.92	98.7
TraesCS4D01G136800.1	Wheat	cytosol, extracellular, plastid, vacuole	95.23	97.77
HORVU4Hr1G027740.1	Barley	vacuole	95.88	88.58
Os11t0704600-01	Rice	extracellular	82.0	80.08
EES10308	Sorghum	endoplasmic reticulum, extracellular, vacuole	73.32	72.38
Zm00001d004768_P001	Maize	extracellular	71.15	72.25
VIT_13s0019g01180.t01	Wine grape	extracellular, vacuole	50.11	51.68
KRH01668	Soybean	extracellular	50.54	51.1
AT3G55430.1	Thale cress	extracellular	49.24	50.56
CDY62387	Canola	extracellular	49.02	50.33
CDY02936	Canola	extracellular	49.24	50.22
CDX76097	Canola	extracellular	49.02	50.11
Bra014747.1-P	Field mustard	extracellular	48.81	49.89
CDY53692	Canola	extracellular	48.59	49.89
CDY40218	Canola	extracellular	48.81	49.67
Bra007161.1-P	Field mustard	extracellular	48.81	49.67
Bra003212.1-P	Field mustard	extracellular	48.37	49.67
CDY41234	Canola	extracellular	48.81	49.45
CDY40219	Canola	extracellular	47.94	49.11
Bra007162.1-P	Field mustard	extracellular	47.51	48.67
CDY41232	Canola	extracellular	47.51	48.56
TraesCS5A01G329700.1	Wheat	vacuole	39.05	45.8
Solyc07g005330.2.1	Tomato	extracellular	45.34	45.53
PGSC0003DMT400008245	Potato	vacuole	45.34	45.24
TraesCS2A01G439500.1	Wheat	extracellular	44.03	44.13
CDY20461	Canola	extracellular	42.73	43.78
Bra005028.1-P	Field mustard	extracellular	42.52	43.75
CDY53600	Canola	extracellular	42.52	43.56
TraesCS4A01G293500.1	Wheat	plasma membrane	42.08	41.45
PGSC0003DMT400060499	Potato	extracellular	44.69	40.87
Solyc05g054440.2.1	Tomato	unclear	45.77	40.11
TraesCS5A01G329600.1	Wheat	extracellular, plasma membrane, vacuole	41.21	39.42
TraesCS2A01G294700.1	Wheat	plasma membrane	32.32	38.21
TraesCS3A01G249500.1	Wheat	vacuole	32.1	37.56
TraesCS1A01G055900.1	Wheat	extracellular	22.99	36.68
TraesCS1A01G049800.1	Wheat	extracellular, vacuole	32.1	36.45
TraesCS6A01G325300.1	Wheat	cytosol, extracellular, vacuole	36.44	36.13
TraesCS7A01G069700.1	Wheat	extracellular, vacuole	33.41	35.9
TraesCS4A01G260900.2	Wheat	extracellular, plasma membrane, vacuole	32.54	35.89
TraesCS4A01G077800.1	Wheat	vacuole	33.41	35.4
AT2G39640.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	41.87	35.15
TraesCS4A01G067900.1	Wheat	vacuole	31.02	34.21
TraesCS7A01G256800.1	Wheat	vacuole	36.66	34.21
TraesCS1A01G276200.1	Wheat	vacuole	29.93	33.66
TraesCS3A01G277100.2	Wheat	vacuole	36.01	33.6
TraesCS3A01G374000.2	Wheat	endoplasmic reticulum, extracellular	29.72	33.58
TraesCS7A01G349200.1	Wheat	endoplasmic reticulum, extracellular	29.28	33.33
TraesCS5A01G338400.3	Wheat	endoplasmic reticulum, extracellular, vacuole	35.14	32.86
TraesCS7A01G378100.1	Wheat	golgi, vacuole	28.42	32.83
TraesCS1A01G046000.1	Wheat	extracellular, vacuole	24.95	31.68
TraesCS5A01G390600.1	Wheat	extracellular	32.97	30.77
TraesCS1A01G422900.1	Wheat	extracellular, vacuole	36.23	29.93
TraesCS5A01G155600.1	Wheat	plasma membrane	31.45	29.18
TraesCS1A01G422500.1	Wheat	vacuole	36.01	29.12
TraesCS2A01G186900.1	Wheat	extracellular, plasma membrane, vacuole	31.02	29.01
TraesCS6A01G164100.1	Wheat	plastid	27.55	29.0
TraesCS2A01G216200.1	Wheat	extracellular, vacuole	33.84	28.31
TraesCS4A01G064900.2	Wheat	extracellular, plasma membrane, vacuole	31.45	27.46
TraesCS2A01G224900.1	Wheat	plasma membrane, vacuole	30.59	26.5

Protein Annotations

KEGG:00500+3.2.1.39	Gene3D:1.20.58.1040	Gene3D:3.20.20.80	MapMan:50.3.2	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_17
InterPro:Glycoside_hydrolase_SF	PFAM:PF00332	PFAM:PF07983	ScanProsite:PS00587	PANTHER:PTHR32227	PANTHER:PTHR32227:SF62
SMART:SM00768	SUPFAM:SSF51445	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS4A01G175900	EnsemblPlants:TraesCS4A01G175900.1	InterPro:X8
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr4A:-:446948485..446951708

Molecular Weight (calculated)

48876.1 Da

IEP (calculated)

6.245

GRAVY (calculated)

-0.059

Length

461 amino acids

Sequence
(BLAST)

001: MPLLILLMLL AAGAAGAESA TPSLHIGVNY GANADNLPSP TSVATFLATK TTIDRVKLFD ANPTFISAFA GTPISLAVSL PNSALPALAD KATGLDAARS
101: WIRANLSPYV PATNVTLLLA GNEILLSTDT NLILSLLPAM RRLAQALKAE GLTGVRVTTP HYLGILAPSD GIPSNASFRA GYNTKLFPAM LQFHRDTGSP
201: FMVNPYPYFS YRPETLNYAL FRPNSGIYDP ATKLNYTSML DAQMDAIYTA MKKLGYGDVD IAVGEAGWPT QAEPGQIGVG VQEARDFNEG MIRVCSSGKG
301: TPLMPNRTFE TYLFSLFDEN QKPGPIAERH FGLFNPDFTP VYDLGLLRDG ASVAPTPSPN PSPNPSPKPA PSGGGKWCVA KDGANGTDLQ NNINYACGFV
401: DCKPIQSGGA CFSPNSLQAH ASYVMNAYYQ ANGHTDLACD FKGTGIVTSS DPSYGGCKYV S

Best Arabidopsis Sequence Match ( AT5G24318.1 )
(BLAST)

001: MNYVLPFFSL SMFTIVGVLL ILSTGSEASI GVNYGTLANN LPPPQQVAEF LLHSTVINRI RLFDTDPQIL QAFANTGIAV TVTVPNDQIP HLTNLSSAKQ
101: WISDHIQPHF PSTNIIRILV GNEVISTADH LLIRTLIPAM QSLHTALVSA SLHRRIQIST PHSLGTLTNS TPPSSAKFRR GYDAQVLKPL LSFLRSTSSP
201: FVVNPYPFFG YSIETLDFAL FRPNPGLFDQ HTKLLYTNML DAQLDSVYSA MDKLGFSDVE IVIGEIGWPS EGDIDQIGVD VDTAAEFNKN LIARVDSGTG
301: TPLMPNRTFE TYIFALFNEN LKSGPTSERN FGIFRSDLTP IYDIGILRPT FRSSDPVYNP RSPVRGSSSK RWCVTKAGAE TVALQRNIDY VCGLGLDCRP
401: INEGGLCYLP NTVKAHSKYA MNLYYQTMEK HEFDCDFDNT GEITTIDPSY GNCEYQAN

Arabidopsis Description

O-Glycosyl hydrolases family 17 protein [Source:UniProtKB/TrEMBL;Acc:F4KH28]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.