Factsheet for TraesCS4D01G136800.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol, vacuole, plastid

Predictor Summary:

plastid 2
vacuole 1
mitochondrion 1
cytosol 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G142000.1	Wheat	golgi	98.22	95.45
TraesCS4A01G175900.1	Wheat	extracellular	97.77	95.23
HORVU4Hr1G027740.1	Barley	vacuole	95.32	85.77
Os11t0704600-01	Rice	extracellular	81.96	77.97
Zm00001d004768_P001	Maize	extracellular	72.38	71.59
EES10308	Sorghum	endoplasmic reticulum, extracellular, vacuole	73.27	70.45
VIT_13s0019g01180.t01	Wine grape	extracellular, vacuole	51.0	51.23
KRH01668	Soybean	extracellular	50.78	50.0
CDY62387	Canola	extracellular	49.89	49.89
CDY53692	Canola	extracellular	49.67	49.67
Bra003212.1-P	Field mustard	extracellular	49.44	49.44
AT3G55430.1	Thale cress	extracellular	49.22	49.22
CDY02936	Canola	extracellular	49.22	48.89
CDY40219	Canola	extracellular	49.0	48.89
CDY41234	Canola	extracellular	49.44	48.79
CDX76097	Canola	extracellular	49.0	48.78
CDY40218	Canola	extracellular	49.0	48.57
Bra007161.1-P	Field mustard	extracellular	49.0	48.57
Bra014747.1-P	Field mustard	extracellular	48.78	48.56
Bra007162.1-P	Field mustard	extracellular	48.55	48.44
CDY41232	Canola	extracellular	48.55	48.34
TraesCS5D01G335600.1	Wheat	vacuole	40.31	46.06
Solyc07g005330.2.1	Tomato	extracellular	45.66	44.66
PGSC0003DMT400008245	Potato	vacuole	45.66	44.37
TraesCS2D01G436800.1	Wheat	vacuole	38.75	44.16
CDY20461	Canola	extracellular	42.76	42.67
Bra005028.1-P	Field mustard	extracellular	42.54	42.63
CDY53600	Canola	extracellular	42.54	42.44
TraesCS5D01G335500.1	Wheat	golgi, plasma membrane, vacuole	42.32	40.25
PGSC0003DMT400060499	Potato	extracellular	44.77	39.88
TraesCS4D01G018300.1	Wheat	plasma membrane, vacuole	41.43	39.49
Solyc05g054440.2.1	Tomato	unclear	45.88	39.16
TraesCS2D01G292500.1	Wheat	extracellular, plasma membrane, vacuole	32.52	37.44
TraesCS7D01G065400.1	Wheat	extracellular, vacuole	34.97	36.6
TraesCS1D01G056500.1	Wheat	extracellular, vacuole	32.96	36.54
TraesCS7D01G257600.1	Wheat	extracellular, vacuole	37.42	35.74
TraesCS6D01G305000.1	Wheat	extracellular	37.42	35.07
TraesCS4D01G053700.1	Wheat	vacuole	32.74	34.75
TraesCS4D01G235000.1	Wheat	plasma membrane, vacuole	33.63	34.47
TraesCS3D01G366700.2	Wheat	endoplasmic reticulum, vacuole	30.96	34.32
AT2G39640.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	41.87	34.24
TraesCS1D01G275700.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	30.96	34.15
TraesCS3D01G249500.1	Wheat	vacuole	32.07	33.49
TraesCS4D01G225700.1	Wheat	vacuole	30.96	33.25
TraesCS7D01G329400.1	Wheat	endoplasmic reticulum, extracellular	29.84	33.09
TraesCS3D01G277300.4	Wheat	vacuole	36.3	30.75
TraesCS5D01G400400.1	Wheat	extracellular	33.18	30.16
TraesCS6D01G148900.1	Wheat	plastid	28.73	29.12
TraesCS1D01G430700.1	Wheat	extracellular, vacuole	35.86	28.6
TraesCS1D01G431300.1	Wheat	vacuole	36.53	28.57
TraesCS7D01G374900.1	Wheat	plastid, vacuole	28.06	28.51
TraesCS4D01G241900.1	Wheat	extracellular	31.18	28.0
TraesCS2D01G201000.1	Wheat	extracellular, plasma membrane, vacuole	30.73	27.99
TraesCS1D01G431200.1	Wheat	extracellular, vacuole	34.74	27.96
TraesCS2D01G221800.1	Wheat	extracellular, vacuole	33.41	27.27
TraesCS5D01G160700.1	Wheat	plasma membrane	31.18	26.77
TraesCS2D01G230900.1	Wheat	plasma membrane	30.73	25.94
TraesCS2D01G200900.1	Wheat	plastid	0.0	0.0

Protein Annotations

KEGG:00500+3.2.1.39	Gene3D:1.20.58.1040	Gene3D:3.20.20.80	MapMan:50.3.2	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_17
InterPro:Glycoside_hydrolase_SF	PFAM:PF00332	PFAM:PF07983	ScanProsite:PS00587	PANTHER:PTHR32227	PANTHER:PTHR32227:SF62
SMART:SM00768	SUPFAM:SSF51445	EnsemblPlantsGene:TraesCS4D01G136800	EnsemblPlants:TraesCS4D01G136800.1	InterPro:X8	SEG:seg

Description

No Description!

Coordinates

chr4D:+:122757149..122760988

Molecular Weight (calculated)

47482.2 Da

IEP (calculated)

6.246

GRAVY (calculated)

-0.109

Length

449 amino acids

Sequence
(BLAST)

001: MLLAAGAAGA ESATPSLHIG VNYGANADNL PSPTSVAAFL ATKTTIDRVK LFDANPTFIS AFAGTPVSLA VSLPNSALPA LADKATGLDA ARSWIRANLS
101: PYVPATNVTL LLAGNEILLS TDTNLILSLL PAMRRLAQAL KAEGLTGVRV TTPHYLGILA PSDGIPSNAS FRAGYNTKLF PAMLQFHRDT GSPFMVNPYP
201: YFSYRPETLN YALFRPNSGI YDPATKLNYT SMLDAQMDAI YTAMKKLGYG DVDIAVGEAG WPTQAEPGQI GVGVQEARDF NEGMIRVCSS GKGTPLMPNR
301: TFETYLFSLF DENQKPGPIA ERHFGLFNPD FTPVYDLGLL RDGASVAPNP SPSPSPNPSP KPSPSGGGKW CVAKDGANGT DLQNNINYAC GFVDCKPIQG
401: GGACFSPNSL QSHASYVMNA YYQANGHTDL ACDFKGTGVV TSSDPSKSI

Best Arabidopsis Sequence Match ( AT3G55430.1 )
(BLAST)

001: MAKAPPSISL LLLLCAAVFL TIPAVISAIG VNYGTLGNLP PPTQVANFIK TQTSIDSVKI FDVNPDILRA FAGTGISVVV TVPNGDIPAL ANGRQARRWV
101: SVNILPFHPQ TKIKYISVGN EILLTGDNNM INNLLPAMRN LNNALVRAGV RDVKVTTAHS LNIIAYDLTG APSSGRFRPG WDKGILAPIL AYHRRTKSPF
201: MVNPYPYFGF DPKNVNFAIF RTPYKAVRDP FTRHVYTNMF DALMDSTYSA MKALGYGDVN IVVGETGWPS ACDAPWCSPA NAAWFNLNII KRAQGQGTPL
301: MPNRRFETYI FGLFNEEGKP GPTAERNWGL FRADFSPVYD VGLLRNGQGG GGRPALPAPS TAGGKWCVAR SGATNTQLQD SINWVCGQGV DCKPIQAGGS
401: CFNPSSLRTH ASFVMNAYFQ SHGRTDGACN FSGTGMIVGN NPSNGACKY

Arabidopsis Description

Beta-1, 3-glucanase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M2T6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.