Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- vacuole 2
- extracellular 1
- endoplasmic reticulum 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G155600.1 | Wheat | plasma membrane | 93.69 | 98.59 |
| TraesCS5B01G153900.1 | Wheat | plasma membrane | 93.12 | 97.99 |
| HORVU5Hr1G048630.2 | Barley | plasma membrane, vacuole | 90.06 | 94.96 |
| TraesCS2D01G201000.1 | Wheat | extracellular, plasma membrane, vacuole | 81.45 | 86.41 |
| Os07t0577300-01 | Rice | extracellular | 77.25 | 81.12 |
| OQU90151 | Sorghum | vacuole | 75.91 | 80.36 |
| Zm00001d006658_P005 | Maize | extracellular, plasma membrane, vacuole | 74.57 | 79.27 |
| Zm00001d021903_P001 | Maize | extracellular, plasma membrane, vacuole | 73.81 | 77.2 |
| GSMUA_Achr2P17770_001 | Banana | plasma membrane, vacuole | 49.52 | 65.08 |
| GSMUA_Achr8P15370_001 | Banana | extracellular, plasma membrane, vacuole | 61.95 | 62.43 |
| GSMUA_Achr6P29690_001 | Banana | extracellular, plasma membrane, vacuole | 61.19 | 61.07 |
| KRH58918 | Soybean | endoplasmic reticulum | 51.43 | 54.23 |
| KRH42823 | Soybean | extracellular, plasma membrane, vacuole | 51.05 | 53.83 |
| KRH16072 | Soybean | extracellular, plasma membrane, vacuole | 50.29 | 52.49 |
| VIT_06s0004g00720.t01 | Wine grape | extracellular, vacuole | 47.42 | 52.43 |
| KRH05027 | Soybean | extracellular, plasma membrane, vacuole | 49.52 | 52.01 |
| PGSC0003DMT400081837 | Potato | extracellular | 47.99 | 50.4 |
| AT3G13560.4 | Thale cress | plasma membrane | 48.18 | 49.9 |
| Bra027421.1-P | Field mustard | extracellular, plasma membrane, vacuole | 45.32 | 47.31 |
| CDY59252 | Canola | extracellular, plasma membrane, vacuole | 36.14 | 46.32 |
| CDY23618 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 36.9 | 45.84 |
| TraesCS4D01G241900.1 | Wheat | extracellular | 42.26 | 44.2 |
| TraesCS2D01G230900.1 | Wheat | plasma membrane | 38.43 | 37.78 |
| TraesCS6D01G305000.1 | Wheat | extracellular | 33.08 | 36.12 |
| TraesCS2D01G436800.1 | Wheat | vacuole | 26.39 | 35.03 |
| TraesCS3D01G277300.4 | Wheat | vacuole | 33.84 | 33.4 |
| TraesCS3D01G366700.2 | Wheat | endoplasmic reticulum, vacuole | 24.47 | 31.6 |
| TraesCS4D01G018300.1 | Wheat | plasma membrane, vacuole | 28.3 | 31.42 |
| TraesCS4D01G136800.1 | Wheat | cytosol, extracellular, plastid, vacuole | 26.77 | 31.18 |
| TraesCS7D01G257600.1 | Wheat | extracellular, vacuole | 27.92 | 31.06 |
| TraesCS7D01G329400.1 | Wheat | endoplasmic reticulum, extracellular | 22.94 | 29.63 |
| TraesCS1D01G275700.1 | Wheat | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 22.56 | 28.99 |
| TraesCS4D01G053700.1 | Wheat | vacuole | 23.33 | 28.84 |
| TraesCS5D01G335600.1 | Wheat | vacuole | 21.41 | 28.5 |
| TraesCS7D01G065400.1 | Wheat | extracellular, vacuole | 23.33 | 28.44 |
| TraesCS1D01G056500.1 | Wheat | extracellular, vacuole | 21.99 | 28.4 |
| TraesCS2D01G292500.1 | Wheat | extracellular, plasma membrane, vacuole | 21.03 | 28.21 |
| TraesCS4D01G235000.1 | Wheat | plasma membrane, vacuole | 23.52 | 28.08 |
| TraesCS4D01G225700.1 | Wheat | vacuole | 21.99 | 27.51 |
| TraesCS5D01G400400.1 | Wheat | extracellular | 25.81 | 27.33 |
| TraesCS2D01G221800.1 | Wheat | extracellular, vacuole | 28.68 | 27.27 |
| TraesCS1D01G431200.1 | Wheat | extracellular, vacuole | 28.68 | 26.88 |
| TraesCS1D01G431300.1 | Wheat | vacuole | 28.87 | 26.31 |
| TraesCS7D01G374900.1 | Wheat | plastid, vacuole | 22.18 | 26.24 |
| TraesCS3D01G249500.1 | Wheat | vacuole | 21.41 | 26.05 |
| TraesCS6D01G148900.1 | Wheat | plastid | 21.99 | 25.96 |
| TraesCS1D01G430700.1 | Wheat | extracellular, vacuole | 27.92 | 25.93 |
| TraesCS5D01G335500.1 | Wheat | golgi, plasma membrane, vacuole | 22.75 | 25.21 |
| TraesCS2D01G200900.1 | Wheat | plastid | 1.72 | 4.69 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G160700.1 | EnsemblPlantsGene:TraesCS5D01G160700 | Gene3D:3.20.20.80 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 |
| GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | InterPro:Glyco_hydro_17 | InterPro:Glycoside_hydrolase_SF |
| InterPro:X8 | KEGG:00500+3.2.1.39 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF232 | PFAM:PF00332 | PFAM:PF07983 |
| SEG:seg | SMART:SM00768 | SUPFAM:SSF51445 | TMHMM:TMhelix | MapMan:50.3.2 | : |
Description
No Description!
Coordinates
chr5D:+:250416016..250419260
Molecular Weight (calculated)
56617.2 Da
IEP (calculated)
5.807
GRAVY (calculated)
0.038
Length
523 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRFSSFFQL RFDQEFVRSS WIITDQMLGR NNMSPNRLEV VLMLLMLMVY NASGAFVGIN IGTNVSDLPS ASDIVSILKA KKIQHVRLVD SNHEMLVALA
101: NTGIEVMVGV PNNELLRVGQ SRPTAADWIN KNVAAYIPAT NITYIAVGDE ILTTVPNAAL VLVPALQFLQ SALLAANLNT QVKLSSPHSM DMISKAFPPS
201: TATFNSTWSS IMLQYLGFLK KTGSSFMLNA QPYYGYVKGQ GVFPLEYALF RSLNPNSQIA DPNTNLFYTN MFDAMVDATY NSMKAMNFTD IPVMVTASGW
301: PWHGARKEPA ADVDNALAYN TNLIRHVLNN SGTPSQRNNQ VSTYLFELFS EDLRSGSVSG ESWGIMFSNA SAVYSLTFED VATASTDSPA LHGMFCVANS
401: SAPHSALKQS LDWACGPGSA NCSAIQPGQP CYKPDDIVAV ASYAFNDYYH RTQASGGTCN FNSTATISST DPSHGSCKFA GSTGANGSGM ASGPVSQDSS
501: ASQSQSFWLT WLIAMLLPVL LLM
101: NTGIEVMVGV PNNELLRVGQ SRPTAADWIN KNVAAYIPAT NITYIAVGDE ILTTVPNAAL VLVPALQFLQ SALLAANLNT QVKLSSPHSM DMISKAFPPS
201: TATFNSTWSS IMLQYLGFLK KTGSSFMLNA QPYYGYVKGQ GVFPLEYALF RSLNPNSQIA DPNTNLFYTN MFDAMVDATY NSMKAMNFTD IPVMVTASGW
301: PWHGARKEPA ADVDNALAYN TNLIRHVLNN SGTPSQRNNQ VSTYLFELFS EDLRSGSVSG ESWGIMFSNA SAVYSLTFED VATASTDSPA LHGMFCVANS
401: SAPHSALKQS LDWACGPGSA NCSAIQPGQP CYKPDDIVAV ASYAFNDYYH RTQASGGTCN FNSTATISST DPSHGSCKFA GSTGANGSGM ASGPVSQDSS
501: ASQSQSFWLT WLIAMLLPVL LLM
001: MLLPRWFAEA LLLLLSILAC SNAAFIGVNI GTDLTNMPPP SDIVTLLKSQ QITHVRLYDA NSHMLKAFAN TSIEVMVGVT NEEILKIGRF PSAAAAWVNK
101: NVAAYIPSTN ITAIAVGSEV LTTIPHVAPI LASALNNIHK ALVASNLNFK VKVSSPMSMD IMPKPFPPST STFSPSWNTT VYQLLQFLKN TGSFFMLNAY
201: PYYGYTTANG IFPLDYALFK QLSPVKQIVD PNTLLHYNSM FDAMVDAAYY SMEALNFSKI PVVVTETGWP SSGGSDEAAA TVANAETFNT NLIKRVLNNS
301: GPPSQPDIPI NTYIYELYNE DKRSGPVSER NWGILFPNGT SVYPLSLSGG SSSAALNGSS MFCVAKADAD DDKLVDGLNW ACGQGRANCA AIQPGQPCYL
401: PNDVKSHASF AFNDYYQKMK SAGGTCDFDG TAITTTRDPS YRTCAYTGSL NANATNGNFP PDALGPASPL GGNANARIIF SYHLPILAPL ALTLLQLLLQ
501: HDRLL
101: NVAAYIPSTN ITAIAVGSEV LTTIPHVAPI LASALNNIHK ALVASNLNFK VKVSSPMSMD IMPKPFPPST STFSPSWNTT VYQLLQFLKN TGSFFMLNAY
201: PYYGYTTANG IFPLDYALFK QLSPVKQIVD PNTLLHYNSM FDAMVDAAYY SMEALNFSKI PVVVTETGWP SSGGSDEAAA TVANAETFNT NLIKRVLNNS
301: GPPSQPDIPI NTYIYELYNE DKRSGPVSER NWGILFPNGT SVYPLSLSGG SSSAALNGSS MFCVAKADAD DDKLVDGLNW ACGQGRANCA AIQPGQPCYL
401: PNDVKSHASF AFNDYYQKMK SAGGTCDFDG TAITTTRDPS YRTCAYTGSL NANATNGNFP PDALGPASPL GGNANARIIF SYHLPILAPL ALTLLQLLLQ
501: HDRLL
Arabidopsis Description
Glucan endo-1,3-beta-glucosidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q94CD8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.