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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY59252 Canola extracellular, plasma membrane, vacuole 88.36 91.18
AT3G13560.4 Thale cress plasma membrane 82.66 68.91
PGSC0003DMT400081837 Potato extracellular 58.43 49.4
KRH42823 Soybean extracellular, plasma membrane, vacuole 57.96 49.19
KRH58918 Soybean endoplasmic reticulum 57.48 48.79
KRH05027 Soybean extracellular, plasma membrane, vacuole 57.48 48.59
VIT_06s0004g00720.t01 Wine grape extracellular, vacuole 54.39 48.41
KRH16072 Soybean extracellular, plasma membrane, vacuole 56.29 47.31
GSMUA_Achr2P17770_001 Banana plasma membrane, vacuole 43.47 45.98
GSMUA_Achr8P15370_001 Banana extracellular, plasma membrane, vacuole 49.17 39.88
HORVU5Hr1G048630.2 Barley plasma membrane, vacuole 46.32 39.31
GSMUA_Achr6P29690_001 Banana extracellular, plasma membrane, vacuole 48.93 39.31
OQU90151 Sorghum vacuole 45.84 39.07
HORVU2Hr1G036980.5 Barley plasma membrane 45.37 38.82
Os07t0577300-01 Rice extracellular 45.84 38.76
TraesCS2A01G186900.1 Wheat extracellular, plasma membrane, vacuole 45.37 38.74
TraesCS2D01G201000.1 Wheat extracellular, plasma membrane, vacuole 45.37 38.74
TraesCS2B01G220300.1 Wheat plasma membrane 45.13 38.54
Zm00001d006658_P005 Maize extracellular, plasma membrane, vacuole 44.89 38.41
TraesCS5A01G155600.1 Wheat plasma membrane 45.13 38.23
TraesCS5B01G153900.1 Wheat plasma membrane 45.13 38.23
Zm00001d021903_P001 Maize extracellular, plasma membrane, vacuole 44.66 37.6
CDY09427 Canola extracellular 43.94 37.22
CDY48807 Canola extracellular 43.71 37.02
TraesCS5D01G160700.1 Wheat plasma membrane 45.84 36.9
CDY16440 Canola extracellular 41.33 34.52
CDY58676 Canola extracellular, vacuole 40.62 33.93
CDY21013 Canola extracellular 40.62 32.95
CDY18049 Canola extracellular, vacuole 34.44 32.81
CDY56498 Canola extracellular, vacuole 34.44 32.81
CDY31214 Canola vacuole 40.14 32.38
CDY46679 Canola extracellular, vacuole 32.07 30.27
CDX92794 Canola endoplasmic reticulum, extracellular 32.3 30.16
CDX75437 Canola extracellular, plasma membrane, vacuole 36.1 30.04
CDX69064 Canola extracellular, plasma membrane, vacuole 35.87 29.9
CDY17308 Canola extracellular, vacuole 31.83 29.84
CDY20780 Canola extracellular, vacuole 31.59 29.62
CDY19908 Canola extracellular, vacuole 32.07 29.41
CDY06601 Canola endoplasmic reticulum, extracellular 31.35 29.4
CDY12009 Canola extracellular, vacuole 31.59 28.91
CDY36734 Canola extracellular, vacuole 31.35 28.7
CDY64970 Canola extracellular, plasma membrane, vacuole 33.73 28.23
CDY32869 Canola endoplasmic reticulum, extracellular, plasma membrane 33.49 28.03
CDY06818 Canola extracellular, plasma membrane, vacuole 32.54 27.29
CDY14214 Canola endoplasmic reticulum, extracellular, vacuole 33.25 27.29
CDY37244 Canola vacuole 33.02 27.15
CDY24629 Canola vacuole 29.45 26.96
CDY45466 Canola vacuole 29.45 26.96
CDY26761 Canola vacuole 32.54 26.76
CDY28063 Canola vacuole 29.22 26.74
CDX76097 Canola extracellular 28.5 26.61
CDY02936 Canola extracellular 28.5 26.55
CDY08004 Canola vacuole 28.98 26.52
CDY62387 Canola extracellular 28.27 26.5
CDY53692 Canola extracellular 28.03 26.28
CDY62033 Canola extracellular, plasma membrane, vacuole 33.25 26.27
CDY68826 Canola cytosol, endoplasmic reticulum, peroxisome 26.37 26.18
CDY40218 Canola extracellular 28.03 26.05
CDX87130 Canola vacuole 28.74 26.02
CDX83243 Canola vacuole 23.28 25.93
CDY38531 Canola golgi, vacuole 23.52 25.92
CDY20153 Canola plasma membrane 23.99 25.83
CDY21869 Canola plasma membrane 23.99 25.83
CDY20461 Canola extracellular 27.55 25.78
CDY19838 Canola extracellular, vacuole 28.5 25.7
CDX99881 Canola extracellular, vacuole 23.04 25.66
CDY53600 Canola extracellular 27.32 25.56
CDY41234 Canola extracellular 27.55 25.49
CDY50110 Canola extracellular, vacuole 28.5 25.21
CDY53213 Canola extracellular, vacuole 28.74 25.21
CDX90405 Canola vacuole 23.75 25.19
CDY18092 Canola extracellular, vacuole 28.27 25.0
CDX90225 Canola vacuole 23.99 24.94
CDY26296 Canola extracellular, plasma membrane, vacuole 23.52 24.81
CDX78840 Canola vacuole 23.52 24.69
CDX99476 Canola vacuole 23.52 24.69
CDY01532 Canola vacuole 23.28 24.69
CDY40219 Canola extracellular 26.37 24.67
CDY41232 Canola extracellular 26.37 24.61
CDY59775 Canola extracellular, vacuole 27.55 24.47
CDY67322 Canola extracellular 12.83 24.43
CDY63754 Canola extracellular, vacuole 27.55 24.27
CDY12371 Canola extracellular, vacuole 27.32 24.01
CDY12732 Canola extracellular, vacuole 27.32 23.96
CDX93815 Canola extracellular 23.52 23.91
CDY27122 Canola extracellular, vacuole 27.08 23.8
CDY69080 Canola extracellular 23.52 23.68
CDY08310 Canola extracellular, vacuole 26.84 23.59
CDX76528 Canola extracellular, vacuole 22.09 23.48
CDY06469 Canola extracellular 26.6 23.38
CDY01191 Canola extracellular, vacuole 26.6 23.33
CDY34065 Canola extracellular, vacuole 22.09 23.02
CDY13362 Canola extracellular, vacuole 22.57 22.95
CDY22386 Canola extracellular, vacuole 23.28 22.69
CDY63842 Canola golgi, vacuole 15.44 22.57
CDX67530 Canola extracellular 22.8 22.48
CDX71547 Canola extracellular, vacuole 23.28 22.48
CDY04498 Canola extracellular, vacuole 20.19 22.02
CDX83270 Canola extracellular, vacuole 20.19 21.79
CDY31181 Canola extracellular, vacuole 20.19 21.79
CDX74052 Canola vacuole 28.03 20.81
CDY30112 Canola cytosol 20.43 20.33
CDX71449 Canola plasma membrane, vacuole 20.43 18.94
CDX97707 Canola plastid 21.85 16.76
Protein Annotations
KEGG:00500+3.2.1.39Gene3D:3.20.20.80MapMan:50.3.2GO:A0A078GG98UniProt:A0A078GG98EnsemblPlants:CDY23618
ProteinID:CDY23618ProteinID:CDY23618.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005575
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0016020GO:GO:0016021GO:GO:0016787
GO:GO:0016798EnsemblPlantsGene:GSBRNA2T00023837001InterPro:Glyco_hydro_17InterPro:Glycoside_hydrolase_SFPFAM:PF00332PFAM:PF07983
ScanProsite:PS00587PANTHER:PTHR32227PANTHER:PTHR32227:SF232SMART:SM00768SUPFAM:SSF51445TMHMM:TMhelix
UniParc:UPI0004EF3A64InterPro:X8SEG:seg:::
Description
BnaC05g39760DBnaC05g39760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GG98]
Coordinates
chrLK032145:-:416655..419299
Molecular Weight (calculated)
44711.6 Da
IEP (calculated)
6.501
GRAVY (calculated)
0.175
Length
421 amino acids
Sequence
(BLAST)
001: MTQVLNLSVF KGVMMLLPRW FLEAILLLIS ALAFTNAAFI GVNIGTDLTN MPSPSDIVSL LKSHQITHVR LYDANSHMLK AFANTTIQVT VGVTNQEILK
101: IGRFPSSAAS WINKNVAAYV PSTNITAIAV GSEVLTQSPH VAPILASALN NIHKALVAMN LNFQVKVSTP MSMDVMPKPF PPSTSTFSPS WNTTVHQILQ
201: FLDNTGSFFM LNAMFDAMVD AAYYSMVALN FSKIPVVVTE TGWPSSGGSD ETAATVSNAE TFNSNLIKRV GGGGGGSEAL NGTTLFCVAK TDADDDKLED
301: GLNWACGQGR ANCGPIQPGQ ACYLPNDIKS HASFAYNDYY QKMKGVGGTC DFDGTAITTP RDPSYRTCAY TGSLNANGTG GNFPPTALGP ASQVGGNANA
401: LIISIYHLPF LATLALTLLL L
Best Arabidopsis Sequence Match ( AT3G13560.4 )
(BLAST)
001: MLLPRWFAEA LLLLLSILAC SNAAFIGVNI GTDLTNMPPP SDIVTLLKSQ QITHVRLYDA NSHMLKAFAN TSIEVMVGVT NEEILKIGRF PSAAAAWVNK
101: NVAAYIPSTN ITAIAVGSEV LTTIPHVAPI LASALNNIHK ALVASNLNFK VKVSSPMSMD IMPKPFPPST STFSPSWNTT VYQLLQFLKN TGSFFMLNAY
201: PYYGYTTANG IFPLDYALFK QLSPVKQIVD PNTLLHYNSM FDAMVDAAYY SMEALNFSKI PVVVTETGWP SSGGSDEAAA TVANAETFNT NLIKRVLNNS
301: GPPSQPDIPI NTYIYELYNE DKRSGPVSER NWGILFPNGT SVYPLSLSGG SSSAALNGSS MFCVAKADAD DDKLVDGLNW ACGQGRANCA AIQPGQPCYL
401: PNDVKSHASF AFNDYYQKMK SAGGTCDFDG TAITTTRDPS YRTCAYTGSL NANATNGNFP PDALGPASPL GGNANARIIF SYHLPILAPL ALTLLQLLLQ
501: HDRLL
Arabidopsis Description
Glucan endo-1,3-beta-glucosidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q94CD8]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.