Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G220300.1 | Wheat | plasma membrane | 98.38 | 98.38 |
| TraesCS2A01G186900.1 | Wheat | extracellular, plasma membrane, vacuole | 97.57 | 97.57 |
| HORVU2Hr1G036980.5 | Barley | plasma membrane | 93.71 | 93.9 |
| TraesCS5D01G160700.1 | Wheat | plasma membrane | 86.41 | 81.45 |
| OQU90151 | Sorghum | vacuole | 79.92 | 79.76 |
| Os07t0577300-01 | Rice | extracellular | 80.32 | 79.52 |
| Zm00001d006658_P005 | Maize | extracellular, plasma membrane, vacuole | 78.9 | 79.06 |
| Zm00001d021903_P001 | Maize | extracellular, plasma membrane, vacuole | 78.3 | 77.2 |
| GSMUA_Achr2P17770_001 | Banana | plasma membrane, vacuole | 52.74 | 65.33 |
| GSMUA_Achr8P15370_001 | Banana | extracellular, plasma membrane, vacuole | 66.13 | 62.81 |
| GSMUA_Achr6P29690_001 | Banana | extracellular, plasma membrane, vacuole | 66.33 | 62.4 |
| KRH42823 | Soybean | extracellular, plasma membrane, vacuole | 53.75 | 53.43 |
| VIT_06s0004g00720.t01 | Wine grape | extracellular, vacuole | 50.71 | 52.85 |
| KRH58918 | Soybean | endoplasmic reticulum | 53.14 | 52.82 |
| KRH05027 | Soybean | extracellular, plasma membrane, vacuole | 51.52 | 51.0 |
| KRH16072 | Soybean | extracellular, plasma membrane, vacuole | 51.52 | 50.7 |
| PGSC0003DMT400081837 | Potato | extracellular | 50.71 | 50.2 |
| AT3G13560.4 | Thale cress | plasma membrane | 51.32 | 50.1 |
| Bra027421.1-P | Field mustard | extracellular, plasma membrane, vacuole | 48.68 | 47.9 |
| CDY59252 | Canola | extracellular, plasma membrane, vacuole | 38.13 | 46.08 |
| TraesCS4D01G241900.1 | Wheat | extracellular | 46.25 | 45.6 |
| CDY23618 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 38.74 | 45.37 |
| TraesCS2D01G230900.1 | Wheat | plasma membrane | 41.58 | 38.53 |
| TraesCS6D01G305000.1 | Wheat | extracellular | 36.71 | 37.79 |
| TraesCS2D01G436800.1 | Wheat | vacuole | 28.4 | 35.53 |
| TraesCS3D01G366700.2 | Wheat | endoplasmic reticulum, vacuole | 27.99 | 34.07 |
| TraesCS3D01G277300.4 | Wheat | vacuole | 36.31 | 33.77 |
| TraesCS4D01G018300.1 | Wheat | plasma membrane, vacuole | 30.83 | 32.27 |
| TraesCS7D01G257600.1 | Wheat | extracellular, vacuole | 30.63 | 32.13 |
| TraesCS7D01G329400.1 | Wheat | endoplasmic reticulum, extracellular | 25.76 | 31.36 |
| TraesCS1D01G056500.1 | Wheat | extracellular, vacuole | 25.56 | 31.11 |
| TraesCS4D01G136800.1 | Wheat | cytosol, extracellular, plastid, vacuole | 27.99 | 30.73 |
| TraesCS2D01G292500.1 | Wheat | extracellular, plasma membrane, vacuole | 24.14 | 30.51 |
| TraesCS1D01G275700.1 | Wheat | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 24.95 | 30.22 |
| TraesCS4D01G225700.1 | Wheat | vacuole | 25.36 | 29.9 |
| TraesCS7D01G065400.1 | Wheat | extracellular, vacuole | 25.76 | 29.6 |
| TraesCS4D01G235000.1 | Wheat | plasma membrane, vacuole | 26.17 | 29.45 |
| TraesCS4D01G053700.1 | Wheat | vacuole | 25.15 | 29.31 |
| TraesCS5D01G335600.1 | Wheat | vacuole | 23.12 | 29.01 |
| TraesCS2D01G221800.1 | Wheat | extracellular, vacuole | 31.85 | 28.55 |
| TraesCS1D01G431200.1 | Wheat | extracellular, vacuole | 32.05 | 28.32 |
| TraesCS5D01G400400.1 | Wheat | extracellular | 27.99 | 27.94 |
| TraesCS7D01G374900.1 | Wheat | plastid, vacuole | 24.75 | 27.6 |
| TraesCS1D01G431300.1 | Wheat | vacuole | 31.85 | 27.35 |
| TraesCS3D01G249500.1 | Wheat | vacuole | 23.73 | 27.21 |
| TraesCS1D01G430700.1 | Wheat | extracellular, vacuole | 30.83 | 27.0 |
| TraesCS6D01G148900.1 | Wheat | plastid | 23.53 | 26.19 |
| TraesCS5D01G335500.1 | Wheat | golgi, plasma membrane, vacuole | 24.95 | 26.06 |
| TraesCS2D01G200900.1 | Wheat | plastid | 2.43 | 6.25 |
Protein Annotations
| KEGG:00500+3.2.1.39 | Gene3D:3.20.20.80 | MapMan:50.3.2 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 |
| GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | InterPro:Glyco_hydro_17 | InterPro:Glycoside_hydrolase_SF |
| PFAM:PF00332 | PFAM:PF07983 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF232 | SMART:SM00768 | SUPFAM:SSF51445 |
| SignalP:SignalP-noTM | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS2D01G201000 | EnsemblPlants:TraesCS2D01G201000.1 | InterPro:X8 | SEG:seg |
Description
No Description!
Coordinates
chr2D:-:152662673..152664685
Molecular Weight (calculated)
52671.2 Da
IEP (calculated)
4.812
GRAVY (calculated)
0.066
Length
493 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPRRLEAVA TLFMLMLFNA SGAFVGINIG TGVSDLPSAS DIVSTLKTMK IQHVRLVDSD HQMLVALANT GIEVMVGVPN DQLLRVGQSR PAAVDWVNKN
101: VAAYIPATNI TYIAVGDEVL TSLPNAALVL VPALQFLQSA LLAANLNTQV KLSSPHSMDM IPKAFPPSTA TFNSTWSSVM LPYLQFLKST GSSFMLNAQP
201: YYSYVGGQGV FPLEYALFRS LNPNSQVADP NTNLFYTNMF DAMVDAAYNS MKAMNFTNIS VIVTASGWPW RGGRNEPAAD VDNALAYNTN LIRHVLNNSG
301: TPSQPDNQVS TYLFELFNED RRAGPVSEQN WGIMFTNASA VYSLTFEDVA TNNTDSPALR GMFCVANSSA THSALKQSLD WVCGPGSANC SAIQPGQQCY
401: KADDIVAVAS YAFNDYYHRT QASGGTCNFN GTATISSTDP SHGSCVFAGS NGANGSSGDA AAGPVSQDSF ASQSQSCWLT YLAAVLLPVV LLM
101: VAAYIPATNI TYIAVGDEVL TSLPNAALVL VPALQFLQSA LLAANLNTQV KLSSPHSMDM IPKAFPPSTA TFNSTWSSVM LPYLQFLKST GSSFMLNAQP
201: YYSYVGGQGV FPLEYALFRS LNPNSQVADP NTNLFYTNMF DAMVDAAYNS MKAMNFTNIS VIVTASGWPW RGGRNEPAAD VDNALAYNTN LIRHVLNNSG
301: TPSQPDNQVS TYLFELFNED RRAGPVSEQN WGIMFTNASA VYSLTFEDVA TNNTDSPALR GMFCVANSSA THSALKQSLD WVCGPGSANC SAIQPGQQCY
401: KADDIVAVAS YAFNDYYHRT QASGGTCNFN GTATISSTDP SHGSCVFAGS NGANGSSGDA AAGPVSQDSF ASQSQSCWLT YLAAVLLPVV LLM
001: MLLPRWFAEA LLLLLSILAC SNAAFIGVNI GTDLTNMPPP SDIVTLLKSQ QITHVRLYDA NSHMLKAFAN TSIEVMVGVT NEEILKIGRF PSAAAAWVNK
101: NVAAYIPSTN ITAIAVGSEV LTTIPHVAPI LASALNNIHK ALVASNLNFK VKVSSPMSMD IMPKPFPPST STFSPSWNTT VYQLLQFLKN TGSFFMLNAY
201: PYYGYTTANG IFPLDYALFK QLSPVKQIVD PNTLLHYNSM FDAMVDAAYY SMEALNFSKI PVVVTETGWP SSGGSDEAAA TVANAETFNT NLIKRVLNNS
301: GPPSQPDIPI NTYIYELYNE DKRSGPVSER NWGILFPNGT SVYPLSLSGG SSSAALNGSS MFCVAKADAD DDKLVDGLNW ACGQGRANCA AIQPGQPCYL
401: PNDVKSHASF AFNDYYQKMK SAGGTCDFDG TAITTTRDPS YRTCAYTGSL NANATNGNFP PDALGPASPL GGNANARIIF SYHLPILAPL ALTLLQLLLQ
501: HDRLL
101: NVAAYIPSTN ITAIAVGSEV LTTIPHVAPI LASALNNIHK ALVASNLNFK VKVSSPMSMD IMPKPFPPST STFSPSWNTT VYQLLQFLKN TGSFFMLNAY
201: PYYGYTTANG IFPLDYALFK QLSPVKQIVD PNTLLHYNSM FDAMVDAAYY SMEALNFSKI PVVVTETGWP SSGGSDEAAA TVANAETFNT NLIKRVLNNS
301: GPPSQPDIPI NTYIYELYNE DKRSGPVSER NWGILFPNGT SVYPLSLSGG SSSAALNGSS MFCVAKADAD DDKLVDGLNW ACGQGRANCA AIQPGQPCYL
401: PNDVKSHASF AFNDYYQKMK SAGGTCDFDG TAITTTRDPS YRTCAYTGSL NANATNGNFP PDALGPASPL GGNANARIIF SYHLPILAPL ALTLLQLLLQ
501: HDRLL
Arabidopsis Description
Glucan endo-1,3-beta-glucosidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q94CD8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.