Factsheet for Os07t0577300-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
golgi 5
plasma membrane 8
endoplasmic reticulum 5
vacuole 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

plasma membrane: 18260611
extracellular: 19226311
extracellular: 24083427

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

msms PMID: 24083427 doi

T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu

Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.

msms PMID: 19226311 doi

WK Cho, XY Chen, H Chu, Y Rim, S Kim, ST Kim, SW Kim, ZY Park, JY Kim

Division of Applied Life Science (BK21 Program), Graduate School, Environmental Biotechnology National Core Research Center, PMBBRC, Gyeongsang National University, Jinju, Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU90151	Sorghum	vacuole	82.53	83.2
Zm00001d006658_P005	Maize	extracellular, plasma membrane, vacuole	82.13	83.13
HORVU2Hr1G036980.5	Barley	plasma membrane	80.52	81.5
TraesCS5A01G155600.1	Wheat	plasma membrane	81.12	81.29
TraesCS5B01G153900.1	Wheat	plasma membrane	80.72	80.89
HORVU5Hr1G048630.2	Barley	plasma membrane, vacuole	80.32	80.65
TraesCS2A01G186900.1	Wheat	extracellular, plasma membrane, vacuole	79.72	80.53
TraesCS2D01G201000.1	Wheat	extracellular, plasma membrane, vacuole	79.52	80.32
TraesCS2B01G220300.1	Wheat	plasma membrane	79.32	80.12
Zm00001d021903_P001	Maize	extracellular, plasma membrane, vacuole	80.32	80.0
TraesCS5D01G160700.1	Wheat	plasma membrane	81.12	77.25
GSMUA_Achr2P17770_001	Banana	plasma membrane, vacuole	51.0	63.82
GSMUA_Achr8P15370_001	Banana	extracellular, plasma membrane, vacuole	65.66	63.01
GSMUA_Achr6P29690_001	Banana	extracellular, plasma membrane, vacuole	65.66	62.4
VIT_06s0004g00720.t01	Wine grape	extracellular, vacuole	51.61	54.33
KRH42823	Soybean	extracellular, plasma membrane, vacuole	53.82	54.03
KRH58918	Soybean	endoplasmic reticulum	53.61	53.83
KRH05027	Soybean	extracellular, plasma membrane, vacuole	51.61	51.61
KRH16072	Soybean	extracellular, plasma membrane, vacuole	51.61	51.3
PGSC0003DMT400081837	Potato	extracellular	50.4	50.4
AT3G13560.4	Thale cress	plasma membrane	50.6	49.9
Bra027421.1-P	Field mustard	extracellular, plasma membrane, vacuole	48.8	48.5
CDY59252	Canola	extracellular, plasma membrane, vacuole	37.95	46.32
Os03t0221500-01	Rice	extracellular, plasma membrane, vacuole	46.79	46.23
CDY23618	Canola	endoplasmic reticulum, plasma membrane, vacuole	38.76	45.84
Os07t0510200-01	Rice	plasma membrane	43.98	40.56
Os01t0739700-01	Rice	plasma membrane	36.35	36.71
Os02t0771700-01	Rice	extracellular	35.34	36.07
Os02t0532900-01	Rice	endoplasmic reticulum, extracellular	26.31	33.5
Os01t0860800-01	Rice	extracellular	26.31	32.91
Os03t0227400-01	Rice	plasma membrane	24.1	32.88
Os08t0525800-00	Rice	extracellular, mitochondrion, vacuole	30.32	32.4
Os03t0669300-02	Rice	endoplasmic reticulum	30.12	32.33
Os04t0412300-01	Rice	plasma membrane, plastid, vacuole	25.7	31.45
Os10t0160100-01	Rice	extracellular, vacuole	26.51	31.43
Os04t0681950-00	Rice	vacuole	28.31	31.26
Os11t0704600-01	Rice	extracellular	28.92	30.51
Os09t0502200-01	Rice	extracellular	28.92	30.0
Os06t0131500-01	Rice	plastid	26.91	29.84
Os08t0244500-00	Rice	extracellular	33.13	29.31
Os03t0246100-01	Rice	extracellular, vacuole	25.3	29.3
Os07t0539300-01	Rice	extracellular	33.73	29.12
Os07t0539100-01	Rice	extracellular	31.93	28.75
Os03t0845600-01	Rice	extracellular, vacuole	27.31	28.69
Os07t0538000-01	Rice	extracellular	32.13	28.67
Os02t0200300-02	Rice	golgi, mitochondrion, vacuole	23.9	28.07
Os07t0539400-00	Rice	extracellular, plastid, vacuole	28.71	27.45
Os03t0722500-01	Rice	extracellular, plasma membrane, vacuole	24.3	27.01
Os06t0607000-01	Rice	plasma membrane	25.3	26.14
Os06t0531000-00	Rice	vacuole	25.7	25.81
Os07t0539900-01	Rice	extracellular	30.32	25.08
Os07t0240200-01	Rice	endoplasmic reticulum, extracellular, plasma membrane	24.1	23.95
Os04t0682050-01	Rice	plasma membrane	6.02	11.36
Os04t0681900-02	Rice	endoplasmic reticulum	4.62	6.85

Protein Annotations

KEGG:00500+3.2.1.39	Gene3D:3.20.20.80	EntrezGene:4343706	MapMan:50.3.2	EMBL:AK242837	ProteinID:BAF22001.2
ProteinID:BAT02300.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005488	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020
GO:GO:0016787	GO:GO:0030246	GO:GO:0030247	GO:GO:0046658	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF
EnsemblPlantsGene:Os07g0577300	EnsemblPlants:Os07t0577300-01	PFAM:PF00332	PFAM:PF07983	PANTHER:PTHR32227	PANTHER:PTHR32227:SF232
UniProt:Q0D572	SMART:SM00768	SUPFAM:SSF51445	SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI000188AFE5
InterPro:X8	RefSeq:XP_015647153.1	RefSeq:XP_015647154.1	RefSeq:XP_015647155.1	RefSeq:XP_015647156.1	SEG:seg

Description

Glycoside hydrolase, family 17 protein. (Os07t0577300-01)

Coordinates

chr7:+:23344170..23348587

Molecular Weight (calculated)

53588.4 Da

IEP (calculated)

5.693

GRAVY (calculated)

-0.013

Length

498 amino acids

Sequence
(BLAST)

001: MLEHRNMWPA SLKGVVILLM LMVFNVSGAF VGINVGTDIS NPPSASDTVS ILKEKKIQHV RLLDSDHQML SALANTGIEV VVGVPNDQLL RVGQSRSTAA
101: DWINKNVAAY IPATNITHIA VGNEVLTTEP NAALVLVPAL QFLQSALLAA NLNTQVKISS PHSTDMISKP FPPSTATFNS TWSSIMLQYL QFLNNTASPF
201: MLNAQPYYDY VKGQGVFPLE YALFRSLNPD SQISDPNTNL FYTNMFDAMV DATYNSMQAM NFTGIPVMVT ASGWPSHGGQ NEKAANVDNA LAYNTNLIRH
301: VLNNSGTPGQ PNNQVSTFIF ELFNEDLRAG PVSEKNWGIM FPNATTVYSL TFEDMATTNT DSPVLRGTFC VANSSAPHSA LKQSLDWACG PGSANCSAIQ
401: PGQPCYKSDD IVAVASYAFN DYYHRTRASG GTCNFNSTAM VTSTDPSHGS CIFAGSTGSN GSNGGAASGP VSPDNFATQI HSCWLTHLIT LLSIMVFM

Best Arabidopsis Sequence Match ( AT3G13560.4 )
(BLAST)

001: MLLPRWFAEA LLLLLSILAC SNAAFIGVNI GTDLTNMPPP SDIVTLLKSQ QITHVRLYDA NSHMLKAFAN TSIEVMVGVT NEEILKIGRF PSAAAAWVNK
101: NVAAYIPSTN ITAIAVGSEV LTTIPHVAPI LASALNNIHK ALVASNLNFK VKVSSPMSMD IMPKPFPPST STFSPSWNTT VYQLLQFLKN TGSFFMLNAY
201: PYYGYTTANG IFPLDYALFK QLSPVKQIVD PNTLLHYNSM FDAMVDAAYY SMEALNFSKI PVVVTETGWP SSGGSDEAAA TVANAETFNT NLIKRVLNNS
301: GPPSQPDIPI NTYIYELYNE DKRSGPVSER NWGILFPNGT SVYPLSLSGG SSSAALNGSS MFCVAKADAD DDKLVDGLNW ACGQGRANCA AIQPGQPCYL
401: PNDVKSHASF AFNDYYQKMK SAGGTCDFDG TAITTTRDPS YRTCAYTGSL NANATNGNFP PDALGPASPL GGNANARIIF SYHLPILAPL ALTLLQLLLQ
501: HDRLL

Arabidopsis Description

Glucan endo-1,3-beta-glucosidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q94CD8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.