Factsheet for Os07t0539900-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 7
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

extracellular: 18372294
extracellular: 19038476
plastid: 21433289
extracellular: 23159799
extracellular: 24083427
extracellular: 25047395
extracellular: 26072143
extracellular: 26194822
plasma membrane: 27800704
extracellular: 28232208

msms PMID: 26072143 doi

B Du, Z Wei, Z Wang, X Wang, X Peng, B Du, R Chen, L Zhu, G He

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China., State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China. Electronic address: gche@whu.edu.cn.

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 25047395 doi

JY Kim, J Wu, SJ Kwon, H Oh, SE Lee, SG Kim, Y Wang, GK Agrawal, R Rakwal, KY Kang, IP Ahn, BG Kim, ST Kim

Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.

msms PMID: 23159799 doi

SG Kim, Y Wang, KH Lee, ZY Park, J Park, J Wu, SJ Kwon, YH Lee, GK Agrawal, R Rakwal, ST Kim, KY Kang

Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju, 660-701, South Korea.

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

msms PMID: 24083427 doi

T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu

Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.

msms PMID: 18372294 doi

T Aki, M Shigyo, R Nakano, T Yoneyama, S Yanagisawa

Department of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, 113-8657 Japan.

msms PMID: 26194822 doi

WK Cho, TK Hyun, D Kumar, Y Rim, XY Chen, Y Jo, S Kim, KW Lee, ZY Park, WJ Lucas, JY Kim

Department of Industrial Plant Science and Technology, College of Agricultural, Life and Environmental Sciences, Chungbuk National University, Cheongju 361-763, Korea., Department of Life Science, Gwangju Institute of Science and Technology, Gwangju 500-712, Korea., Department of Plant Biology, University of California, Davis, CA 95616, USA., Division of Applied Life Science (BK21plus), Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju 660-701, Korea.

msms PMID: 19038476 doi

XY Chen, ST Kim, WK Cho, Y Rim, S Kim, SW Kim, KY Kang, ZY Park, JY Kim

Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju 660-701, Republic of Korea.

msms PMID: 28232208 doi

Y Wang, R Gupta, W Song, HH Huh, SE Lee, J Wu, GK Agrawal, R Rakwal, KY Kang, SR Park, ST Kim

Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea., Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea. Electronic address: stkim71@pusan.ac.kr., Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, South Korea., National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, South Korea. Electronic address: srpark@korea.kr., Plant Proteomics Group, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal; Faculty of Health and Sport Sciences, Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8574, Ibaraki, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0539400-00	Rice	extracellular, plastid, vacuole	65.45	75.62
Os07t0538000-01	Rice	extracellular	64.62	69.71
Os07t0539100-01	Rice	extracellular	60.96	66.37
Os08t0244500-00	Rice	extracellular	61.13	65.36
Os07t0539300-01	Rice	extracellular	61.63	64.3
TraesCS7B01G285700.2	Wheat	extracellular	56.15	60.47
TraesCS2B01G241200.3	Wheat	endoplasmic reticulum, extracellular, vacuole	56.15	60.36
TraesCS2B01G241300.1	Wheat	extracellular, vacuole	54.65	59.71
HORVU2Hr1G044450.4	Barley	extracellular, vacuole	55.32	59.36
TraesCS2A01G216200.1	Wheat	extracellular, vacuole	54.32	59.35
TraesCS2D01G221800.1	Wheat	extracellular, vacuole	54.15	59.27
HORVU7Hr1G091100.3	Barley	vacuole	55.48	58.8
HORVU2Hr1G044460.2	Barley	vacuole	53.82	58.48
HORVU1Hr1G092310.2	Barley	extracellular	54.15	57.7
TraesCS1D01G430700.1	Wheat	extracellular, vacuole	53.82	57.55
TraesCS1A01G422900.1	Wheat	extracellular, vacuole	52.99	57.17
TraesCS1B01G454500.1	Wheat	vacuole	52.82	56.68
TraesCS1B01G453900.1	Wheat	vacuole	53.49	56.39
TraesCS1D01G431300.1	Wheat	vacuole	53.65	56.27
TraesCS1D01G431200.1	Wheat	extracellular, vacuole	51.83	55.91
TraesCS1A01G422500.1	Wheat	vacuole	52.66	55.61
HORVU1Hr1G092240.3	Barley	extracellular, vacuole	52.49	53.83
KXG36404	Sorghum	vacuole	49.83	52.91
TraesCS1B01G454200.1	Wheat	extracellular, vacuole	34.22	51.37
Zm00001d021690_P001	Maize	extracellular	49.83	51.37
EER99489	Sorghum	extracellular, vacuole	49.0	50.77
EER99488	Sorghum	extracellular, vacuole	41.03	49.4
GSMUA_Achr9P16150_001	Banana	cytosol, extracellular, plastid, vacuole	33.55	49.39
Os02t0771700-01	Rice	extracellular	40.03	49.39
TraesCS5A01G338400.3	Wheat	endoplasmic reticulum, extracellular, vacuole	40.37	49.29
HORVU5Hr1G084900.2	Barley	endoplasmic reticulum, extracellular, vacuole	38.7	48.44
GSMUA_Achr8P22560_001	Banana	extracellular, vacuole	33.72	48.22
EER99491	Sorghum	extracellular, vacuole	52.49	47.81
Zm00001d021697_P001	Maize	extracellular	53.32	46.19
CDY20780	Canola	extracellular, vacuole	33.22	44.54
VIT_19s0090g01070.t01	Wine grape	extracellular, plasma membrane, vacuole	34.55	44.16
CDY06601	Canola	endoplasmic reticulum, extracellular	32.89	44.1
AT4G26830.2	Thale cress	endoplasmic reticulum, extracellular	33.39	43.79
Zm00001d006538_P001	Maize	vacuole	47.18	43.76
Zm00001d021695_P001	Maize	extracellular	47.01	43.74
CDY36734	Canola	extracellular, vacuole	33.39	43.7
Bra035561.1-P	Field mustard	extracellular, vacuole	33.39	43.7
CDY17308	Canola	extracellular, vacuole	32.56	43.65
CDY18049	Canola	extracellular, vacuole	31.89	43.44
CDY56498	Canola	extracellular, vacuole	31.89	43.44
AT2G05790.1	Thale cress	extracellular, vacuole	34.05	43.43
PGSC0003DMT400001833	Potato	extracellular, vacuole	33.72	43.38
Solyc07g049370.2.1	Tomato	extracellular, vacuole	33.72	43.38
CDY12009	Canola	extracellular, vacuole	33.06	43.26
KRH73361	Soybean	extracellular, vacuole	33.89	43.22
KRH14333	Soybean	endoplasmic reticulum, extracellular	32.89	42.95
CDY46679	Canola	extracellular, vacuole	31.73	42.83
KRH14776	Soybean	extracellular, vacuole	33.72	42.56
CDY19908	Canola	extracellular, vacuole	32.39	42.48
VIT_12s0059g01320.t01	Wine grape	extracellular, vacuole	33.06	42.25
KRH73795	Soybean	extracellular, vacuole	33.06	42.16
CDX92794	Canola	endoplasmic reticulum, extracellular	31.56	42.13
Bra002927.1-P	Field mustard	extracellular, vacuole	32.39	42.12
PGSC0003DMT400033482	Potato	extracellular, vacuole	32.89	41.77
Bra015166.1-P	Field mustard	extracellular, vacuole	32.72	41.65
AT5G55180.2	Thale cress	endoplasmic reticulum, extracellular	32.06	41.51
Solyc12g014420.1.1	Tomato	extracellular	32.89	41.25
Bra019084.1-P	Field mustard	endoplasmic reticulum, extracellular	32.06	39.15
PGSC0003DMT400033484	Potato	extracellular, vacuole	25.25	38.1
Os03t0669300-02	Rice	endoplasmic reticulum	27.08	35.13
Os01t0860800-01	Rice	extracellular	22.92	34.67
Os02t0532900-01	Rice	endoplasmic reticulum, extracellular	22.26	34.27
Bra028988.1-P	Field mustard	extracellular, vacuole	32.72	34.26
Os04t0681950-00	Rice	vacuole	25.08	33.48
Os08t0525800-00	Rice	extracellular, mitochondrion, vacuole	25.91	33.48
Os01t0739700-01	Rice	plasma membrane	27.41	33.47
Os04t0412300-01	Rice	plasma membrane, plastid, vacuole	21.59	31.94
Os03t0246100-01	Rice	extracellular, vacuole	22.76	31.86
Os03t0221500-01	Rice	extracellular, plasma membrane, vacuole	26.58	31.75
Os03t0227400-01	Rice	plasma membrane	19.1	31.51
Os02t0200300-02	Rice	golgi, mitochondrion, vacuole	22.09	31.37
Os09t0502200-01	Rice	extracellular	24.92	31.25
Os10t0160100-01	Rice	extracellular, vacuole	21.76	31.19
Os11t0704600-01	Rice	extracellular	24.42	31.14
Os07t0510200-01	Rice	plasma membrane	27.41	30.56
Os07t0577300-01	Rice	extracellular	25.08	30.32
Os03t0722500-01	Rice	extracellular, plasma membrane, vacuole	22.09	29.69
Os03t0845600-01	Rice	extracellular, vacuole	23.26	29.54
Os06t0131500-01	Rice	plastid	21.76	29.18
Os06t0531000-00	Rice	vacuole	22.92	27.82
Os07t0240200-01	Rice	endoplasmic reticulum, extracellular, plasma membrane	22.92	27.54
Os06t0607000-01	Rice	plasma membrane	21.76	27.18
Os04t0682050-01	Rice	plasma membrane	5.15	11.74
Os04t0681900-02	Rice	endoplasmic reticulum	5.48	9.82

Protein Annotations

KEGG:00500+3.2.1.39	Gene3D:3.20.20.80	EntrezGene:4343492	MapMan:50.3.2	EMBL:AK071889	EMBL:AK098943
ProteinID:BAF21802.1	ProteinID:BAT01955.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005488
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0030246	GO:GO:0030247	GO:GO:0046658
InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	EnsemblPlantsGene:Os07g0539900	EnsemblPlants:Os07t0539900-01	PFAM:PF00332	PFAM:PF07983
PANTHER:PTHR32227	PANTHER:PTHR32227:SF235	UniProt:Q0D5S1	SMART:SM00768	SUPFAM:SSF51445	SignalP:SignalP-TM
TMHMM:TMhelix	UniParc:UPI000043DEF3	InterPro:X8	RefSeq:XP_015647630.1	SEG:seg	:

Description

Similar to Beta-1,3-glucanase-like protein. (Os07t0539900-01)

Coordinates

chr7:-:21280322..21282626

Molecular Weight (calculated)

64289.3 Da

IEP (calculated)

7.399

GRAVY (calculated)

0.071

Length

602 amino acids

Sequence
(BLAST)

001: MALALAHLIL AAALPLLFLS RAGKRCSCSS VSTAVWCVVF FCFSLLIIYR RVILLRVREK CFSCTADGGE VGVCYGRDGN NLIDPPSVVS LLKAKGITMV
101: RIYDADPTVL NALANQNIKV MVAMSNRDLV AGSAKDFNSA LSWVKNYVLP YYRSSQINGV AVGNEVFQQA PDLTSQLVSA MRNVQAALAR LGLADAIKVS
201: TPISFDSVKV SFPPSAGVFQ DNIAQSVMSP MIDFLQQTNS YLMVNFYPYI AWANSNGQIS RDYAVFGPNA SPVVDQASGI TYHSLFDAQL DAVYFAIDHV
301: SGGSVRVSMA QARRGRPSPR IPVKCSECGH PSGGRLPQLS TLDDVQVDVA TKANAQAFNN GLISRALFGA TGMPDVSVYI FALFNENLKG GASVEQNFGL
401: FYPDGTEVYQ VDFHNGGGGN VCPTKASWCV ANSAVGSTRL QAALDWACSN GADCGAIQPG KTCFAPNTLV AHASYAFNDY YQRKSQASGT CDFSGAAFIV
501: YKPSPSICDP NPSWCIAKPE VGDTRLQNAL DYACGSCADC SAIQRGAQCF DPDTKVAHAT YAFNDYYQTT GRASGSCDFN GAATIVTQQP KIGNCVLSPN
601: NS

Best Arabidopsis Sequence Match ( AT2G05790.1 )
(BLAST)

001: MDLLTPLIFL LLLLSPFSLS DAGSIGVNYG RISDELPSAF KVVQLLKSQG ITRVKIFDAD PSVLKALSGS GIKVTVDLPN ELLFSAAKRT SFAVSWVKRN
101: VAAYHPSTQI ESIAVGNEVF VDTHNTTSFL IPAMRNIHKA LMSFNLHSDI KISSPLALSA LQNSYPSSSG SFRPELIDSV IKPMLDFLRE TGSRLMINVY
201: PFFAYEGNSD VIPLDYALLR ENPGMVDSGN GLRYFNLFDA QIDAVFAAMS ALKYDDIEII VTETGWPSKG DENEVGATLA NAASYNGNLI RRILTRGGTP
301: LRPKADLTVY LFALFNENKK LGPTSERNYG LFFPDEKKVY DIPFTTEGLK HYRDGGHTPV TGGDQVTKPP MSGGVSKSLN GYTWCVANGD AGEERLQGGL
401: DYACGEGGAD CRPIQPGANC YSPDTLEAHA SFAFNSYYQK KGRAGGSCYF GGAAYVVSQP PKYGRCEFPT GY

Arabidopsis Description

O-Glycosyl hydrolases family 17 protein [Source:UniProtKB/TrEMBL;Acc:F4IHD3]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.