Factsheet for TraesCS1B01G453900.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G431300.1	Wheat	vacuole	96.67	96.17
TraesCS1A01G422500.1	Wheat	vacuole	94.05	94.21
HORVU1Hr1G092310.2	Barley	extracellular	85.81	86.73
TraesCS1B01G454500.1	Wheat	vacuole	82.66	84.14
TraesCS1B01G454200.1	Wheat	extracellular, vacuole	54.64	77.81
TraesCS7B01G285700.2	Wheat	extracellular	61.3	62.61
TraesCS2B01G241300.1	Wheat	extracellular, vacuole	60.07	62.25
TraesCS2B01G241200.3	Wheat	endoplasmic reticulum, extracellular, vacuole	60.42	61.61
Os07t0539400-00	Rice	extracellular, plastid, vacuole	53.06	58.16
KXG36404	Sorghum	vacuole	57.62	58.02
Os07t0538000-01	Rice	extracellular	56.39	57.71
EER99489	Sorghum	extracellular, vacuole	56.04	55.08
Zm00001d021690_P001	Maize	extracellular	55.87	54.62
Os07t0539100-01	Rice	extracellular	52.54	54.25
TraesCS6B01G355600.1	Wheat	vacuole	45.36	54.18
Os07t0539900-01	Rice	extracellular	56.39	53.49
Os08t0244500-00	Rice	extracellular	52.71	53.46
GSMUA_Achr8P22560_001	Banana	extracellular, vacuole	38.88	52.73
GSMUA_Achr9P16150_001	Banana	cytosol, extracellular, plastid, vacuole	37.65	52.57
EER99488	Sorghum	extracellular, vacuole	45.36	51.8
Os07t0539300-01	Rice	extracellular	52.01	51.47
EER99491	Sorghum	extracellular, vacuole	59.37	51.29
CDY20780	Canola	extracellular, vacuole	37.83	48.11
CDY06601	Canola	endoplasmic reticulum, extracellular	37.83	48.11
Zm00001d021695_P001	Maize	extracellular	54.47	48.07
Zm00001d021697_P001	Maize	extracellular	57.97	47.63
Bra035561.1-P	Field mustard	extracellular, vacuole	38.35	47.61
VIT_12s0059g01320.t01	Wine grape	extracellular, vacuole	39.23	47.56
CDY36734	Canola	extracellular, vacuole	38.0	47.17
CDY46679	Canola	extracellular, vacuole	36.78	47.09
KRH14333	Soybean	endoplasmic reticulum, extracellular	38.0	47.07
CDX92794	Canola	endoplasmic reticulum, extracellular	37.13	47.01
CDY17308	Canola	extracellular, vacuole	36.95	46.99
Zm00001d006538_P001	Maize	vacuole	53.06	46.69
PGSC0003DMT400033482	Potato	extracellular, vacuole	38.7	46.62
Solyc07g049370.2.1	Tomato	extracellular, vacuole	38.18	46.58
PGSC0003DMT400001833	Potato	extracellular, vacuole	38.18	46.58
CDY19908	Canola	extracellular, vacuole	37.3	46.41
CDY56498	Canola	extracellular, vacuole	35.9	46.38
CDY12009	Canola	extracellular, vacuole	37.3	46.3
KRH73795	Soybean	extracellular, vacuole	38.0	45.97
VIT_19s0090g01070.t01	Wine grape	extracellular, plasma membrane, vacuole	37.83	45.86
Solyc12g014420.1.1	Tomato	extracellular	38.53	45.83
AT2G05790.1	Thale cress	extracellular, vacuole	37.83	45.76
CDY18049	Canola	extracellular, vacuole	35.38	45.7
KRH73361	Soybean	extracellular, vacuole	37.65	45.55
AT4G26830.2	Thale cress	endoplasmic reticulum, extracellular	36.6	45.53
Bra002927.1-P	Field mustard	extracellular, vacuole	36.78	45.36
AT5G55180.2	Thale cress	endoplasmic reticulum, extracellular	36.6	44.95
KRH14776	Soybean	extracellular, vacuole	37.48	44.86
Bra015166.1-P	Field mustard	extracellular, vacuole	36.6	44.19
PGSC0003DMT400033484	Potato	extracellular, vacuole	30.12	43.11
Bra019084.1-P	Field mustard	endoplasmic reticulum, extracellular	37.13	43.0
Bra028988.1-P	Field mustard	extracellular, vacuole	37.48	37.22
TraesCS3B01G406200.2	Wheat	extracellular, plasma membrane, vacuole	26.09	36.52
TraesCS4B01G142000.1	Wheat	golgi	29.25	36.15
TraesCS4B01G020100.1	Wheat	extracellular	29.07	35.85
TraesCS2B01G459400.1	Wheat	extracellular	28.2	35.0
TraesCS1B01G285400.2	Wheat	mitochondrion, plasma membrane, plastid, vacuole	24.69	34.31
TraesCS1B01G072500.1	Wheat	extracellular, vacuole	24.34	34.24
TraesCS2B01G311200.1	Wheat	extracellular, plasma membrane, vacuole	23.29	34.02
TraesCS7B01G233500.1	Wheat	extracellular	23.99	33.83
TraesCS3B01G311300.2	Wheat	vacuole	31.35	33.71
TraesCS7B01G279900.1	Wheat	golgi, vacuole	23.12	33.08
TraesCS1B01G072600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	23.29	33.0
TraesCS3B01G278400.1	Wheat	extracellular, vacuole	22.59	32.99
TraesCS4B01G225100.1	Wheat	vacuole	23.64	32.3
TraesCS4B01G053700.2	Wheat	vacuole	23.64	32.3
TraesCS7B01G153600.1	Wheat	vacuole	27.67	32.05
TraesCS2B01G220300.1	Wheat	plasma membrane	27.15	31.44
TraesCS4B01G242300.1	Wheat	extracellular	27.32	31.2
TraesCS5B01G279000.2	Wheat	extracellular	29.6	30.34
TraesCS5B01G153900.1	Wheat	plasma membrane	26.09	29.98
TraesCS2B01G274900.1	Wheat	plasma membrane	27.67	29.7
TraesCS5B01G329800.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, vacuole	24.87	28.98
TraesCS6B01G188000.1	Wheat	plastid	22.42	28.96
TraesCS4B01G233900.2	Wheat	plasma membrane, plastid, vacuole	21.54	26.68

Protein Annotations

EnsemblPlants:TraesCS1B01G453900.1	EnsemblPlantsGene:TraesCS1B01G453900	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF
InterPro:X8	KEGG:00500+3.2.1.39	PANTHER:PTHR32227	PANTHER:PTHR32227:SF235	PFAM:PF00332	PFAM:PF07983
SEG:seg	SignalP:SignalP-noTM	SMART:SM00768	SUPFAM:SSF51445	MapMan:50.3.2	:

Description

No Description!

Coordinates

chr1B:+:669922599..669924501

Molecular Weight (calculated)

60298.3 Da

IEP (calculated)

4.893

GRAVY (calculated)

-0.043

Length

571 amino acids

Sequence
(BLAST)

001: MALMTRLLLA LLGAALPLLF FSPAEGGEVG VCYGRVATDL PDPASVVQLL KKNGITMVRI YDTDPTVLRS LANTDIKVTV ELTNEELPLA AADQNNFALQ
101: WVQSNVKAYY PATLINGVTV GNEVFKEASQ LNSQLVPAMK NVQAALAKLG LADAIKVTTP IAFDALTTSF PPSAGTFRDD IALSVMSPMI DFLQQTGSYL
201: MVNFFPYIAY LATPGMSINY LLFRPNSGVL DTGSGQMYFS LFDAQLDAVY YAMEKLPSSS MHVGGMRKLT AGGGSPDVHH GEEGHPNKGH GGVGTPQNAQ
301: DFMAGLTLQV LQGNSGTAAA NGHIPLTASA VRGTPHRPNA DLNVYIFALF NENSKPEDDQ DFGLFYPNQQ PVYPNPIDFV HGGTSGGPLQ ASYCVANAAV
401: GDAALQAALD FACDNRDGKR ADCSAIQPGQ PCFEPDTKLA HASYAFNDYY QKNGRDRSAC DFSGAGTIVN QAPSGACDPS PSWCVANAAV SDTRLQAALD
501: YACGPGGANC TDIQPGARCF DPDTKVAHAS VAFNSYYQLH GRATGTCDFA GAGIIVRQAP KIGNCVLPST A

Best Arabidopsis Sequence Match ( AT2G05790.1 )
(BLAST)

001: MDLLTPLIFL LLLLSPFSLS DAGSIGVNYG RISDELPSAF KVVQLLKSQG ITRVKIFDAD PSVLKALSGS GIKVTVDLPN ELLFSAAKRT SFAVSWVKRN
101: VAAYHPSTQI ESIAVGNEVF VDTHNTTSFL IPAMRNIHKA LMSFNLHSDI KISSPLALSA LQNSYPSSSG SFRPELIDSV IKPMLDFLRE TGSRLMINVY
201: PFFAYEGNSD VIPLDYALLR ENPGMVDSGN GLRYFNLFDA QIDAVFAAMS ALKYDDIEII VTETGWPSKG DENEVGATLA NAASYNGNLI RRILTRGGTP
301: LRPKADLTVY LFALFNENKK LGPTSERNYG LFFPDEKKVY DIPFTTEGLK HYRDGGHTPV TGGDQVTKPP MSGGVSKSLN GYTWCVANGD AGEERLQGGL
401: DYACGEGGAD CRPIQPGANC YSPDTLEAHA SFAFNSYYQK KGRAGGSCYF GGAAYVVSQP PKYGRCEFPT GY

Arabidopsis Description

O-Glycosyl hydrolases family 17 protein [Source:UniProtKB/TrEMBL;Acc:F4IHD3]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.