Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G201000.1 | Wheat | extracellular, plasma membrane, vacuole | 98.38 | 98.38 |
| TraesCS2A01G186900.1 | Wheat | extracellular, plasma membrane, vacuole | 96.35 | 96.35 |
| HORVU2Hr1G036980.5 | Barley | plasma membrane | 93.31 | 93.5 |
| TraesCS5B01G153900.1 | Wheat | plasma membrane | 86.21 | 85.51 |
| OQU90151 | Sorghum | vacuole | 79.72 | 79.55 |
| Os07t0577300-01 | Rice | extracellular | 80.12 | 79.32 |
| Zm00001d006658_P005 | Maize | extracellular, plasma membrane, vacuole | 78.7 | 78.86 |
| Zm00001d021903_P001 | Maize | extracellular, plasma membrane, vacuole | 78.3 | 77.2 |
| GSMUA_Achr2P17770_001 | Banana | plasma membrane, vacuole | 52.13 | 64.57 |
| GSMUA_Achr6P29690_001 | Banana | extracellular, plasma membrane, vacuole | 66.33 | 62.4 |
| GSMUA_Achr8P15370_001 | Banana | extracellular, plasma membrane, vacuole | 65.52 | 62.24 |
| KRH42823 | Soybean | extracellular, plasma membrane, vacuole | 54.36 | 54.03 |
| KRH58918 | Soybean | endoplasmic reticulum | 53.75 | 53.43 |
| VIT_06s0004g00720.t01 | Wine grape | extracellular, vacuole | 50.3 | 52.43 |
| PGSC0003DMT400081837 | Potato | extracellular | 51.12 | 50.6 |
| KRH16072 | Soybean | extracellular, plasma membrane, vacuole | 51.32 | 50.5 |
| KRH05027 | Soybean | extracellular, plasma membrane, vacuole | 50.91 | 50.4 |
| AT3G13560.4 | Thale cress | plasma membrane | 51.12 | 49.9 |
| Bra027421.1-P | Field mustard | extracellular, plasma membrane, vacuole | 48.28 | 47.51 |
| CDY59252 | Canola | extracellular, plasma membrane, vacuole | 37.93 | 45.83 |
| TraesCS4B01G242300.1 | Wheat | extracellular | 46.04 | 45.4 |
| CDY23618 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 38.54 | 45.13 |
| TraesCS2B01G274900.1 | Wheat | plasma membrane | 41.38 | 38.35 |
| TraesCS6B01G355600.1 | Wheat | vacuole | 35.5 | 36.61 |
| TraesCS3B01G311300.2 | Wheat | vacuole | 36.92 | 34.27 |
| TraesCS3B01G406200.2 | Wheat | extracellular, plasma membrane, vacuole | 27.59 | 33.33 |
| TraesCS4B01G020100.1 | Wheat | extracellular | 31.24 | 33.26 |
| TraesCS2B01G459400.1 | Wheat | extracellular | 31.03 | 33.26 |
| TraesCS7B01G285700.2 | Wheat | extracellular | 35.09 | 30.95 |
| TraesCS1B01G072500.1 | Wheat | extracellular, vacuole | 25.36 | 30.79 |
| TraesCS2B01G311200.1 | Wheat | extracellular, plasma membrane, vacuole | 24.34 | 30.69 |
| TraesCS7B01G233500.1 | Wheat | extracellular | 25.15 | 30.62 |
| TraesCS7B01G153600.1 | Wheat | vacuole | 30.43 | 30.43 |
| TraesCS4B01G142000.1 | Wheat | golgi | 28.4 | 30.3 |
| TraesCS1B01G454200.1 | Wheat | extracellular, vacuole | 24.54 | 30.17 |
| TraesCS7B01G279900.1 | Wheat | golgi, vacuole | 24.34 | 30.08 |
| TraesCS1B01G285400.2 | Wheat | mitochondrion, plasma membrane, plastid, vacuole | 24.75 | 29.68 |
| TraesCS4B01G053700.2 | Wheat | vacuole | 25.15 | 29.67 |
| TraesCS1B01G072600.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 24.14 | 29.53 |
| TraesCS4B01G225100.1 | Wheat | vacuole | 24.95 | 29.43 |
| TraesCS3B01G278400.1 | Wheat | extracellular, vacuole | 23.33 | 29.41 |
| TraesCS2B01G241200.3 | Wheat | endoplasmic reticulum, extracellular, vacuole | 32.66 | 28.75 |
| TraesCS2B01G241300.1 | Wheat | extracellular, vacuole | 31.44 | 28.13 |
| TraesCS1B01G453900.1 | Wheat | vacuole | 31.44 | 27.15 |
| TraesCS4B01G233900.2 | Wheat | plasma membrane, plastid, vacuole | 25.36 | 27.11 |
| TraesCS1B01G454500.1 | Wheat | vacuole | 30.43 | 26.74 |
| TraesCS6B01G188000.1 | Wheat | plastid | 23.33 | 26.02 |
| TraesCS5B01G279000.2 | Wheat | extracellular | 29.01 | 25.67 |
| TraesCS5B01G329800.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, vacuole | 25.15 | 25.31 |
Protein Annotations
| KEGG:00500+3.2.1.39 | Gene3D:3.20.20.80 | MapMan:50.3.2 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 |
| GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | InterPro:Glyco_hydro_17 | InterPro:Glycoside_hydrolase_SF |
| PFAM:PF00332 | PFAM:PF07983 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF232 | SMART:SM00768 | SUPFAM:SSF51445 |
| SignalP:SignalP-noTM | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS2B01G220300 | EnsemblPlants:TraesCS2B01G220300.1 | InterPro:X8 | SEG:seg |
Description
No Description!
Coordinates
chr2B:-:210667449..210669437
Molecular Weight (calculated)
52570.0 Da
IEP (calculated)
4.812
GRAVY (calculated)
0.056
Length
493 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPRRPEAVA TLFMLMLFNA SGAFVGINIG TGVSDLPSAS DIVSTLKAMK IQHVRLVDSD HQMLVALANT GIEVMVGVPN DQLLRVGQSR PAAVDWVNKN
101: VAAYIPATNI TYIAVGDEVL STLPNAALVL VPALQFLQSA LLAANLNTQV KLSSPHSMDM IPKAFPPSTA TFNSTWSSIM LPYLQFLKST GSSFMLNAQP
201: YYSYVGGQGV FPLEYALFRS LNPNSQVADP NTNLFYTNMF DAMVDAAYNS MKAMNFTNIS VIVTASGWPW RGGRNEPAAD VDNALAYNTN LIRHVLNNSG
301: TPSQPDNQVS TYLFELFNED RRAGPVSEQS WGIMFTNASA VYSLTFEDVA TNNTDSPGLR GMFCVANSSA THSALKQSLD WVCGPGSANC SAIQPGQQCY
401: KADDIVAVAS YAFNDYYHRT QASGGTCNFN GTATISSTDP SHGSCVFAGS NGANGSSGDA AAGPVSQDSF ASQSQSCWLT YLAAVLLPAV LLM
101: VAAYIPATNI TYIAVGDEVL STLPNAALVL VPALQFLQSA LLAANLNTQV KLSSPHSMDM IPKAFPPSTA TFNSTWSSIM LPYLQFLKST GSSFMLNAQP
201: YYSYVGGQGV FPLEYALFRS LNPNSQVADP NTNLFYTNMF DAMVDAAYNS MKAMNFTNIS VIVTASGWPW RGGRNEPAAD VDNALAYNTN LIRHVLNNSG
301: TPSQPDNQVS TYLFELFNED RRAGPVSEQS WGIMFTNASA VYSLTFEDVA TNNTDSPGLR GMFCVANSSA THSALKQSLD WVCGPGSANC SAIQPGQQCY
401: KADDIVAVAS YAFNDYYHRT QASGGTCNFN GTATISSTDP SHGSCVFAGS NGANGSSGDA AAGPVSQDSF ASQSQSCWLT YLAAVLLPAV LLM
001: MLLPRWFAEA LLLLLSILAC SNAAFIGVNI GTDLTNMPPP SDIVTLLKSQ QITHVRLYDA NSHMLKAFAN TSIEVMVGVT NEEILKIGRF PSAAAAWVNK
101: NVAAYIPSTN ITAIAVGSEV LTTIPHVAPI LASALNNIHK ALVASNLNFK VKVSSPMSMD IMPKPFPPST STFSPSWNTT VYQLLQFLKN TGSFFMLNAY
201: PYYGYTTANG IFPLDYALFK QLSPVKQIVD PNTLLHYNSM FDAMVDAAYY SMEALNFSKI PVVVTETGWP SSGGSDEAAA TVANAETFNT NLIKRVLNNS
301: GPPSQPDIPI NTYIYELYNE DKRSGPVSER NWGILFPNGT SVYPLSLSGG SSSAALNGSS MFCVAKADAD DDKLVDGLNW ACGQGRANCA AIQPGQPCYL
401: PNDVKSHASF AFNDYYQKMK SAGGTCDFDG TAITTTRDPS YRTCAYTGSL NANATNGNFP PDALGPASPL GGNANARIIF SYHLPILAPL ALTLLQLLLQ
501: HDRLL
101: NVAAYIPSTN ITAIAVGSEV LTTIPHVAPI LASALNNIHK ALVASNLNFK VKVSSPMSMD IMPKPFPPST STFSPSWNTT VYQLLQFLKN TGSFFMLNAY
201: PYYGYTTANG IFPLDYALFK QLSPVKQIVD PNTLLHYNSM FDAMVDAAYY SMEALNFSKI PVVVTETGWP SSGGSDEAAA TVANAETFNT NLIKRVLNNS
301: GPPSQPDIPI NTYIYELYNE DKRSGPVSER NWGILFPNGT SVYPLSLSGG SSSAALNGSS MFCVAKADAD DDKLVDGLNW ACGQGRANCA AIQPGQPCYL
401: PNDVKSHASF AFNDYYQKMK SAGGTCDFDG TAITTTRDPS YRTCAYTGSL NANATNGNFP PDALGPASPL GGNANARIIF SYHLPILAPL ALTLLQLLLQ
501: HDRLL
Arabidopsis Description
Glucan endo-1,3-beta-glucosidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q94CD8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.