Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G329400.1 | Wheat | endoplasmic reticulum, extracellular | 99.01 | 99.01 |
| TraesCS7A01G349200.1 | Wheat | endoplasmic reticulum, extracellular | 96.54 | 96.54 |
| HORVU7Hr1G079650.7 | Barley | extracellular, vacuole | 91.11 | 84.05 |
| EER88444 | Sorghum | extracellular, vacuole | 74.57 | 74.02 |
| Zm00001d046134_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 74.07 | 73.71 |
| Os06t0531000-00 | Rice | vacuole | 75.56 | 61.69 |
| VIT_10s0003g03690.t01 | Wine grape | extracellular | 55.31 | 59.73 |
| CDX99881 | Canola | extracellular, vacuole | 52.1 | 55.82 |
| Bra032357.1-P | Field mustard | extracellular, vacuole | 52.1 | 55.82 |
| KRH11184 | Soybean | endoplasmic reticulum, extracellular, vacuole | 53.58 | 54.52 |
| Bra010800.1-P | Field mustard | vacuole | 51.11 | 54.19 |
| KRH21069 | Soybean | vacuole | 53.09 | 53.88 |
| KRG89350 | Soybean | extracellular, vacuole | 52.84 | 53.5 |
| CDY26296 | Canola | extracellular, plasma membrane, vacuole | 52.59 | 53.38 |
| AT1G30080.1 | Thale cress | vacuole | 53.58 | 53.19 |
| Solyc02g070450.1.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 52.35 | 53.13 |
| CDY63842 | Canola | golgi, vacuole | 37.53 | 52.78 |
| CDX90225 | Canola | vacuole | 52.35 | 52.35 |
| CDX99476 | Canola | vacuole | 50.62 | 51.12 |
| CDX78840 | Canola | vacuole | 50.37 | 50.87 |
| Bra013297.1-P | Field mustard | vacuole | 50.37 | 50.87 |
| AT4G18340.1 | Thale cress | vacuole | 49.63 | 50.63 |
| CDX76528 | Canola | extracellular, vacuole | 49.14 | 50.25 |
| KRH50394 | Soybean | extracellular, vacuole | 53.58 | 49.89 |
| Bra012604.1-P | Field mustard | vacuole | 48.64 | 49.62 |
| CDX90405 | Canola | vacuole | 48.64 | 49.62 |
| CDY01532 | Canola | vacuole | 48.4 | 49.37 |
| CDY34065 | Canola | extracellular, vacuole | 48.89 | 49.01 |
| TraesCS3B01G278400.1 | Wheat | extracellular, vacuole | 44.2 | 45.78 |
| TraesCS3B01G406200.2 | Wheat | extracellular, plasma membrane, vacuole | 44.94 | 44.61 |
| TraesCS2B01G311200.1 | Wheat | extracellular, plasma membrane, vacuole | 42.96 | 44.5 |
| TraesCS1B01G285400.2 | Wheat | mitochondrion, plasma membrane, plastid, vacuole | 44.94 | 44.28 |
| TraesCS1B01G072500.1 | Wheat | extracellular, vacuole | 41.98 | 41.87 |
| TraesCS1B01G072600.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 41.23 | 41.44 |
| TraesCS4B01G225100.1 | Wheat | vacuole | 40.0 | 38.76 |
| TraesCS7B01G279900.1 | Wheat | golgi, vacuole | 36.79 | 37.34 |
| TraesCS4B01G053700.2 | Wheat | vacuole | 38.52 | 37.32 |
| TraesCS6B01G355600.1 | Wheat | vacuole | 42.72 | 36.19 |
| TraesCS4B01G020100.1 | Wheat | extracellular | 39.26 | 34.34 |
| TraesCS6B01G188000.1 | Wheat | plastid | 37.28 | 34.16 |
| TraesCS1B01G454200.1 | Wheat | extracellular, vacuole | 33.33 | 33.67 |
| TraesCS4B01G233900.2 | Wheat | plasma membrane, plastid, vacuole | 37.53 | 32.97 |
| TraesCS2B01G459400.1 | Wheat | extracellular | 34.57 | 30.43 |
| TraesCS4B01G142000.1 | Wheat | golgi | 33.58 | 29.44 |
| TraesCS7B01G153600.1 | Wheat | vacuole | 35.31 | 29.01 |
| TraesCS5B01G329800.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, vacuole | 34.81 | 28.78 |
| TraesCS3B01G311300.2 | Wheat | vacuole | 36.79 | 28.06 |
| TraesCS7B01G285700.2 | Wheat | extracellular | 37.04 | 26.83 |
| TraesCS5B01G279000.2 | Wheat | extracellular | 36.05 | 26.21 |
| TraesCS4B01G242300.1 | Wheat | extracellular | 32.1 | 26.0 |
| TraesCS2B01G241200.3 | Wheat | endoplasmic reticulum, extracellular, vacuole | 35.8 | 25.89 |
| TraesCS2B01G220300.1 | Wheat | plasma membrane | 30.62 | 25.15 |
| TraesCS2B01G241300.1 | Wheat | extracellular, vacuole | 33.09 | 24.32 |
| TraesCS1B01G453900.1 | Wheat | vacuole | 33.83 | 23.99 |
| TraesCS5B01G153900.1 | Wheat | plasma membrane | 29.38 | 23.94 |
| TraesCS1B01G454500.1 | Wheat | vacuole | 33.09 | 23.89 |
| TraesCS2B01G274900.1 | Wheat | plasma membrane | 31.36 | 23.87 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G233500.1 | EnsemblPlantsGene:TraesCS7B01G233500 | Gene3D:3.20.20.80 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 |
| GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | InterPro:Glyco_hydro_17 | InterPro:Glycoside_hydrolase_SF |
| KEGG:00500+3.2.1.39 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF85 | PFAM:PF00332 | ScanProsite:PS00587 | SEG:seg |
| SignalP:SignalP-noTM | SUPFAM:SSF51445 | MapMan:50.3.2 | : | : | : |
Description
No Description!
Coordinates
chr7B:+:437363359..437365911
Molecular Weight (calculated)
43237.9 Da
IEP (calculated)
4.927
GRAVY (calculated)
0.202
Length
405 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPFATPMRL ASLQLSALLC ILLCSEVWVL QCGAAIGINY GQVGNNLPTP AQVVSLLSSL RVGKVRIYDV NPQVLAAFAG TGIELIVTVP NDLVQPMAAN
101: AGQAMQWATA NIKPYFPATR VTGIAVGNEV FTDDDEALKA SLVPAMRNLH AALAQLGMDG YVHVSTASSL GVLANSYPPS QGAFTPECAP LMLPFLRFLA
201: ETNAPFWINA YPYFAYKADP ANVSLSYALS DPYHVGAVDP YTHLQYTSML YAQVDAVTFA AARLGYGGIP VFVSETGWPS KGDADEVGAT VENARAYNRN
301: LLVRQVGNEG TPLRPRQRLE VYLFALFNED MKPGPTSERN YGLYQPDGRM VYNVGLAQQQ TTSAASLSLA ASSAPPTRDV GTDLTSLCIL SALAILLTSQ
401: AFLLG
101: AGQAMQWATA NIKPYFPATR VTGIAVGNEV FTDDDEALKA SLVPAMRNLH AALAQLGMDG YVHVSTASSL GVLANSYPPS QGAFTPECAP LMLPFLRFLA
201: ETNAPFWINA YPYFAYKADP ANVSLSYALS DPYHVGAVDP YTHLQYTSML YAQVDAVTFA AARLGYGGIP VFVSETGWPS KGDADEVGAT VENARAYNRN
301: LLVRQVGNEG TPLRPRQRLE VYLFALFNED MKPGPTSERN YGLYQPDGRM VYNVGLAQQQ TTSAASLSLA ASSAPPTRDV GTDLTSLCIL SALAILLTSQ
401: AFLLG
001: MTSRTFTRHS SLIHVFLLLS LVFSGNILQT VTSLGINYGQ VGNNLPSPDK VINLLRSLRI TKTRIYDTNP QILSAFANSN IEIIVTIENQ VLPLLQDPQQ
101: ATQWVDSHIK PYVPATRITG IMVGNELFTD DDSSLIGYMM PAIINIHKAL VQLGLDRYIQ VSSPSSLAVL GESYPPSAGS FKPEVSSVMQ QLLDFLEATK
201: SPFWINAYPY FAYKDNPQEI PVDYVLFNRN IGMTDPNTRL HYDNMMYAQV DAVAFAAAKL GYRNIEVRVA ETGWPSKGDV GEIGASPVNA ATYNRNLMMR
301: QFAGEGTPAR RNARLDVYIF ALFNEDMKPG PTSEKNYGIF QPDGSLAYNL GFSTMSTTTA NSESVTYSSS ATKAKRSLEY WTILILAMVQ VVMLRLF
101: ATQWVDSHIK PYVPATRITG IMVGNELFTD DDSSLIGYMM PAIINIHKAL VQLGLDRYIQ VSSPSSLAVL GESYPPSAGS FKPEVSSVMQ QLLDFLEATK
201: SPFWINAYPY FAYKDNPQEI PVDYVLFNRN IGMTDPNTRL HYDNMMYAQV DAVAFAAAKL GYRNIEVRVA ETGWPSKGDV GEIGASPVNA ATYNRNLMMR
301: QFAGEGTPAR RNARLDVYIF ALFNEDMKPG PTSEKNYGIF QPDGSLAYNL GFSTMSTTTA NSESVTYSSS ATKAKRSLEY WTILILAMVQ VVMLRLF
Arabidopsis Description
Beta-1,3-glucanase-like protein [Source:UniProtKB/TrEMBL;Acc:Q8L837]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.