Factsheet for Bra032357.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 8
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX99881	Canola	extracellular, vacuole	98.68	98.68
Bra010800.1-P	Field mustard	vacuole	89.15	88.22
AT1G30080.1	Thale cress	vacuole	89.42	82.84
VIT_10s0003g03690.t01	Wine grape	extracellular	68.78	69.33
Bra012604.1-P	Field mustard	vacuole	62.17	59.19
Bra013297.1-P	Field mustard	vacuole	62.7	59.1
Zm00001d046134_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	57.41	53.32
EER88444	Sorghum	extracellular, vacuole	57.41	53.19
TraesCS7A01G349200.1	Wheat	endoplasmic reticulum, extracellular	56.08	52.35
TraesCS7D01G329400.1	Wheat	endoplasmic reticulum, extracellular	55.82	52.1
TraesCS7B01G233500.1	Wheat	extracellular	55.82	52.1
HORVU7Hr1G079650.7	Barley	extracellular, vacuole	55.29	47.61
Bra000508.1-P	Field mustard	extracellular, vacuole	45.77	44.36
Os06t0531000-00	Rice	vacuole	55.56	42.34
Bra023293.1-P	Field mustard	extracellular	46.3	42.27
Bra012015.1-P	Field mustard	plasma membrane, vacuole	46.3	41.97
Bra021137.1-P	Field mustard	plasma membrane	41.01	40.16
Bra028526.1-P	Field mustard	extracellular, vacuole	45.5	40.0
Bra000536.1-P	Field mustard	golgi, plasma membrane, vacuole	38.36	38.36
Bra033641.1-P	Field mustard	extracellular, vacuole	41.53	36.34
Bra035561.1-P	Field mustard	extracellular, vacuole	44.18	36.3
Bra002927.1-P	Field mustard	extracellular, vacuole	43.65	35.64
Bra015166.1-P	Field mustard	extracellular, vacuole	43.92	35.1
Bra036510.1-P	Field mustard	cytoskeleton, extracellular, plastid, vacuole	40.74	34.3
Bra019084.1-P	Field mustard	endoplasmic reticulum, extracellular	43.65	33.47
Bra039852.1-P	Field mustard	vacuole	39.42	31.97
Bra007162.1-P	Field mustard	extracellular	37.04	31.11
Bra014747.1-P	Field mustard	extracellular	37.04	31.04
Bra005028.1-P	Field mustard	extracellular	36.77	31.03
Bra011537.1-P	Field mustard	extracellular, plasma membrane, vacuole	40.48	30.24
Bra003212.1-P	Field mustard	extracellular	35.71	30.07
Bra007161.1-P	Field mustard	extracellular	35.98	30.02
Bra002805.1-P	Field mustard	nucleus, plastid, vacuole	38.1	29.27
Bra028988.1-P	Field mustard	extracellular, vacuole	44.18	29.04
Bra026644.1-P	Field mustard	extracellular	38.1	28.97
Bra010330.1-P	Field mustard	cytosol	39.68	28.68
Bra029639.1-P	Field mustard	vacuole	34.66	28.48
Bra032758.1-P	Field mustard	vacuole	35.98	28.33
Bra001918.1-P	Field mustard	extracellular, vacuole	35.98	28.33
Bra014979.1-P	Field mustard	extracellular, vacuole	35.71	28.24
Bra028343.1-P	Field mustard	extracellular, vacuole	35.19	27.94
Bra037057.1-P	Field mustard	extracellular, vacuole	34.66	27.35
Bra011100.1-P	Field mustard	extracellular, plasma membrane, vacuole	36.24	27.29
Bra017659.1-P	Field mustard	vacuole	39.95	27.26
Bra039757.1-P	Field mustard	extracellular, vacuole	35.19	26.34
Bra027421.1-P	Field mustard	extracellular, plasma membrane, vacuole	34.39	25.95
Bra038969.1-P	Field mustard	extracellular, vacuole	33.86	25.35
Bra016812.1-P	Field mustard	extracellular	34.13	24.86
Bra027207.1-P	Field mustard	plastid	33.07	23.67
Bra001245.1-P	Field mustard	vacuole	35.19	23.5

Protein Annotations

EnsemblPlants:Bra032357.1	EnsemblPlants:Bra032357.1-P	EnsemblPlantsGene:Bra032357	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_17
InterPro:Glycoside_hydrolase_SF	KEGG:00500+3.2.1.39	PANTHER:PTHR32227	PANTHER:PTHR32227:SF85	PFAM:PF00332	SEG:seg
SignalP:SignalP-noTM	SUPFAM:SSF51445	UniParc:UPI00025425CE	UniProt:M4EU75	MapMan:50.3.2	:

Description

AT1G30080 (E=1e-189) | glycosyl hydrolase family 17 protein

Coordinates

chrA09:+:22263722..22265022

Molecular Weight (calculated)

41595.5 Da

IEP (calculated)

4.952

GRAVY (calculated)

-0.059

Length

378 amino acids

Sequence
(BLAST)

001: MTNSIVLLLF FLTFLEHGLF FQRVSSLGIN YGQVGDNLPP PNKVLQLLSS LNINKTRIYD TNPQVLTSFA NSNIELFVTV ENEILPSLVD PQKALQWVTS
101: RIKPYFPATK IGGIAVGNEL YTDDDSSLIG YLVPAMTSIH AALVQTGLDK YIQVSTPSSL SLLQESYPPS AGCFRPQVAG VMTQLLSFLR STKSPFWINA
201: YPYFAYKDSP TKIPLDYVLF NPNPGMVDPY TKYHYDNMLY AQVDAVIFAM ARLGFKDIEV GVSETGWPSK GDGDEIGATV ANAAVYNKNL LKRQLHGEGT
301: PLRPNMSLDV YLFALFNEDL KPGPTSERNY GLYQPDETMT YNVGLLSSSS TSSQSSTSTN SFMSITSSAS TVCTNTGF

Best Arabidopsis Sequence Match ( AT1G30080.2 )
(BLAST)

001: MSNMFSRIAM TNSIVLLLFS LTFLEHGLLF QRVSSLGINY GQVGDNLPPP DKVLQLLSSL HINKTRIYDT NPRVLTSFAN SNIELFVTVE NEMLPSLVDP
101: QQALQWVTTR IKPYFPATKI GGIAVGNELY TDDDSSLIGY LMPAMMSIHG ALVQTGLDKY IQVSTPNSLS VLQESYPPSA GCFRPEVAGV MTQLLGFLRN
201: TNSPFWINAY PYFAYKDSPT KIPLDYVLFN PNPGMVDPYT KYRYDNMLYA QVDAVIFAMA RLGFKDIEVG VSETGWPSKG DGDEVGATVA NAAVYNKNIL
301: RRQLQNEGTP LRPNLSFDVY LFALFNEDLK PGPTSERNYG LYQPDETMTY NVGLLSSSSL TSTSTTSSTS IISLTSSAST VCINI

Arabidopsis Description

Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I4R0]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.