Factsheet for Bra011100.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 7
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68826	Canola	cytosol, endoplasmic reticulum, peroxisome	83.86	99.29
Bra010330.1-P	Field mustard	cytosol	87.85	84.32
AT4G29360.2	Thale cress	vacuole	89.24	82.35
Bra002805.1-P	Field mustard	nucleus, plastid, vacuole	53.59	54.67
Bra035561.1-P	Field mustard	extracellular, vacuole	35.46	38.7
Bra026644.1-P	Field mustard	extracellular	36.85	37.22
Bra015166.1-P	Field mustard	extracellular, vacuole	34.46	36.58
Bra002927.1-P	Field mustard	extracellular, vacuole	33.67	36.5
Bra032357.1-P	Field mustard	extracellular, vacuole	27.29	36.24
Bra010800.1-P	Field mustard	vacuole	27.09	35.6
Bra039757.1-P	Field mustard	extracellular, vacuole	35.46	35.25
Bra019084.1-P	Field mustard	endoplasmic reticulum, extracellular	34.26	34.89
Bra011537.1-P	Field mustard	extracellular, plasma membrane, vacuole	34.86	34.59
Bra039852.1-P	Field mustard	vacuole	31.87	34.33
Bra000536.1-P	Field mustard	golgi, plasma membrane, vacuole	25.7	34.13
Bra000508.1-P	Field mustard	extracellular, vacuole	26.49	34.1
Bra027421.1-P	Field mustard	extracellular, plasma membrane, vacuole	33.47	33.53
Bra012604.1-P	Field mustard	vacuole	26.29	33.25
Bra021137.1-P	Field mustard	plasma membrane	25.5	33.16
Bra005028.1-P	Field mustard	extracellular	29.48	33.04
Bra036510.1-P	Field mustard	cytoskeleton, extracellular, plastid, vacuole	29.48	32.96
Bra007161.1-P	Field mustard	extracellular	29.68	32.89
Bra023293.1-P	Field mustard	extracellular	27.09	32.85
Bra003212.1-P	Field mustard	extracellular	29.28	32.74
Bra014747.1-P	Field mustard	extracellular	29.28	32.59
Bra016812.1-P	Field mustard	extracellular	33.67	32.56
Bra001918.1-P	Field mustard	extracellular, vacuole	30.88	32.29
Bra033641.1-P	Field mustard	extracellular, vacuole	27.69	32.18
Bra013297.1-P	Field mustard	vacuole	25.7	32.17
Bra017659.1-P	Field mustard	vacuole	35.46	32.13
Bra014979.1-P	Field mustard	extracellular, vacuole	30.48	32.01
Bra028343.1-P	Field mustard	extracellular, vacuole	30.28	31.93
Bra007162.1-P	Field mustard	extracellular	28.49	31.78
Bra012015.1-P	Field mustard	plasma membrane, vacuole	26.29	31.65
Bra037057.1-P	Field mustard	extracellular, vacuole	30.08	31.52
Bra029639.1-P	Field mustard	vacuole	28.49	31.09
Bra028526.1-P	Field mustard	extracellular, vacuole	26.1	30.47
Bra028988.1-P	Field mustard	extracellular, vacuole	34.46	30.09
Bra032758.1-P	Field mustard	vacuole	28.49	29.79
Bra038969.1-P	Field mustard	extracellular, vacuole	28.69	28.51
Bra001245.1-P	Field mustard	vacuole	29.28	25.97
Bra027207.1-P	Field mustard	plastid	20.12	19.13

Protein Annotations

KEGG:00500+3.2.1.39	Gene3D:3.20.20.80	MapMan:50.3.2	EnsemblPlantsGene:Bra011100	EnsemblPlants:Bra011100.1	EnsemblPlants:Bra011100.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	GO:GO:0016798	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	UniProt:M4D3P6	PFAM:PF00332
PFAM:PF07983	ScanProsite:PS00587	PANTHER:PTHR32227	PANTHER:PTHR32227:SF88	SMART:SM00768	SUPFAM:SSF51445
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002545719	InterPro:X8	SEG:seg	:

Description

AT4G29360 (E=4e-120) | glycosyl hydrolase family 17 protein

Coordinates

chrA01:+:3876928..3878906

Molecular Weight (calculated)

54039.1 Da

IEP (calculated)

5.108

GRAVY (calculated)

-0.034

Length

502 amino acids

Sequence
(BLAST)

001: MSERLKLILW ICLSILAFLD FGGAASKIGI CYGRNADNLP TPNKVSELIQ HLNIKFVRIY DANIDVLKAF ANTGIELMIG VPNADLLAFA QFQSNVDTWL
101: HNNILPYYPT TKITSISVGL EVTEAPDNAT GLLLPAMRNI HTALKKSGLD KKIKISSSHS LAVLSRSFPP SSATFSKKHL PFLKPMLEFL VENESPFMID
201: LYPYYAYRDS SEKLDAIYFA LTAMNFKTVK VMVTESGWPS RGSPKETAAT PDNALAYNTN LIRHVVGDPG TPAKPGEEID VYLFSLFNEN RKPGIESERN
301: WGMFYANGTS VYALDFTGES SVPVSPSNSS TTSPGPSSSP GNSTVIIGGG GGGARKWCVA SSQASVTELQ TALDWACGPG SVDCSAVQPD QPCFEPDTVL
401: SHASYAFNTY YQQSGANSSD CSFGGVSVEV DKDPSYGNCL YMIAPSTDGM NRTMAGNITG NITAIDSPMA SPSSSSDGYR QMVVSVAVSV LLPLFVVSLS
501: LW

Best Arabidopsis Sequence Match ( AT4G29360.1 )
(BLAST)

001: MGQRLNLVFW IFVSILAFLN FGMASKIGIC YGRNADNLPS PNRVSELIQH LNIKFVRIYD ANIDVLKAFA NTGIELMIGV PNADLLAFAQ FQSNVDTWLS
101: NNILPYYPST KITSISVGLE VTEAPDNATG LVLPAMRNIH TALKKSGLDK KIKISSSHSL AILSRSFPPS SASFSKKHSA FLKPMLEFLV ENESPFMIDL
201: YPYYAYRDST EKVPLEYALF ESSSQVVDPA TGLLYSNMFD AQLDAIYFAL TAMSFKTVKV MVTESGWPSK GSPKETAATP ENALAYNTNL IRHVIGDPGT
301: PAKPGEEIDV YLFSLFNENR KPGIESERNW GMFYANGTNV YALDFTGENT TPVSPTNSTT GTSPSPSSSP IINGNSTVTI GGGGGGGTKK WCIASSQASV
401: TELQTALDWA CGPGNVDCSA VQPDQPCFEP DTVLSHASYA FNTYYQQSGA SSIDCSFNGA SVEVDKDPSY GNCLYMIAPA TDGFNRTMAG NITGNITAID
501: SPLASPSSTN EAFRQMVVAV SVLLPCFVVC SSIW

Arabidopsis Description

O-Glycosyl hydrolases family 17 protein [Source:TAIR;Acc:AT4G29360]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.