Factsheet for Bra021137.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 8
plasma membrane 7
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY20153	Canola	plasma membrane	99.74	98.47
CDY21869	Canola	plasma membrane	99.48	98.21
AT3G15800.1	Thale cress	golgi, plastid, vacuole	83.68	80.95
KRH09724	Soybean	extracellular, plasma membrane, vacuole	69.17	69.17
PGSC0003DMT400015234	Potato	cytosol, peroxisome, plastid	63.47	66.04
KRH47445	Soybean	extracellular, vacuole	66.58	65.9
KRH44462	Soybean	extracellular, vacuole	66.06	65.55
KRH23581	Soybean	extracellular, vacuole	60.36	64.9
VIT_09s0002g06880.t01	Wine grape	vacuole	66.84	64.66
Solyc06g073710.2.1	Tomato	golgi, mitochondrion, plastid, vacuole	63.47	59.47
Bra000536.1-P	Field mustard	golgi, plasma membrane, vacuole	56.22	57.41
Bra027207.1-P	Field mustard	plastid	71.24	52.08
Bra000508.1-P	Field mustard	extracellular, vacuole	43.26	42.82
Bra032357.1-P	Field mustard	extracellular, vacuole	40.16	41.01
Bra010800.1-P	Field mustard	vacuole	40.41	40.84
Bra023293.1-P	Field mustard	extracellular	43.01	40.1
Bra012015.1-P	Field mustard	plasma membrane, vacuole	43.01	39.81
Bra012604.1-P	Field mustard	vacuole	40.67	39.55
Bra013297.1-P	Field mustard	vacuole	40.41	38.9
Bra028526.1-P	Field mustard	extracellular, vacuole	39.9	35.81
Bra033641.1-P	Field mustard	extracellular, vacuole	37.82	33.8
Bra015166.1-P	Field mustard	extracellular, vacuole	40.16	32.77
Bra039852.1-P	Field mustard	vacuole	39.38	32.62
Bra035561.1-P	Field mustard	extracellular, vacuole	38.6	32.39
Bra002927.1-P	Field mustard	extracellular, vacuole	38.6	32.18
Bra036510.1-P	Field mustard	cytoskeleton, extracellular, plastid, vacuole	36.27	31.18
Bra019084.1-P	Field mustard	endoplasmic reticulum, extracellular	38.34	30.02
Bra029639.1-P	Field mustard	vacuole	35.75	30.0
Bra011537.1-P	Field mustard	extracellular, plasma membrane, vacuole	38.86	29.64
Bra003212.1-P	Field mustard	extracellular	34.2	29.4
Bra014747.1-P	Field mustard	extracellular	33.94	29.05
Bra005028.1-P	Field mustard	extracellular	33.68	29.02
Bra007162.1-P	Field mustard	extracellular	33.68	28.89
Bra014979.1-P	Field mustard	extracellular, vacuole	35.75	28.87
Bra007161.1-P	Field mustard	extracellular	33.68	28.7
Bra028343.1-P	Field mustard	extracellular, vacuole	35.23	28.57
Bra002805.1-P	Field mustard	nucleus, plastid, vacuole	36.01	28.25
Bra026644.1-P	Field mustard	extracellular	36.01	27.97
Bra001918.1-P	Field mustard	extracellular, vacuole	34.46	27.71
Bra017659.1-P	Field mustard	vacuole	39.12	27.26
Bra037057.1-P	Field mustard	extracellular, vacuole	33.68	27.14
Bra027421.1-P	Field mustard	extracellular, plasma membrane, vacuole	34.97	26.95
Bra010330.1-P	Field mustard	cytosol	36.27	26.77
Bra032758.1-P	Field mustard	vacuole	33.16	26.67
Bra039757.1-P	Field mustard	extracellular, vacuole	34.46	26.34
Bra028988.1-P	Field mustard	extracellular, vacuole	38.34	25.74
Bra038969.1-P	Field mustard	extracellular, vacuole	33.42	25.54
Bra011100.1-P	Field mustard	extracellular, plasma membrane, vacuole	33.16	25.5
Bra001245.1-P	Field mustard	vacuole	34.97	23.85
Bra016812.1-P	Field mustard	extracellular	31.09	23.12

Protein Annotations

KEGG:00500+3.2.1.39	Gene3D:3.20.20.80	MapMan:50.3.2	EnsemblPlantsGene:Bra021137	EnsemblPlants:Bra021137.1	EnsemblPlants:Bra021137.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	UniProt:M4DX91	PFAM:PF00332	PANTHER:PTHR32227
PANTHER:PTHR32227:SF129	SUPFAM:SSF51445	SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI0002543DA2	SEG:seg

Description

AT3G15800 (E=4e-172) | glycosyl hydrolase family 17 protein

Coordinates

chrA01:-:23779137..23781250

Molecular Weight (calculated)

42967.8 Da

IEP (calculated)

9.461

GRAVY (calculated)

-0.046

Length

386 amino acids

Sequence
(BLAST)

001: MKYSCMVRST FFLSLLFLFA SQTAVAFIGT YGVNYGRIAD NLPSPEAVAT LLKSAKIRNI RIYDADHSVL TAFRNTGIEI IVGLGNEFLK DISVAEDRAM
101: TWVKENVEPF IRGGTRISGI AVGNEILGGT TIELWEVLLP AAKNVYYALR RLGLHNMVEV SSPHSEAVFQ NSYPPSSCTF RDDVAPFMKP LLTFFWQIGS
201: PFYINAYPFL AYKSDSKEID LNYAIFEHTK GIYDPKTKLH YDNMFDAMVD ASYAALEKAG FPKVQVIVSE TGWASKGDPD EAGASVKNAR TYNRNLKKRL
301: KKRKGTPYRP NMAVKAYVFA LFNENLKPGP TSERNFGLFK PDGSIAYDIG FKGLKDSSAT RCGFGTSLNA LVSACVVMFL LLHRFV

Best Arabidopsis Sequence Match ( AT3G15800.1 )
(BLAST)

001: MGYCVPLRKS PTSHMVFSSF FLSFLLVFSI LSSQTAVAFI GTYGVNYGRI ADNLPSPDAV ATLLKSAKIR NTRIYDADHS VLTAFRGTGI EIIVGLGNEF
101: LKDISVGEDR AMNWIKENVE PFIRGGTKIS GIAVGNEILG GTDIGLWEAL LPAAKNVYSA LRRLGLHNVV EVSSPHSEAV FANSYPPSSC TFRDDVAPFM
201: KPLLAFFWQI QSPFYINAYP FLAYKSDPIT IDINYALFEH NKGILDPKTK LHYDNMFDAM VDASYAALEK AGYTKVPVIV SETGWASKGD ADEPGASVKN
301: ARTYNRNLRK RLQKRKGTPY RPDMVVRAYV FALFNENSKP GPTSERNFGL FKPDGTIAYD IGLTGLKSSS ATRYRFKSSL VSASAFTCLL LLFHRLFHL

Arabidopsis Description

Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J030]
SUBAcon: [golgi,plastid,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.