Factsheet for Bra028526.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13362	Canola	extracellular, vacuole	93.02	96.62
AT5G42100.1	Thale cress	extracellular, vacuole	84.88	85.88
VIT_02s0025g02770.t01	Wine grape	extracellular	54.88	58.27
PGSC0003DMT400031570	Potato	extracellular, vacuole	55.35	57.21
Solyc08g083310.2.1	Tomato	nucleus	55.81	56.74
Bra023293.1-P	Field mustard	extracellular	53.72	55.8
PGSC0003DMT400012898	Potato	cytosol	52.56	54.99
Solyc12g055840.1.1	Tomato	nucleus	53.95	54.98
KRH34248	Soybean	extracellular, plasma membrane, vacuole	52.79	54.83
Bra000508.1-P	Field mustard	extracellular, vacuole	42.79	47.18
TraesCS1A01G055900.1	Wheat	extracellular	31.4	46.71
Zm00001d028410_P001	Maize	vacuole	38.37	45.71
Bra032357.1-P	Field mustard	extracellular, vacuole	40.0	45.5
Os10t0160100-01	Rice	extracellular, vacuole	43.26	44.29
TraesCS1D01G056500.1	Wheat	extracellular, vacuole	41.63	44.2
Bra012015.1-P	Field mustard	plasma membrane, vacuole	42.79	44.12
TraesCS1B01G072500.1	Wheat	extracellular, vacuole	41.63	44.09
Bra010800.1-P	Field mustard	vacuole	39.07	43.98
HORVU1Hr1G010910.2	Barley	extracellular, vacuole	41.86	43.69
TraesCS1A01G049800.1	Wheat	extracellular, vacuole	41.16	43.6
Zm00001d030361_P001	Maize	plasma membrane	40.93	43.56
TraesCS1B01G072600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	40.7	43.42
TraesCS4B01G225100.1	Wheat	vacuole	41.63	42.82
TraesCS4D01G225700.1	Wheat	vacuole	41.63	42.82
TraesCS4A01G067900.1	Wheat	vacuole	41.63	42.82
Os03t0246100-01	Rice	extracellular, vacuole	41.86	41.86
TraesCSU01G153100.1	Wheat	extracellular, vacuole	40.93	41.03
TraesCS7A01G069700.1	Wheat	extracellular, vacuole	40.93	41.03
Os06t0131500-01	Rice	plastid	42.79	40.98
HORVU1Hr1G011210.1	Barley	vacuole	40.93	40.93
TraesCS7D01G065400.1	Wheat	extracellular, vacuole	40.7	40.79
KXG38664	Sorghum	extracellular, vacuole	41.16	40.78
HORVU4Hr1G063240.7	Barley	golgi, vacuole	40.93	40.65
Bra012604.1-P	Field mustard	vacuole	37.44	40.55
Bra013297.1-P	Field mustard	vacuole	37.67	40.4
Bra000536.1-P	Field mustard	golgi, plasma membrane, vacuole	35.35	40.21
Bra021137.1-P	Field mustard	plasma membrane	35.81	39.9
GSMUA_Achr11P...	Banana	extracellular, plasma membrane, vacuole	36.51	39.65
Zm00001d036051_P001	Maize	extracellular, vacuole	38.37	38.73
HORVU7Hr1G012550.1	Barley	vacuole	39.77	38.26
KXG19201	Sorghum	plastid	38.84	35.99
Bra033641.1-P	Field mustard	extracellular, vacuole	35.35	35.19
Bra015166.1-P	Field mustard	extracellular, vacuole	38.37	34.88
Bra035561.1-P	Field mustard	extracellular, vacuole	37.21	34.78
Bra002927.1-P	Field mustard	extracellular, vacuole	36.98	34.34
TraesCS1A01G046000.1	Wheat	extracellular, vacuole	28.37	33.61
Bra011537.1-P	Field mustard	extracellular, plasma membrane, vacuole	37.67	32.02
Bra039852.1-P	Field mustard	vacuole	34.65	31.97
Bra007162.1-P	Field mustard	extracellular	33.02	31.56
Bra019084.1-P	Field mustard	endoplasmic reticulum, extracellular	36.05	31.44
Bra014747.1-P	Field mustard	extracellular	32.79	31.26
Bra036510.1-P	Field mustard	cytoskeleton, extracellular, plastid, vacuole	32.09	30.73
Bra003212.1-P	Field mustard	extracellular	31.86	30.51
Bra007161.1-P	Field mustard	extracellular	32.09	30.46
Bra001918.1-P	Field mustard	extracellular, vacuole	33.49	30.0
Bra005028.1-P	Field mustard	extracellular	31.16	29.91
Bra029639.1-P	Field mustard	vacuole	31.86	29.78
Bra037057.1-P	Field mustard	extracellular, vacuole	33.02	29.65
Bra028343.1-P	Field mustard	extracellular, vacuole	32.79	29.62
Bra032758.1-P	Field mustard	vacuole	33.02	29.58
Bra014979.1-P	Field mustard	extracellular, vacuole	32.09	28.87
Bra017659.1-P	Field mustard	vacuole	36.51	28.34
Bra026644.1-P	Field mustard	extracellular	32.33	27.97
Bra038969.1-P	Field mustard	extracellular, vacuole	32.09	27.33
Bra028988.1-P	Field mustard	extracellular, vacuole	36.05	26.96
Bra002805.1-P	Field mustard	nucleus, plastid, vacuole	30.23	26.42
Bra010330.1-P	Field mustard	cytosol	32.09	26.39
Bra011100.1-P	Field mustard	extracellular, plasma membrane, vacuole	30.47	26.1
Bra027207.1-P	Field mustard	plastid	31.63	25.76
Bra027421.1-P	Field mustard	extracellular, plasma membrane, vacuole	30.0	25.75
Bra039757.1-P	Field mustard	extracellular, vacuole	29.53	25.15
Bra016812.1-P	Field mustard	extracellular	29.77	24.66
Bra001245.1-P	Field mustard	vacuole	31.16	23.67
OQU92921	Sorghum	mitochondrion	42.09	16.54

Protein Annotations

KEGG:00500+3.2.1.39	Gene3D:3.20.20.80	MapMan:50.3.2	EnsemblPlantsGene:Bra028526	EnsemblPlants:Bra028526.1	EnsemblPlants:Bra028526.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005618	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005886	GO:GO:0005975	GO:GO:0007154
GO:GO:0008150	GO:GO:0008152	GO:GO:0009505	GO:GO:0009506	GO:GO:0009987	GO:GO:0016020
GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0042973	GO:GO:0046658	InterPro:Glyco_hydro_17
InterPro:Glycoside_hydrolase_SF	UniProt:M4EIB1	PFAM:PF00332	ScanProsite:PS00587	PANTHER:PTHR32227	PANTHER:PTHR32227:SF236
SUPFAM:SSF51445	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00025433FD	SEG:seg	:

Description

AT5G42100 (E=3e-192) ATBG_PPAP, ATBG_PAP | ATBG_PAP; glucan endo-1,3-beta-D-glucosidase/ hydrolase, hydrolyzing O-glycosyl compounds

Coordinates

chrA02:-:875710..877002

Molecular Weight (calculated)

45861.5 Da

IEP (calculated)

7.230

GRAVY (calculated)

-0.011

Length

430 amino acids

Sequence
(BLAST)

001: MASSQISFSL VCLALLFFSF PLTVTSIGIN YGQVANNLPP PKNVIPLLKS VGATKVKLYD ADPQALRAFS GSGFDLTVSL GNEYLAQMKD SDKARDWVKQ
101: NVQAYLPGTK IVAIVVGNEV LTSNQSDLSA ALFPAMQSIH GALVDCGLNK QIFVTTAHSL AILDVSYPPS ATSFRHDLLG TLTPILDFHV KTGSPILINA
201: YPFFAYEGNP KHISLDFVLF QPNQGFTDPG SNFHYDNMLF AQVDAVYHAL DAVGISYKKV PIVVSETGWP SNGDPQEVGA NCDNARKYNG NLIKMMMSKK
301: MRTPIRPDCD LTIFVFALFN ENMKPGPTSE RNYGLFNPDG TPVYSLGIKT SSSSSGGGSS SGSKNSTGGG GSSSSGGTTG GSPGAGGGGG IYTPENPSPD
401: YMSISSARVK FSTSHFWFIV SNLLLLSFYI

Best Arabidopsis Sequence Match ( AT5G42100.2 )
(BLAST)

001: MASSSLQSLF SLFCLALFSL PLIVSSIGIN YGQVANNLPP PKNVIPLLKS VGATKVKLYD ADPQALRAFA GSGFELTVAL GNEYLAQMSD PIKAQGWVKE
101: NVQAYLPNTK IVAIVVGNEV LTSNQSALTA ALFPAMQSIH GALVDCGLNK QIFVTTAHSL AILDVSYPPS ATSFRRDLLG SLTPILDFHV KTGSPILINA
201: YPFFAYEENP KHVSLDFVLF QPNQGFTDPG SNFHYDNMLF AQVDAVYHAL DAVGISYKKV PIVVSETGWP SNGDPQEVGA TCDNARKYNG NLIKMMMSKK
301: MRTPIRPECD LTIFVFALFN ENMKPGPTSE RNYGLFNPDG TPVYSLGIKT SSTHSSGSGS SNSTGGSSSG GGGNTGGSSS GGGIYQPVTG NPSPDYMSIS
401: SAGVTFSTLH FICCFTLTIF VDI

Arabidopsis Description

ATBG_PPAPGlucan endo-1,3-beta-glucosidase 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHX5]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.