Factsheet for Bra010330.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 2
cytosol 2
plasma membrane 2
extracellular 1
endoplasmic reticulum 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY14214	Canola	endoplasmic reticulum, extracellular, vacuole	93.88	95.71
Bra011100.1-P	Field mustard	extracellular, plasma membrane, vacuole	84.32	87.85
AT4G29360.2	Thale cress	vacuole	88.91	85.48
Bra002805.1-P	Field mustard	nucleus, plastid, vacuole	55.64	59.15
Bra035561.1-P	Field mustard	extracellular, vacuole	36.33	41.3
Bra026644.1-P	Field mustard	extracellular	38.43	40.44
Bra032357.1-P	Field mustard	extracellular, vacuole	28.68	39.68
Bra002927.1-P	Field mustard	extracellular, vacuole	34.42	38.88
Bra010800.1-P	Field mustard	vacuole	28.3	38.74
Bra015166.1-P	Field mustard	extracellular, vacuole	34.99	38.69
Bra019084.1-P	Field mustard	endoplasmic reticulum, extracellular	35.56	37.73
Bra000508.1-P	Field mustard	extracellular, vacuole	27.92	37.44
Bra039757.1-P	Field mustard	extracellular, vacuole	36.14	37.43
Bra023293.1-P	Field mustard	extracellular	29.25	36.96
Bra039852.1-P	Field mustard	vacuole	32.89	36.91
Bra000536.1-P	Field mustard	golgi, plasma membrane, vacuole	26.58	36.77
Bra036510.1-P	Field mustard	cytoskeleton, extracellular, plastid, vacuole	31.55	36.75
Bra021137.1-P	Field mustard	plasma membrane	26.77	36.27
Bra011537.1-P	Field mustard	extracellular, plasma membrane, vacuole	34.99	36.17
Bra027421.1-P	Field mustard	extracellular, plasma membrane, vacuole	34.61	36.13
Bra012604.1-P	Field mustard	vacuole	27.34	36.02
Bra007161.1-P	Field mustard	extracellular	30.4	35.1
Bra005028.1-P	Field mustard	extracellular	30.02	35.04
Bra012015.1-P	Field mustard	plasma membrane, vacuole	27.92	35.01
Bra033641.1-P	Field mustard	extracellular, vacuole	28.87	34.95
Bra013297.1-P	Field mustard	vacuole	26.77	34.91
Bra001918.1-P	Field mustard	extracellular, vacuole	31.93	34.79
Bra003212.1-P	Field mustard	extracellular	29.83	34.74
Bra016812.1-P	Field mustard	extracellular	34.42	34.68
Bra028343.1-P	Field mustard	extracellular, vacuole	31.55	34.66
Bra014979.1-P	Field mustard	extracellular, vacuole	31.55	34.52
Bra007162.1-P	Field mustard	extracellular	29.64	34.44
Bra014747.1-P	Field mustard	extracellular	29.64	34.37
Bra037057.1-P	Field mustard	extracellular, vacuole	31.36	34.24
Bra029639.1-P	Field mustard	vacuole	30.02	34.13
Bra017659.1-P	Field mustard	vacuole	35.56	33.57
Bra032758.1-P	Field mustard	vacuole	30.02	32.71
Bra028988.1-P	Field mustard	extracellular, vacuole	35.56	32.35
Bra028526.1-P	Field mustard	extracellular, vacuole	26.39	32.09
Bra038969.1-P	Field mustard	extracellular, vacuole	29.83	30.89
Bra001245.1-P	Field mustard	vacuole	31.36	28.98
Bra027207.1-P	Field mustard	plastid	21.03	20.83

Protein Annotations

KEGG:00500+3.2.1.39	Gene3D:3.20.20.80	MapMan:50.3.2	EnsemblPlantsGene:Bra010330	EnsemblPlants:Bra010330.1	EnsemblPlants:Bra010330.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	GO:GO:0016798	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	UniProt:M4D1I0	PFAM:PF00332
PFAM:PF07983	ScanProsite:PS00587	PANTHER:PTHR32227	PANTHER:PTHR32227:SF88	SMART:SM00768	SUPFAM:SSF51445
UniParc:UPI00025472AD	InterPro:X8	SEG:seg	:	:	:

Description

AT4G29360 (E=3e-254) | glycosyl hydrolase family 17 protein

Coordinates

chrA08:+:13897754..13899990

Molecular Weight (calculated)

56075.2 Da

IEP (calculated)

4.636

GRAVY (calculated)

-0.062

Length

523 amino acids

Sequence
(BLAST)

001: MSLFKTVAEL GAASNIGICY GRNADNLPSP NKVSELIQHL NIKFVRIYDY NIDVLKAFAN TNIELMIGVP NADLLAFAQF QSNVDTWLRN NILPYYPTTK
101: ITSISVGLEV TEAPDNATGL VLPAMQNIHT ALKKAGLDKK IKISSSHSLA ILSRSFPPSS ATFSKKHSAF LKPMLEFLVE NDSPFMIDLY PYYAYRDSAE
201: KVQLEYALFE SSSQVVDPAT GLLYSNMFDA QLDAVYFALT AMNFKSVKVM VTESGWPSKG SPKETAATPD NALAYNTNLI RHVIGDPGTP AKPGEEIDVY
301: LFSLFNENRK PGMESERNWG MFYANGTSVY ALDFTGESAV PGPVSPSNST TGVSPSPGDN GNSTVTIGGG GGGAKKWCVA SSQASVTELQ SALDWACGPG
401: NVDCSAVQPN QPCFEPDTVL SHASYAFNTY YQQSGGSSLD CSFGGVSVEV DKDPSYGNCL YMIAPSTDGM NRTMAGNITG NITAIDSPLA SPSTSNEGIR
501: QMVVSVAVSA LLPCFVVSLS LLW

Best Arabidopsis Sequence Match ( AT4G29360.2 )
(BLAST)

001: MGQRLNLVFW IFVSILAFLS MSLHSNPLLD FGMASKIGIC YGRNADNLPS PNRVSELIQH LNIKFVRIYD ANIDVLKAFA NTGIELMIGV PNADLLAFAQ
101: FQSNVDTWLS NNILPYYPST KITSISVGLE VTEAPDNATG LVLPAMRNIH TALKKSGLDK KIKISSSHSL AILSRSFPPS SASFSKKHSA FLKPMLEFLV
201: ENESPFMIDL YPYYAYRDST EKVPLEYALF ESSSQVVDPA TGLLYSNMFD AQLDAIYFAL TAMSFKTVKV MVTESGWPSK GSPKETAATP ENALAYNTNL
301: IRHVIGDPGT PAKPGEEIDV YLFSLFNENR KPGIESERNW GMFYANGTNV YALDFTGENT TPVSPTNSTT GTSPSPSSSP IINGNSTVTI GGGGGGGTKK
401: WCIASSQASV TELQTALDWA CGPGNVDCSA VQPDQPCFEP DTVLSHASYA FNTYYQQSGA SSIDCSFNGA SVEVDKDPSY GNCLYMIAPA TDGFNRTMAG
501: NITGNITAID SPLASPSSTN EAFRQMVVAV SVLLPCFVVC SSIW

Arabidopsis Description

O-Glycosyl hydrolases family 17 protein [Source:TAIR;Acc:AT4G29360]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.