Factsheet for Bra001918.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67322	Canola	extracellular	45.42	98.64
CDY53213	Canola	extracellular, vacuole	98.12	98.12
Bra028343.1-P	Field mustard	extracellular, vacuole	89.58	90.34
Bra014979.1-P	Field mustard	extracellular, vacuole	89.79	90.17
AT3G23770.1	Thale cress	extracellular	84.38	85.08
Bra037057.1-P	Field mustard	extracellular, vacuole	72.08	72.23
Bra032758.1-P	Field mustard	vacuole	69.79	69.79
Bra038969.1-P	Field mustard	extracellular, vacuole	69.38	65.94
KRH20365	Soybean	extracellular, vacuole	49.17	60.36
Solyc12g098560.1.1	Tomato	extracellular	53.12	55.56
Bra029639.1-P	Field mustard	vacuole	51.88	54.13
GSMUA_Achr8P08800_001	Banana	peroxisome, plastid, vacuole	42.08	51.93
EER99139	Sorghum	endoplasmic reticulum, plasma membrane	48.33	48.03
Zm00001d021024_P001	Maize	extracellular	47.92	48.02
GSMUA_Achr11P...	Banana	extracellular	43.75	47.84
Os08t0525800-00	Rice	extracellular, mitochondrion, vacuole	45.62	47.0
TraesCS7D01G257600.1	Wheat	extracellular, vacuole	45.62	46.6
HORVU5Hr1G075510.2	Barley	plasma membrane, vacuole	47.29	46.52
Os09t0502200-01	Rice	extracellular	46.46	46.46
EES14212	Sorghum	extracellular	46.25	45.87
GSMUA_AchrUn_...	Banana	extracellular, vacuole	43.33	45.81
Zm00001d031571_P001	Maize	extracellular	45.62	45.44
TraesCS7A01G256800.1	Wheat	vacuole	45.21	43.93
TraesCS7B01G153600.1	Wheat	vacuole	45.0	43.81
Os03t0845600-01	Rice	extracellular, vacuole	41.88	42.41
Bra001245.1-P	Field mustard	vacuole	49.58	42.05
TraesCS5D01G400400.1	Wheat	extracellular	42.08	40.89
Zm00001d004763_P001	Maize	extracellular	40.21	40.89
TraesCS5A01G390600.1	Wheat	extracellular	41.88	40.69
TraesCS5B01G279000.2	Wheat	extracellular	47.08	40.57
EER90524	Sorghum	extracellular	40.62	40.37
HORVU5Hr1G095380.1	Barley	cytosol	25.42	38.85
Bra023293.1-P	Field mustard	extracellular	31.46	36.47
Bra015166.1-P	Field mustard	extracellular, vacuole	35.83	36.36
Bra035561.1-P	Field mustard	extracellular, vacuole	34.58	36.09
Bra032357.1-P	Field mustard	extracellular, vacuole	28.33	35.98
Bra002927.1-P	Field mustard	extracellular, vacuole	34.58	35.85
Bra000508.1-P	Field mustard	extracellular, vacuole	28.75	35.38
Bra010800.1-P	Field mustard	vacuole	27.71	34.82
Bra005028.1-P	Field mustard	extracellular	32.29	34.6
Bra039852.1-P	Field mustard	vacuole	33.54	34.55
Bra019084.1-P	Field mustard	endoplasmic reticulum, extracellular	35.42	34.48
Bra021137.1-P	Field mustard	plasma membrane	27.71	34.46
Bra003212.1-P	Field mustard	extracellular	32.08	34.3
Bra012604.1-P	Field mustard	vacuole	27.92	33.75
Bra028526.1-P	Field mustard	extracellular, vacuole	30.0	33.49
Bra026644.1-P	Field mustard	extracellular	34.58	33.4
Bra014747.1-P	Field mustard	extracellular	31.25	33.26
Bra007162.1-P	Field mustard	extracellular	31.04	33.11
Bra012015.1-P	Field mustard	plasma membrane, vacuole	28.54	32.85
Bra007161.1-P	Field mustard	extracellular	30.83	32.67
Bra013297.1-P	Field mustard	vacuole	27.29	32.67
Bra036510.1-P	Field mustard	cytoskeleton, extracellular, plastid, vacuole	30.42	32.52
Bra002805.1-P	Field mustard	nucleus, plastid, vacuole	33.12	32.32
Bra000536.1-P	Field mustard	golgi, plasma membrane, vacuole	25.42	32.28
Bra010330.1-P	Field mustard	cytosol	34.79	31.93
Bra039757.1-P	Field mustard	extracellular, vacuole	33.33	31.68
Bra027421.1-P	Field mustard	extracellular, plasma membrane, vacuole	32.71	31.34
Bra011100.1-P	Field mustard	extracellular, plasma membrane, vacuole	32.29	30.88
Bra011537.1-P	Field mustard	extracellular, plasma membrane, vacuole	32.5	30.83
Bra033641.1-P	Field mustard	extracellular, vacuole	27.5	30.56
Bra016812.1-P	Field mustard	extracellular	32.71	30.25
Bra028988.1-P	Field mustard	extracellular, vacuole	33.75	28.17
Bra017659.1-P	Field mustard	vacuole	32.29	27.98
Bra027207.1-P	Field mustard	plastid	23.12	21.02

Protein Annotations

KEGG:00500+3.2.1.39	Gene3D:3.20.20.80	MapMan:50.3.2	EnsemblPlantsGene:Bra001918	EnsemblPlants:Bra001918.1	EnsemblPlants:Bra001918.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	GO:GO:0016798	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	UniProt:M4CCI8	PFAM:PF00332
PFAM:PF07983	ScanProsite:PS00587	PANTHER:PTHR32227	PANTHER:PTHR32227:SF122	SMART:SM00768	SUPFAM:SSF51445
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00025407A8	InterPro:X8	:	:

Description

AT3G23770 (E=1e-242) | glycosyl hydrolase family 17 protein

Coordinates

chrA03:+:19339709..19341366

Molecular Weight (calculated)

52648.5 Da

IEP (calculated)

7.782

GRAVY (calculated)

-0.115

Length

480 amino acids

Sequence
(BLAST)

001: MSSPMASFAL FFFTLIVLSS SCRYAIGSPN NKTFLSLASR IGINYGRFGN NLPSPYQSIN LIKSINAGHV KLYDADPETL MVLSQTNLYV TIMVPNNHII
101: PIGADQAAAD NWVNTNVLAH YPQTKIRFVL VGNEILSNNS DQDKQTWSSL VPAMRKIVTS LRARGIHNIK VGTPLAMDVL RTSFPPSSGA FREEVAALVM
201: LPLLKFLNGT NSFFFLDVYP YFPWSTDPVN NPLDFALFQS NSTYTDPQTG LVYTNLLDQM LDSVIFAMTK LGYPNVRLAI SETGWPNSGD IDETGANILN
301: AATYNRNLIK KMTANPPLGT PARPGSPIPT FLFSLFNENQ KPGSGTERHW GILKPDGTQI YEIDFSGTRP VPSPGSLPKP SNNVPFKGNV WCVAVEGASE
401: AELQQALNFA CGQSNATCAA LAPGRECYAP VSLTWHASYA FSSYWAQFRN QSSRCYFNGL ARETTTNPGN EHCTFPSVTL

Best Arabidopsis Sequence Match ( AT3G23770.1 )
(BLAST)

001: MTPFALFLFT LLALSSSCCS AIGPQNNRTV LALASRIGIN YGKLGNNLPF PYQSINLIKT IKAGHVKLYD ADPETLKLLS TTNLYVTIMV PNNQIISIGA
101: DQAAADNWVA TNVLPFHPQT RIRFVLVGNE VLSYSSDQDK QIWANLVPAM RKVVNSLRAR GIHNIKVGTP LAMDALRSSF PPSSGTFRED IAVPVMLPLL
201: KFLNGTNSFF FLDVYPYFPW STDPVNNHLD FALFESNSTY TDPQTGLVYT NLLDQMLDSV IFAMTKLGYP NISLAISETG WPNDGDIHET GANIVNAATY
301: NRNLIKKMTA NPPLGTPARR GAPIPTFLFS LFNENQKPGS GTERHWGILN PDGTPIYDID FSGRRSFSGF DSLPKPSNNV PFKGNVWCVA VDGADEAELG
401: QALNFACGRS NATCAALAPG GECYAPVTVT WHASYAFSSY WAQFRNQSSQ CYFNGLARET TTNPGNERCK FPSVTL

Arabidopsis Description

Beta-1,3-glucanase [Source:UniProtKB/TrEMBL;Acc:Q9LK41]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.